Maniola jurtina (meadow brown): 123872267
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Entry
123872267 CDS
T09254
Name
(RefSeq) pre-mRNA-processing-splicing factor 8 isoform X1
KO
K12856
pre-mRNA-processing factor 8
Organism
mju
Maniola jurtina (meadow brown)
Pathway
mju03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mju00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123872267
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mju03041
]
123872267
Spliceosome [BR:
mju03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
123872267
Complex C
U5 SnRNP specific factors
123872267
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
123872267
NCBI-ProteinID:
XP_045772395
LinkDB
All DBs
Position
15:complement(3218057..3253208)
Genome browser
AA seq
2364 aa
AA seq
DB search
MSLPPYLLGPNPWATMMAQQQLAAAQQAALQAHAAATAAAPPVPPTQPPKPHHISEEKIK
DKAQKWLQLQSKRFAEKRKFGFVDAQKEDMPPEHIRKIIRDHGDMTSRKYRHDKRVYLGA
LKYMPHAVMKLLENMPMPWEQIRDVRVLYHITGAITFVNEIPWVIEPVYIAQWGTMWIMM
RREKRDRRHFKRMRFPPFDDEEPPLDYADNILDVEPLEPIQIEMDPDEDAAVASWFYDHK
PLLNTRHVNGSTYRKWNLTLPQMATLYRLANQLLTDLVDDNYFYLFDSKSFFTAKALNMA
IPGGPKFEPLVKDNSAGDEDWNEFNDINKIIIRQPIRTEYRIAFPYLYNNLPHFVQLSWY
HTPNVVYIKTEDPDLPAFYFDPLINPISHRHTVKSLDPVPEEEDFLLPEEVSPFLQETAL
YTDNTANGIALLWAPRPFNMRSGRTRRAIDVPLVKTWYKEHCPPGQPVKVRVSYQKLLKY
YVLNALKHRPPKPQKKRYLFRSFKSTKFFQTTTLDWVEAGLQVCRQGYNMLNLLIHRKNL
NYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLIVDSHVQYRLNNVDSFQ
LADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVSKGPGCGFWAPG
WRVWLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRASVMHDI
VDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPTPIENMILRYVKMKADWWTNT
AHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYISPEEAVAIYTTT
VHWLESRRFAPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDN
PHEALSRIKRHLLTQRTFREVGIEFMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKR
RLLPPWVKPADTEPSPLLVYKWCQGINNLQDVWEVGEGECNVLLESRFEKLYEKIDLTLL
NRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIVQYYGLVLDLLVL
GLQRASEMAGPPQLPNDFLSYQDRAAEQAHPIRLYCRYIDRIHIFFRFTAEEARDLIQRY
LTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTIQWENS
FVSVYSKDNPNLLFNMAGFECRILPKCRSQHEELSHRDGVWNLQNEVTKERTAQCYLRVD
DESLARFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCEN
KIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHF
RSGMSHDEDQLIPNLYRYIQPWEAEFVDSQRVWAEYALKRQEANAQNRRLTLEDLEDSWD
RGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTD
MIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRR
FTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKVHESIVMDL
CQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFSAYKWNVSRPSLLADTKDTMD
NTTTQKYWLDIQLRWGDYDSHDVERYARAKFLDYTTDNMSIYPSPTGLLIAIDLAYNLHS
AYGNWFPGCKPLIQQAMAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGELFS
NQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRL
GQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPF
QACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNTERTKVL
LKPDKTTLTEPHHIWPTLTDDDWIKVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILG
MEISAPSAQRQQIAEIEKQSKEQSQLTATTTRTVNKHGDEIITSTTSNYESQTFSSKTEW
RVRAISATNLHLRTNHIYVSSDDIKESGYTYILPKNLLKKFVTISDLRAQIACYLYGTSP
PDNPQVREVHCAVLPPQWGTHQTVHLPRQLPKHPALAHLQPLGWMHTQPNELPQLSPQDI
TSHAKIMSENPTWDGEKTIIITCSFTPGSCSLTAYKLTPSGYEWGAKNTDRGNNPKGYLP
SHYERVQMLLSDRFLGYFMVPSQGSWNYNFMGVRHDPNMKYGVQLGNPREFYHEVHRPAH
FMNFAAMEDATAPTLAADREDHFA
NT seq
7095 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgccgccgtacctcttggggcccaacccctgggccaccatgatggcccagcag
cagctggcggcggcgcaacaagcggctctgcaggcgcacgctgccgccacggccgcggcg
ccccctgtgccgccaactcagcctcccaaaccacatcatatatcagaggagaagatcaag
gataaagctcaaaaatggctccaactgcagtcaaagcgttttgccgaaaagagaaaattt
ggtttcgtggacgctcaaaaagaagacatgccacctgagcatattcgcaaaatcattcgc
gaccatggtgacatgaccagtcgtaaatacaggcatgacaaaagagtatacctcggagcc
ctaaaatacatgccccatgctgttatgaagctgttagaaaatatgcctatgccttgggaa
cagattagggatgtacgagtcctttaccatattacgggtgcaataactttcgtgaatgaa
atcccatgggtcattgagccagtatacatagcacagtggggtactatgtggattatgatg
agaagagaaaagcgcgatcgacgtcatttcaaacgtatgcgcttccctccattcgatgat
gaggaaccaccgttagattacgctgataacatcttagatgtagaacccttagagccaatt
caaatagaaatggacccagatgaagatgccgcagttgcctcatggttctacgaccacaaa
ccactattaaacacgagacatgtaaacgggtcaacttacagaaaatggaacttgacttta
ccccaaatggcaactctgtaccgacttgcgaatcaattgctcacagacctggtcgatgat
aactatttctacctatttgattcaaagagtttcttcactgccaaagctttaaatatggca
atacctggtggtccaaagtttgagcccctggtgaaggataattcagctggtgacgaagat
tggaatgagtttaatgacatcaataagattatcattcgtcagccaatcaggacagagtac
aggatcgcttttccatacctgtacaacaacttgccacatttcgttcaactgtcttggtat
cacactccaaacgtggtatacatcaaaacagaagaccctgacttaccagcgttctacttt
gatcctctcatcaatccaatatcccatagacatactgtgaaatctctagacccggtacca
gaagaggaagatttcttactcccagaagaagtgtctccattcctacaagagacagctttg
tatacggacaacactgccaatgggattgcactgttgtgggctccaagaccattcaatatg
agatcaggtcgcacacgccgagccatcgatgtccctctagtaaagacgtggtacaaagag
cactgcccgcccggccagcccgtcaaagtgcgcgtgtcgtaccagaagctactcaagtat
tacgtgctcaacgcgctcaagcatcgaccgcccaaaccacagaagaagaggtacctcttc
cgttcgttcaaatcgacgaagttcttccaaaccacaaccctggattgggtggaagctggt
ctgcaggtgtgcaggcaagggtacaacatgctcaacctgctcatccacaggaagaatctg
aactacttgcatttggactataacttcaacttgaaacctgtgaagactctcaccactaag
gagagaaagaagtcccgcttcggtaacgcgttccacttgtgccgtgagatcctccggttg
acgaagctgatagtggactcgcacgtccagtaccgcctgaacaacgtggactccttccaa
ctggccgatggtcttcagtacatcttcgcacacgtcggccagctgactggaatgtacaga
tacaagtacaagctcatgcggcagatcagaatgtgcaaggacttgaaacatctgatttac
