Maniola jurtina (meadow brown): 123871818
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Entry
123871818 CDS
T09254
Name
(RefSeq) TATA-binding protein-associated factor 172 isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
mju
Maniola jurtina (meadow brown)
Brite
KEGG Orthology (KO) [BR:
mju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mju03021
]
123871818
Transcription machinery [BR:
mju03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
123871818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
TOR1L1_N
ResIII
HEAT
TPR_Trm732_C
HEAT_ECM29
HEAT_EF3_N
Vac14_Fab1_bd
Motif
Other DBs
NCBI-GeneID:
123871818
NCBI-ProteinID:
XP_045771753
LinkDB
All DBs
Position
14:12055073..12085906
Genome browser
AA seq
1899 aa
AA seq
DB search
MTSRLDRLFVLLEAGAGVATRRAAALQLGEVQRAHPEELHRLLARLMQHLRATAWETRVA
ATQAVEAILSKVPEWHPPPFATKEEEVEQDDNGRLRCESFDIKQVLEHGAHLMGSEGHEY
DLEEEALAAIDMKERLVKQRQQLNSRLGLDVAASLGMDMSAVYSNDDLLPLKAPTKSEVT
RRPVQELMSKGLSSREMNLAKRKARAAFSKQKSRDCDDAPPAPAPLTPTTPSAPILTPLE
PERKKIKLEPAEELPDITCGGCAVPGRDGQWGEGSRWPLDAWCSALQAQLVSAAWEARHG
AASALRELLRSPLAASAGHRAGMTPQQMEDAHQEWLEDMALRLLCVLALDRFGDFVSDQV
VAPVRETCAQTLGVTLAQMRAARVRLVAERVATLARQPQWEARHGALLAFKYLLAARQEL
AVECGALEYLMAGLEDGAEDVSGVAAGALAPAAAALAAARPERLARLAARLWQLLRDQDD
LATPANAYMALLASLMALPAAATKLHPIDLTDVLPRLWPYLDHSASSVRKATLQTLRTLT
RPLITSEINGKTNTNNNIECENKCNSKVNCSESESEVKNSEKCNGEVSQYLMWTPELLQE
AMRHIYQRVLFEHVPEIQEIAVQVWQNLLRHASLGTILVAACPMLALWLCLAMQPARLPL
DASLLLNPPPPPEPKERRTRTTSGPSSTDSEARPGQKWYLGGNESQPVALRDAAVTRARC
LAAEILGYLSCYLVQPAPGIEYKAEDESPIDCYVKVMVVYLRSGSALQRLVAGLVISSWA
RHTLQHRLFPPPVLTNGVTNEDESSLRKDDTEEQQMELLSKLAPPLLITTLHTSLNQTLY
YDEVALNCNRILQEARDLLAMMKHYKLPIDNEEFNNIIRLEQVSAMTAVTQPLVAAMKAK
RVAPSLEERRAALHSAVANCALEQATLNVSVQAALSSAVAQLAALPERLNPVVRPLMESI
KKEASEELQRGSARTLAALLAQLVHRQPCPNNKVLVNLKAFLRCDPEYTPRISLENAEEA
NGDSGSGGDSGTESKTETLSSHGPTLDKFDGIITLREQHRSAERVVPRRGRPPAAHTQQH
SHGEFSIDQLFPNEDEARKLLRIQRRGATMALTSLTEYFGDKLPEKLPKLWEFITEPFEK
VMTDSELESLEEEAAEELISRLQVVEAVAGAVGKGLWPKLLNGVRACAALARAKYTALRH
MAARAMAALAAREPHAVMDTLVHELIEALSEMRNDRVRCGAAESLVRVVDCLQLQLVPYI
VLLVVPLLGRMSDHNESVRMMSTRCFATLIQLMPLDGAVPEPAGLSQEMRERKLRDKHFL
EQLFNPKSIKDYKIPIPVSAELRSYQQAGVNWLRFLNEYKLHGVLCDDMGLGKTLQSIVV
VAGSHHERKLRGDPAMPSLVVCPPTLTGHWVFEVNKFIPTKFLKPLQYVGPPAERERLRS
HVHFYNLIVASYDIVRKDIDYFSSIKWNYCVLDEGHVIKNGKTKAFKAIKQIVANHRLIL
SGTPIQNNVLELWSLFDFLMPGLLGTERQFTARYSRPILAARDPRAPPHHLQAGALACEA
LHRQVLPFLLRRVKEDVLRELPPKITQDYYCDLSPLQRRLYEHFSREHMPQDLESSRTHV
FQALHYLQNVCNHPKLVLVPEHPEAMRVAKQLASQSSSLDDIEHGAKLPALKQLLLDCGI
GTSATVGDSAAVVSQHRALIFCQLKKMLDIVEKDLLQKHLPSVTYLRLDGSVPPHQRHAI
VTRFNTDVSIDVLLLTTAVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKRVV
NVYRLITRDTLEEKIMGLQKFKLMTANTVISSENAAMETMGTDQLLDLFQTSASAGPSTS
HQQPPKPAISNLPDLWDDKQYEEEYDMSTFVKSLKKMKA
NT seq
5700 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgcggttagatcgcttgttcgtgctgctggaggcgggcgcgggtgtggccacg
cggcgcgcggcggcgctgcagctgggcgaggtgcagcgcgcgcaccccgaggagctgcac
