Maniola jurtina (meadow brown): 123872406
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Entry
123872406 CDS
T09254
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
mju
Maniola jurtina (meadow brown)
Pathway
mju03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mju00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123872406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mju03019
]
123872406
Messenger RNA biogenesis [BR:
mju03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123872406
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
123872406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
123872406
NCBI-ProteinID:
XP_045772618
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Position
15:1680788..1707869
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AA seq
750 aa
AA seq
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MAATRKLQGEIDRCLKKVTEGVETFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKSWIASGEIKDKSTLLEYRKLIETQMERFKVVERETKTKAYSKEGLGAAQKLDPAQKE
REEMSSWLISSIDALNLQIDLFESEVESLLVGKKKRLDKEKQDRMEELKLKLERHRFHIK
KLETLLRMLDNMSVEVEQIKRIKEDVEYYIVSSLEPGYEENEYIYEDINGLDEIELSGVG
LPSSATTDSNNSNDSPGSPTSILSGDFNGTSPITSPGLDALNHTADSIDIEKKKKEDLTA
KPVKPLALRASCVSSSPATVSSSSFPLGLSLSSQLNLNHSHSNPQSNSINNTGASGTSTP
IKQPAPPSPHLTRPSDHISALLQWPGALSEDVSSVGAEVVENGPVPHLPPPALALLSNHA
LQPAPTSKSVSATSIAPSLVNTTSVASVVSASIASIAATLSDAPSPLTVNGPTHAPHAAH
TTHTPHTPHTPQHIVNNGRVSETPSTPSLNTLNTLNSSASSVSSASVASGVAASLKSMAQ
EAVQRAGLDHHHTQEDEEKNDAVLRLQAGFTVGGAIGSARRGAAVSHANIPPILGVAPLG
PLPLNNDHQVQFQMMEAAFYHMPHPSDSERTRVYLPRNICQTPVYYNQVLLPHSDSVEFF
QRLSTETLFFVFYYMEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKVINEEYEQGT
YIYFDYEKWGQRKKEGFTFEYKYLEDRDLN
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacaagaaagttacaaggtgagatagacaggtgtttaaaaaaagtaacagaa
ggggtggagacgttcgaggacatctggcagaaggtacacaatgcgacgaacagtaatcag
aaagagaaatatgaggcggatctcaagaaggagattaaaaagcttcagaggctacgagac
cagatcaagtcatggatcgcatcgggcgagattaaggataagagtacacttttagaatat
aggaaactaatagaaacgcaaatggaaaggttcaaagtggtagagcgcgaaacaaaaacc
aaggcatactccaaggaagggctgggcgcggcgcagaagctggacccggcgcagaaggag
cgcgaggagatgtcctcgtggctcatatcttccattgatgcacttaacttacagattgat
ctttttgaatcggaagtagagtcactgttagttggtaagaaaaaacgtcttgacaaagag
aagcaggatcgaatggaggagctcaagctaaagctggaaaggcacaggtttcacatcaag
aagctggagactttgctgaggatgcttgacaacatgtctgtagaagttgaacagataaaa
agaataaaagaagatgtggagtactacatagtgtcgtcactagaacccggctacgaagag
aacgaatatatctatgaagacatcaacggtttggacgagatagagctgagtggagtcggc
ctgccttcctccgcaaccacagacagcaacaacagcaatgactcgcccggctcacccact
agcatactatcaggtgactttaatggaacaagtccaatcacctccccaggattagacgct
ctcaatcacacggcagactccatagacatagagaagaagaagaaagaagaccttacggcg
aaaccggtgaagccgctagcgttgcgagcgtcgtgcgtcagcagcagccccgccaccgtc
agcagcagctccttcccgctcggcctcagcctcagctcgcagctcaacctgaaccactcg
cactccaacccgcagagcaacagtataaacaacacgggcgcgtctggtacgtctactccc
atcaaacagcccgcaccgccctcgccacacctgaccaggcctagcgaccacatctccgct
ctgctgcagtggccaggcgcgctcagcgaggacgtttcgagtgtgggcgcagaagtagtg
gaaaatggtccggtcccgcacctgccgccgcccgcgctcgcgctgctctccaaccacgcg
ctgcaacccgcgcccacgtcaaaaagcgtgtcggcgacgtcaatcgcgccgagcctcgtc
aacacgacgtcggtcgcgagcgtcgtcagcgccagcatcgccagcatcgcggccacgctg
tccgacgcgccctcaccgctcacggtcaacgggcccacgcacgcgccgcacgcggcacac
acgacacacacgccacacacgccgcacacgccacaacacatcgtcaacaatggtagagta
agcgaaacgccgagtacgccatcgcttaatacactaaacacactcaactcgagcgcgtcg
agcgttagctctgcgagcgtggcgagcggggtggcggcctcgctcaaaagcatggcgcag
gaagccgtgcagcgcgcggggctcgaccaccatcacacgcaggaagacgaggaaaagaac
gacgctgtgttacggctacaagccggcttcacggtcggcggcgccatcggcagcgcgagg
cgcggcgcggcggtgtcgcacgcgaacataccaccgatactgggagttgcgccgctaggg
cctctacctttgaataacgaccaccaagtgcaattccagatgatggaggccgcgttctac
cacatgccacacccttccgactcggagcgcacgagggtctacctacccaggaacatttgc
cagacacccgtctactacaatcaggtgctgttaccccactcagactcggtggagtttttc
cagcggctgtcgacggagacattattcttcgtattctactacatggaggggacgaaggcg
cagtacctagctgctaaagcgctgaaaaagcagagttggcgcttccacacaaagtacatg
atgtggttccagaggcacgaggagcctaaggttatcaatgaggagtatgaacagggcacg
tacatatactttgactatgagaagtggggccagcggaaaaaggagggcttcacatttgag
tacaagtacttagaggatcgcgacttgaactga
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