Maniola jurtina (meadow brown): 123871820
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Entry
123871820 CDS
T09254
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
mju
Maniola jurtina (meadow brown)
Pathway
mju04140
Autophagy - animal
mju04142
Lysosome biogenesis
mju04145
Phagocytosis
mju04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mju00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
123871820
04142 Lysosome biogenesis
123871820
04140 Autophagy - animal
123871820
04148 Efferocytosis
123871820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mju04131
]
123871820
Membrane trafficking [BR:
mju04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
123871820
Hops complex
123871820
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
DUF4562
zf-RING_11
zf-C3HC4_2
HFX_2341_N
TPR_YpiA
zf-RING_Vps41
zf_RING_Vps8_fungal
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
123871820
NCBI-ProteinID:
XP_045771756
LinkDB
All DBs
Position
14:12246475..12276836
Genome browser
AA seq
987 aa
AA seq
DB search
MTSIFDQYEQASQISQRSVPVSEQMTSSGYINMQLEDNTPMFSKQKMNFNPSDLITHVAV
SSDFLVLAMANGKLFRLDLKMPDQHEEIHYAKFVQPNSKLTAIFLDPLGYHLLMAFAARN
KEGSPELVYLHRKSIKLKPVTKSKNYEVTEVGWNYENKSLTTTGPILLGTSQGHILETEL
EAESDKMFTASQQYWRQLPTYLPIYGGKEIDGLIFDIGRGMNTPITGIQFHRVGNTSKFF
IFVTTPTRLYQFIGHAMMADDKPSLQSIFHPYLTTPETGFQEIPSTLKYSKLQFYFDKNN
TPRTFAWLTEPGIFYGQLDPTSQQNSNSLFTQSELINYPSDKDSSEETTPLSFVLTEFHA
LLMFSDRVKAVSLLNQELVYEDKYSEVHGKLKNIVQDPIRKTIWAVTDKAVFRYKVKREE
RNVWRIYSDKEQFDLAKLYCQNNPAFIDIINVKQAELLFNKGDYDRSAEIYAETQSSFET
VCLKFLEVDQVNALKVYLGKRLEALEDDKTLISMIVIWMTELYLSQLGSLRRTGKAESQE
YYQIQSDFEVFLLQPKVVKCMQHIKSVIYDLMSSHGDKDNLIKLTMINEDYENVIAQHIY
KKSYMEALKMLQSKKRPELFYQFASTLMEEIPSQTATALIAQGPLLNPTKLLPAFLSCEN
DEVHISEIIRYLEFMLQNFNVKDKAIHNYLLTLYVEYDQGALMKYLTRQGQEIVLVNYDV
HYALRLCREKGLSEACVKLSTLLGLWESAAELALEVDLTLAKSVANMPDDESLQRRLWLG
IAEHVITKNQDIKEAMSLLEECPLIKIEDILPFFSDVVTIDHFREPICQSLEEYNKQIEE
IKAEMEEATNSAECVRNEIQSFRNRSVLVSVSDACCLCDIALLLRPFYLFPCAHRFHSDC
LMAEMQPILAPAKRNKLTDLQRKLKVLPSIELNTVTSSGLPLKEVLKNEMDDIVASECVF
CGEHMITCIDKPFIADEDWDRVMKEWE
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgatttttgatcaatacgagcaggcgtctcagatttcccagcgctcagtgcca
gtgtctgaacagatgacgtcgtcgggctacatcaatatgcagttggaagataatacacca
atgttttctaaacaaaagatgaattttaacccatctgacctgatcacccatgtagcggtg
tctagtgacttcttggtcctggctatggctaacggaaagctgttcaggcttgatttgaag
atgcctgatcaacatgaagaaatccattatgcgaaattcgtgcaaccaaactcaaaactc
acagccatattcctggacccattgggttaccatctgctcatggcttttgctgctcggaac
aaagagggtagccctgagttagtctatctgcatcgtaagagcatcaaacttaaaccagta
accaagtctaagaactatgaggtaacagaagttgggtggaactatgagaacaagtctttg