taccggtttaatacgggtcccgtatcaaaaggcccaggctgtggcttctgggctccagga
tggcgtgtgtggcttttcttcatgcgcggaatcacgccactgctcgagagatggcttgga
aacctgctttccaggcagtttgaaggcagacattccaaaggagtcgcaaaaactgtgaca
aagcagcgcgtggaatctcacttcgacctcgagttgcgagcgtcagtgatgcacgacata
gtggacatgatgccggagggcatcaagcagaacaaggcgcggaccatcctgcagcatctg
tccgaggcctggcgctgctggaaagccaacataccttggaaagtgcctggcctcccaacg
ccaatcgagaacatgattctccgatacgtgaaaatgaaagcggattggtggactaatact
gcgcattacaaccgcgagaggatccgccgcggcgccacagtcgacaagaccgtgtgcaag
aagaacctgggtcgactcactaggctctacttgaaggctgagcaagagagacagcataac
tatctcaaggacggtccatacatctcgcccgaggaagccgtagcaatctacacgacaacc
gtccactggctggaatcgcgtcgtttcgcacccattccgttcccgcctctctcgtacaag
catgacaccaaactccttatcctggccttggagcgattgaaagaggcctacagtgtcaag
tccaggcttaaccagagtcagagagaggagttgggcctcattgaacaggcctacgataat
ccccacgaggccttgtcgaggatcaagcgtcatttactcactcagaggactttccgagag
gtgggcatcgaattcatggacctatactctcatctggtgccagtgtacgacgtggaaccg
ctggagaagataacagacgcctacctagaccagtatctgtggtacgaagcagacaagcgg
cgcttgttgccaccctgggtgaagcctgccgacaccgagccatctccattactggtgtat
aagtggtgtcagggtatcaacaacttgcaagacgtgtgggaggtcggcgagggcgaatgc
aacgtgctgctcgagtcgcgtttcgagaagctgtacgagaagatcgatctgacgctgctc
aatcgactcctgcgattgatcgtcgatcacaacatcgccgactacatgaccgcgaagaac
aacgtggttattaactacaaggacatgaaccacacgaactcctacggaatcatacgtggt
ctccaattcgcgtcgtttatagttcagtactacggactcgtgttggatctccttgttttg
ggtctgcaaagagcgagcgagatggcaggacctccacaattgccgaacgatttcctctcg
taccaagacagagcggcggagcaggcgcatcctatacgactgtactgccgatatatcgac
aggatacacattttcttcaggttcaccgcagaagaagcgagagacctgatccaacggtac
ctgacagagcatccagatccaaacaacgagaacatagtcggctacaacaataagaaatgc
tggccgagagacgcgaggatgcgactaatgaaacacgatgtcaatttaggtcgcgcagtg
ttctgggacatcaaaaaccgtctaccgcgctctgttaccacgatacagtgggagaacagc
ttcgtctctgtctactccaaggacaatcctaaccttctgttcaatatggcgggcttcgag
tgcagaatattgcctaagtgccgaagtcaacacgaagagctctcccaccgcgacggtgtc
tggaacctccagaacgaagtgaccaaagaaaggacagcgcagtgctaccttcgagttgac
gatgaatctcttgcaaggttccacaacagagtgcggcagattttgatggcttcagggtcc
accaccttcaccaagattgttaacaagtggaacactgcactcattggtctaatgacatac
ttccgcgaagcagtggtcaacacgcaagagcttttggacctgctggtgaagtgcgagaac
aagatacagacgcgtatcaagatcggcctcaactcgaaaatgccctcgagattcccgccc
gtcgttttttacacgcccaaagagttgggcgggctcggcatgctgtctatgggacatgtt
ttgattccacagtccgatctccgttggtcaaagcaaaccgacgttggaatcacgcatttc
cgctcaggcatgtcccacgacgaagatcagctcattcccaacttgtaccgctacatccag
ccctgggaagcggaattcgttgactcgcaacgagtgtgggctgagtatgccctcaagaga
caagaagccaatgctcagaacagacgcttgactcttgaagatctggaagactcttgggac
cggggcatacccagaatcaacacgcttttccagaaagaccgacacaccctcgcctacgac
aagggatggcgtatacgtacggagttcaaacagtatcaggtgttaaagcagaatcccttc
tggtggacccaccaaaggcacgacggcaagctgtggaacctgaacaactaccgcacagac
atgattcaggcgctcggaggcgttgaaggcatcttggaacacacgctgttcaaggggacc