cgcctgctcgcgcggctcatgcagcacctgcgcgctaccgcctgggagaccagggttgcc
gccacgcaggctgtggaggcgatcttatcaaaagttccggagtggcatccaccgcccttt
gctaccaaagaggaggaagtagagcaagatgacaacgggcggctgcggtgcgagtcgttt
gatataaagcaggtcctggaacacggcgcgcatctgatgggctcggaagggcacgagtat
gacctcgaggaagaagcacttgcagctatagatatgaaggagcgtttggtgaagcaacgc
cagcagctgaactctcggctggggctggacgtggcggcatcgctgggcatggacatgagt
gcggtgtactccaatgatgatttgttacccctgaaggcacccaccaaatccgaagttact
agaaggccagtccaagagttgatgtccaaaggtctcagctcgcgcgagatgaacttagcg
aagcgcaaagcgcgcgctgcgttcagcaagcagaagtcgcgcgactgcgacgacgcgccg
cccgcgcccgcgccgctcacgccgaccacgcccagcgcgccgatactgacgcctctcgag
ccggagaggaaaaagatcaaactcgagcccgctgaagagcttccggacatcacgtgcgga
ggttgcgcagtaccgggacgcgacggacagtggggcgagggttcccgctggccgctggac
gcgtggtgcagcgcgctgcaagcgcaactcgttagcgcggcgtgggaggcgcggcacggc
gctgctagtgcactgagggagctgctgcgatcacctttagcagcttccgcggggcatcgg
gccggcatgacgccgcaacagatggaggatgcacatcaagaatggttagaagacatggca
ctgaggctgctgtgtgtactcgctttggatagattcggtgacttcgtatcggatcaggta
gtggctccagttcgggagacgtgtgcgcagacgctgggagtgacgctggcgcagatgcgc
gcagcgagggtccggctggtggcggagcgcgtggccacgctcgcgcgccagccgcagtgg
gaggcgcggcacggcgcgctgctcgccttcaagtatttgctggcagcgagacaggaacta
gcagtagaatgcggagccctagaatacttaatggctggtctagaagacggggccgaggac
gtatcaggggttgcagcaggagccctagcgcctgctgcggcggccttagcagcggccaga
cctgagcgactcgcgcgactggcggcgaggctgtggcaactgttgcgtgaccaggacgac
ctggccaccccggccaatgcatacatggcacttttagcttcgttaatggcattgcctgct
gctgctactaagttacatcccatcgatttgacagacgttctaccgagactatggccatac
ctcgaccactcggccagctccgtacgaaaagcaactctacaaaccctacgcaccctcacc
agaccgctcattacctcagaaattaacggcaaaacgaatactaacaataacatagaatgt
gaaaacaagtgtaattcgaaagtgaattgtagtgaaagtgaaagtgaagtgaaaaacagt
gaaaagtgcaacggtgaagtgagtcagtacctgatgtggacgcctgagctattgcaagag
gcgatgcggcatatataccaaagggtgctttttgagcatgttcctgaaatacaagagatt
gcagttcaggtgtggcagaacttgctacgtcacgcgtctctgggtacaatcctggtggcg
gcgtgtccgatgctggcgctgtggctgtgcctcgcgatgcagccggcgcgcttgccgctg
gacgcgtcgctgctgttgaacccgccgccaccgcctgaaccaaaggagcgacgaactcgc
accacttcgggcccaagcagcacagatagcgaggcgcgtccggggcagaagtggtacctc
ggcggcaacgagtcccagccggtggccttgagggatgcggcggtcacgcgagcgagatgt
cttgctgcggagattttaggttatctatcgtgttatctagtccagccggcacccggcatt
gaatacaaagcagaagacgaaagtcctatcgattgttatgttaaggttatggtagtgtac
ttgcgctccggcagcgcgctgcagcgcttggtggcggggctggtgatatcgtcgtgggcg
cgccacaccctgcagcaccggctcttcccgccgcccgtgctcactaacggcgttactaat
gaggacgagagcagtctccggaaagacgatacagaggagcagcaaatggagttattgtcc
aaactggcaccgcctctactcatcaccactctacatacatcactgaaccaaactttatac
tacgacgaagtcgccttgaattgtaataggatactgcaagaagctcgagatctgttagcc
atgatgaaacattacaaactacccatagacaatgaggaattcaataatattataaggctc
gaacaggtgtccgccatgacagcggtgacgcagcccctggtggcggcgatgaaagctaaa
cgcgtggcgccgtcgttggaggagcgtcgcgccgcactacattctgcggtcgctaactgc
gcgcttgaacaagccaccttgaatgtctcagtccaagcagcgttaagcagtgcggtggcg
caactagccgctttaccggaacgactcaacccagtagtccggcctctgatggagagcatc
aagaaggaggcttcggaggagctgcagcgaggctcggcgaggacgttagctgctctactc
