Maniola jurtina (meadow brown): 123872660
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Entry
123872660 CDS
T09254
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
mju
Maniola jurtina (meadow brown)
Pathway
mju03030
DNA replication
mju03420
Nucleotide excision repair
mju03430
Mismatch repair
mju03440
Homologous recombination
mju03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mju00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
123872660
03420 Nucleotide excision repair
123872660
03430 Mismatch repair
123872660
03440 Homologous recombination
123872660
03460 Fanconi anemia pathway
123872660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mju03000
]
123872660
03032 DNA replication proteins [BR:
mju03032
]
123872660
03400 DNA repair and recombination proteins [BR:
mju03400
]
123872660
Transcription factors [BR:
mju03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
123872660
DNA replication proteins [BR:
mju03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
123872660
DNA repair and recombination proteins [BR:
mju03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
123872660
MMR (mismatch excision repair)
123872660
DSBR (double strand breaks repair)
HR (homologous recombination)
123872660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
PAS_8
IBR
Motif
Other DBs
NCBI-GeneID:
123872660
NCBI-ProteinID:
XP_045773045
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All DBs
Position
15:8521535..8529447
Genome browser
AA seq
604 aa
AA seq
DB search
MAYKLSEGSLEIIMNGGLYDKPVMQVLGSKKIQGSGANERYRLLVSDGKHSHSFAMIATQ
LNDMLISGELSDYSVIQINKFITSVLKNTGKGEKRVMIILDITMLAPGTEVGKKLGNPQT
WSEESVTTSTPAQTPMQPVPQQTPALVHSLAKPAAGPSLDSSLLGSQMTHPIASLSPYQN
KWVIKARVMNKSPIRTWSNAKGEGKLFSMDLCDESGEIRATAFRNECEKFYDMIQVDKVY
YISRCQLKTANKQFSTLKNDYEMTFTPDTVVAECMEDASTLPTVKYDYVPISDIANKSPD
TILDVIGVCKSASDVQELTAKSTGKLLKKREATLVDQSGGAIVLTLWGNEAETFDASSNP
VVSAKGARVAEFNGSKSLSCLASTMLRCNPDVPEAHRLRGWYDNGGANMDTVNISARAGG
QPGGSGEWITFSEAEARRLGTGEKGDYYTLLGVLTFIFAENAVYKACPQEQCNKKLVDQE
NGLFRCEKCNREYPNYKYRLLLGANVSDPTGDQRITAFNEAAEAMLGQSAADVGRMSEYD
KAAYTQLFEDVKFRTFVFNFRTKMETYSDEARLKTTVMSAKPVHYKDANAKLIKSITALS
GVQV
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggcttacaaactttcagaaggatctcttgagatcataatgaatggtggcctttacgac
aagccagtaatgcaagtgttgggcagcaagaaaatacaaggtagtggagccaacgaacgg
tacagactgctggtgtctgatggaaaacattcccacagctttgccatgatcgcaacacag
ttgaatgacatgttaatcagtggagagctgtcagactattctgtgatacaaatcaataaa
tttatcacatctgtcttgaaaaatactggtaaaggagagaagcgagtaatgattattctg
gacataaccatgctagcacctggcacagaagttggcaagaaacttggtaacccacaaact
tggtccgaagagtctgtaacaacttcaacaccagctcaaaccccaatgcagccagtgcct
caacaaacaccagcacttgtccactcattggccaagccagctgctgggccaagcttggat
tccagccttcttggctctcaaatgacacatcctattgccagtctaagcccctaccaaaat
aaatgggtcataaaagcccgcgtaatgaacaagtcgccgataagaacgtggagtaatgcc
aagggggaaggcaaactgtttagcatggacctgtgtgacgagagcggggagatcagggcc
acagcattcaggaatgagtgtgaaaagttttatgacatgatacaggttgataaggtatac
tacatcagtcgttgccaactcaaaaccgcaaataaacagttctccactctgaagaacgat
tatgaaatgacattcacacctgacacagtggtagcggaatgtatggaggacgcatcaacg
ttgcccacagttaaatacgactatgtgcccatcagcgatattgccaacaaaagccctgat
acaatacttgatgtgatcggagtatgtaaatcggcatctgatgtacaggagctaacggca
aaaagcacagggaagctactcaagaagagagaagctacactagtcgaccaatcaggcggg
gctattgttctcacactgtggggcaatgaagcggagacctttgatgctagcagcaaccct
gtggtgtctgcaaagggtgctcgtgtagcggagttcaacggaagcaagtctctgtcgtgc
ctcgcgtccacgatgttacgatgcaaccccgacgtgcccgaggcgcatcgcctgcgaggc
tggtacgacaacgggggcgctaacatggacactgtcaatatctccgccagggcgggcgga
caacccggaggcagtggcgaatggatcacattctccgaagccgaggcgcgcaggctgggc
acgggggagaagggagactactacaccctcctgggcgtcctcaccttcatattcgcggag
aacgccgtctacaaggcgtgccctcaggagcagtgcaacaagaagctcgtcgatcaggaa
aacggactgttccgatgcgagaagtgtaaccgagagtatcctaactataaatacaggctg
ctgcttggagccaacgtgtcagacccgaccggcgaccaacggataaccgcattcaacgag
gccgcggaagcgatgctgggccaatccgccgccgacgtcggccgcatgtcggagtacgac
aaggcggcgtatacgcaactcttcgaggatgttaaattcaggaccttcgtctttaacttc
cgaactaaaatggaaacatacagtgatgaagccagactaaagacaacagtgatgtcggct
aagccagtgcactacaaagacgctaacgctaaactcattaaaagtatcacggccttgagc
ggggttcaagtgtaa
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