tacttccctacttgggaggggttgttctgggaaaaagcatccggtttcgaagagtcgatg
aagtacaagaaacttacgaacgcgcagcgatccggtctgaaccagatccccaaccgtcgc
tttacgctgtggtggtcacccaccatcaaccgtgccaacgtctacgtgggcttccaggtg
caactggacttgacgggcatattcatgcacggcaaaatccccacgctcaagatctcgctc
atccagatcttcagggctcacttgtggcagaaagtccatgagtccattgttatggacttg
tgtcaggtgttcgatcaagaactcgacgccctcgagattgagacagtccaaaaggaaacg
attcacccacgtaaatcctacaagatgaattcctcgtgcgccgacattcttctgttctcc
gcgtacaagtggaacgtttcccgcccatcgttgctcgctgataccaaggatacaatggac
aacacaacgacacaaaagtactggctcgacatacaactccgatggggcgactacgactcg
cacgacgtagagagatacgcgcgagccaagttcctggactacaccacggataacatgtcc
atatacccgtcacccactggactgcttatagccattgatctggcttataacttgcacagt
gcgtacggcaactggttcccgggatgcaagcccctcatacagcaagcgatggcgaagata
atgaaagcgaacccggcgctatatgtgttacgagaacgcatacgcaaagcactccagctc
tactcgtcagagccgactgagccgtacctatccagccagaactatggtgaactgttctcc
aaccagatcatttggttcgtcgacgacacaaacgtataccgagtgacgatccacaaaacg
tttgaaggcaacttgacgacgaagcccataaacggagccatcttcatcttcaacccgcga
actggacaactgttccttaagatcatccacaccagtgtctgggctggccagaaacgtctc
ggacaactcgcgaaatggaagacggctgaagaagtggcggccttgattcgttctctgcct
gttgaagaacagcccaaacagatcattgtcacgagaaagggaatgttggatcctctcgag
gtccacttgctagacttccctaacatcgtgatcaagggctcggagctgcaactgccgttc
caggcgtgtctgaaagtggagaagttcggcgacctcatcctgaaggcgactgaaccacag
atggtgctgttcaacttatatgatgactggctgaagacaatctcttcatatactgcattt
agcagactgatcctgatcctgcgagcgctccacgtgaacacagagagaaccaaggttctg
ctgaagccagacaagacgacgctcacagaaccgcatcacatctggcccacgctgactgac
gatgattggatcaaggtagaggtccagcttaaggacctcatactcgctgactatggcaag
aagaacaatgtgaacgtggcgtccctcacgcaatccgagatccgcgacataatcctgggg
atggagatatcggcgccgtccgctcaaaggcaacagatcgcagagatcgagaagcagagc
aaggagcagagtcagctgacggccaccacgacgcgcaccgtcaacaagcacggcgacgag
atcatcacctccaccaccagcaactacgagtcgcagacctttagctcgaagacagaatgg
cgcgtccgagccatatcagcgacgaatctccacttgcgaacaaaccacatatacgtcagt
tccgacgacatcaaggagagtggttacacatacattctacctaagaatttgctcaagaag
tttgtgaccatatccgatttgagggcacagatcgcatgctacctatacggtacatcgccg
ccagacaacccgcaagtgcgtgaggtccattgcgcggtcttaccgcctcagtggggcacg
catcaaacggtccacttgccccgtcagttgcccaaacaccccgcgctggcacacttgcaa
cccctcggctggatgcacactcaacccaacgagttgccgcaactctcgcctcaggacata
acatcacacgcgaaaattatgtccgagaatccaacatgggatggcgagaagacaatcatc
ataacctgttccttcacgcccggctcctgctcgctcaccgcctacaaactgacgcccagc
gggtacgagtggggtgcgaagaacaccgacagagggaacaaccctaagggctacctcccc
agtcactatgagagggtgcaaatgttgctgtcggaccgattcttggggtactttatggtg
ccttcgcagggcagctggaattataactttatgggtgttcgccacgatccaaacatgaag
tacggcgtgcaactaggcaacccccgcgaattctaccacgaggtgcatagaccggctcac
ttcatgaacttcgcggctatggaggatgcaacggcccccactctagccgccgatagggag
gaccacttcgcttag
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integrated database retrieval system