gctcaactcgtccaccggcagccctgtcccaacaacaaagttctggtcaaccttaaagcc
ttcctcagatgcgatcccgagtatacgccgcgtatatctcttgaaaacgctgaggaagcg
aacggtgattccggcagcggcggcgatagcggcacggagagcaaaactgaaacactttct
agtcacggacccactctggataagttcgacggcatcataacactgcgcgagcaacaccgc
agtgcggagcgagtggtgccgcgccgcgggcggccgcctgccgcccacactcagcagcac
agccacggggagttcagcatcgaccaactcttccccaacgaagacgaggcacgaaagttg
ttgaggatacaacggcgaggtgcgacaatggcgttaactagtctgacggagtattttggg
gacaaactgcctgaaaaattgcccaagctgtgggagttcatcactgaacctttcgaaaaa
gttatgactgatagtgagctggaatctctagaagaagaagcggcagaggaactaatatct
cgactgcaagtagtggaagcagtggcgggggcggtgggcaaagggctctggccaaagctg
cttaatggcgtgcgtgcgtgtgcggcgctcgcgcgggccaagtatacggcattgcggcac
atggcggcgcgcgctatggcggctttggctgcgcgggagccgcatgcggttatggatacg
ctggttcacgagttaatcgaggcattgtctgagatgcggaacgaccgcgtgcgttgcggc
gcggcggagtcgctggtgcgcgtggtggactgcttgcagctacaacttgtgccctatatc
gttctgctcgtcgtgcctcttttaggacgcatgagtgaccacaacgaatccgtccgcatg
atgtcgacgcgatgtttcgcgactctcatacaattgatgcctttggacggagcggtgccc
gagcccgccggcctctcccaggagatgcgggagaggaagctgagggacaagcacttcttg
gagcaactcttcaacccaaagtccattaaagactacaagatccccataccagtgtctgcg
gaactaaggagctaccagcaggcgggtgtgaactggcttcggtttctaaacgaatacaaa
cttcatggggtattatgcgatgacatgggtctgggcaaaacgctgcaatccatcgtggta
gtggcaggctcgcaccacgagcggaaactgcgaggcgaccccgctatgccttctctcgtc
gtgtgccctccaacgctcactggtcattgggtatttgaagtgaacaaattcatacccacc
aaattcctcaaacccctccaatacgtgggtccgcccgcagaaagagaaagactgcgctct
cacgtacacttctacaacctcatcgtagcttcgtacgacatcgtgcggaaggacatagac
tactttagcagtatcaagtggaactactgcgtgttggacgaaggccacgtcataaagaac
gggaagaccaaagccttcaaggccatcaagcagattgttgctaaccatcgattgatactc
tcggggacgcccattcaaaacaacgtcctggagctgtggtcgctgttcgacttcctgatg
ccaggactgctgggtaccgagcggcagttcactgcgcgatactcgaggcccatcttagcc
gcgcgagacccgcgcgctccgcctcaccaccttcaggccggggctctggcttgcgaagcc
ctgcatcgacaggtgcttccatttctcctgcgtcgcgtgaaagaggatgtattacgcgag
ttgccgccaaagatcacacaggactactactgcgacctcagccctctacagcggcgcctc
tacgagcacttctctcgcgaacacatgccgcaggacctcgagtcttcccggacccatgtg
ttccaggctctgcattatttacaaaacgtttgcaaccatcctaaactggtgttagtaccg
gagcacccggaggcgatgcgcgtcgccaagcagctggcctctcagagctcttccctggac
gacatcgaacacggcgccaaactgcctgcgctcaaacaattactactcgactgcggcatt
ggcacatcggcaacagtcggcgactccgctgcagtggtctcccagcaccgagcgttaatc
ttctgtcagctcaagaagatgttggatatagtagagaaggacctgttgcagaagcacttg
ccgtcagtcacgtacttgcggctggacggcagcgtgccgccgcatcagcgccacgcgata
gtgacgcgcttcaacaccgacgtgtccattgacgtgctgctgctcaccactgctgtgggt
ggtctagggctgaacctgacgggcgcagacacggtgatcttcgtagagcacgactggaac
cccatgaaggatctgcaagccatggaccgcgcgcatcgcatcggacagaagcgagtcgtc
aacgtctaccgtctcatcaccagggatactctggaggagaagattatgggactacaaaaa
ttcaagctaatgacggcaaacacggtgattagcagtgaaaatgcggccatggagaccatg
ggcacagaccagcttctcgacctgttccaaacgtcagcctcggccggaccctccacgtcg
caccagcaaccccccaaacccgcgataagcaacctcccagacttgtgggacgataagcag
tacgaggaggaatacgatatgagcacgtttgtcaagagccttaagaaaatgaaagcttag
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