acaaccacaggtcctatactgctaggtacttcgcaaggacatatacttgaaactgagttg
gaagcagagagtgataagatgtttacagctagccagcaatattggagacagctgcctact
tatcttcctatttatggaggcaaggagattgatggtttgatattcgacatcggtagaggc
atgaacacgcctatcacaggcatacaattccaccgagtcggaaacactagtaaattcttc
atcttcgtcaccacacccaccaggctctaccagttcataggccacgctatgatggctgac
gacaaaccttccctacagtctatatttcatccgtatctcactactccggagactggattc
caggaaataccttccacattgaaatattccaagttacagttctattttgataagaataat
actccaaggacgtttgcgtggttgactgaaccgggcatattttatggacagctagatcca
acatcacaacaaaactcaaattcactctttacccaaagcgaactcataaactatccatcc
gataaagattcaagtgaagaaacaacaccactgtcatttgtactgaccgaatttcatgct
ttactcatgttctctgatagagtcaaagctgtttcacttttaaaccaagaactagtctac
gaggataaatattcagaagtccacgggaagttaaagaatatagtacaagatcccataaga
aagacaatatgggcggtcacagataaagcagtttttagatacaaagtcaaaagagaggaa
cgaaatgtatggaggatttattccgacaaagaacagtttgatctagcaaaactttattgc
caaaacaatcctgcattcatcgatatcattaatgttaaacaggcagaattactcttcaat
aaaggggattatgatagaagcgcagaaatatatgcagagacccaaagcagttttgaaacg
gtatgcctaaaatttttggaagtcgatcaagttaatgctctaaaagtctatttaggaaag
agactagaggctttagaggatgataaaactctaatttccatgatagttatttggatgacg
gaactgtatttatcacaactcgggtcgttacgacgtacggggaaggcagaatcgcaggag
tactatcaaattcaaagcgatttcgaagtttttctcctgcaaccgaaagtcgtaaaatgt
atgcagcatataaaatctgttatctacgacttgatgtcttctcatggtgacaaagataat
cttattaaactaacgatgattaatgaagattatgaaaacgtgatagcccagcatatatac
aagaagtcgtatatggaagcgctgaaaatgcttcagtctaagaaaagacctgaattgttc
taccagttcgcgtcaacgcttatggaagaaattccttctcagaccgccactgctttgata
gctcaaggccctttactgaatcctactaaacttttaccagcctttttgtcctgtgaaaac
gatgaagttcatatttcggaaattattaggtatttggagttcatgctccagaattttaac
gtgaaggataaggcgatacataattatctgttgactttgtatgtggaatacgatcaggga
gcgttgatgaagtatttgacgagacaggggcaggaaattgtgctggttaactacgacgtt
cattatgcgttgaggctctgcagagagaagggtttgtcagaagcgtgcgtaaagctatca
actctgctggggctgtgggagtcggccgcggagttggcgttagaagtggacctgactctg
gcgaagagcgtcgccaatatgccggacgatgagagcctgcaaaggaggctttggctcgga
atagccgaacacgtgataaccaagaaccaagacatcaaggaagcgatgagtttactagaa
gaatgtccgctcatcaagatcgaggatatcctgcccttcttcagcgacgtggtcaccatc
gaccacttccgagagcccatttgccaatccttggaggaatataacaaacaaatagaagag
attaaagcagaaatggaggaggccactaattctgctgaatgtgtccgtaacgaaatccaa
tcgttccgtaaccggagcgtgctagtgtcggtgtcggacgcgtgctgcctgtgcgacatc
gcgctcctgctgcgccccttctacctgttcccctgcgctcacaggttccacagcgactgt
ctcatggctgagatgcagcccatactggcgccggccaaacgcaacaaactaacagatcta
caacgcaaactgaaagttctccccagcatagaacttaacacggtcacttccagcgggttg
cctctcaaggaagtgctgaagaatgaaatggatgatattgtggcgagcgagtgtgtgttc
tgtggagagcacatgatcacttgtattgacaaaccgttcattgctgatgaagactgggac
cgagtgatgaaggaatgggagtga
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