Maniola jurtina (meadow brown): 123873629
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Entry
123873629 CDS
T09254
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33
KO
K15542
polyadenylation factor subunit 2
Organism
mju
Maniola jurtina (meadow brown)
Pathway
mju03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mju00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123873629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mju03019
]
123873629
Messenger RNA biogenesis [BR:
mju03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
123873629
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML
WD40_Gbeta
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
ASA1
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_WDR19_1st
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
CFAP251_N
eIF2A
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_NOL10_N
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_WDR11_2nd
Tricorn_2nd
Beta-prop_WDR41
Beta-prop_ACSF4
WD_LRWD1
Frtz
Motif
Other DBs
NCBI-GeneID:
123873629
NCBI-ProteinID:
XP_045774504
LinkDB
All DBs
Position
17:complement(6168301..6171302)
Genome browser
AA seq
873 aa
AA seq
DB search
MDFGNPPPNMGMPPPGMGGPMGPPGRNIRHNFRPFNYQMRFPPQGPLNMTQDDFDGKRLR
KSVMRKTVDYNSSIIKALECRVWQRDWRDRYALQPDAMYTPDLLPPPSYPDNPINAVTTR
FVKTATNKMRCPIFAVAWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDSPVRSMVW
SHGEGWMVTGDHSGFIKYWQSNMNNVKMYQAHKEAVRGISFSPSDAKIVTCSDDGTLRIF
DFYRCQEERILRGHGADVKCVQWHPTKALIVSGSKDNQQPIKLWDPKSGTALSTLHAHKS
TVMDLKWNENGNWLITASRDHLLKLFDIRKLGTELQIFRGHKKEASSVVWHPTHEGLFCS
GGSDGTILFWNVGTDKEVGCIEGAHESIVWTMAWHPLGHILCSGSNDHTSKFWTRNRPGD
QMRDKYNLNTLPPGVQEDNELEEPAAIPGMGPEDKVEIFSTDTDKAIPGLDLDTTFLPMD
FEKKVKKVPYSKPIPRNFQVQWNHGPSLDDSATEALTQALVESVPGAVPLQQLSPTAIFI
YGKLISVEPGSKLEKAISEGPIALRRYIASGEIEELEDMMPHLEQDADDDNFLQPFEYPT
HENNDNENSALEDNNVDKNDYDKEDYYNNDMDITEPNQDDYNNYDNGPPDMNNMMPMGSM
PPMGFMGPPMNMGPPMGPPMHGMHMPPQHMPPGMPPGNMPPMGNMPPIGAMPPINNMNTR
PVFPDNGFNKGHYESGYDSNQSFSQENDEYNEEESFDQSFNEEENNFNEEENNEGENYGR
NQRWGGGYRGRGQDRGQNRGRGQDRGRGQDRGRNQDRGRGQDRGRGQERGRGRGMNGFGG
RNMRRGGNQRGSTWNRRGSGASRMFRRGSKQTN
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggattttggaaacccacctccgaatatgggtatgcctccacccggcatgggtggtccc
atgggtccaccaggccgtaacattcgccataattttagacctttcaactatcaaatgcga
tttccaccccagggtcctctgaatatgactcaagacgacttcgatgggaaacgtttacgt
aaatctgttatgcgtaaaaccgtagactataattcatcaattataaaagctttagaatgt
cgtgtttggcagcgagactggcgcgacagatacgctttgcagccggacgctatgtacacc
cctgacttgttaccaccaccttcatatccagataaccctataaatgctgttaccactcgt
tttgttaagactgctactaataagatgagatgccctatttttgctgttgcctggacaccg
gaaggccgcaggttaataactggagcttcatctggagagttcactctatggaatggatta
acttttaattttgaaactattcttcaagctcatgattcccccgtgcgatcgatggtatgg
tctcatggcgaaggttggatggtaaccggagatcactctggtttcattaagtattggcaa
agtaacatgaataatgtaaaaatgtatcaagctcacaaggaagcagtgaggggtattagt
tttagtcccagcgatgcaaagattgtcacttgctcagatgatggcactttacggatattt
gacttttatagatgtcaagaagagagaattttgagagggcatggtgctgatgtgaaatgt
gtacagtggcacccgaccaaagctctcattgtatctgggagtaaggataaccagcagcca
ataaaattatgggatcctaagtctggaacagcattatctactttacatgcacacaaatct
actgttatggacttaaaatggaatgaaaacggcaattggctaataactgcatcccgtgat
catttattaaagctttttgatattcgtaagcttggtactgaacttcagatatttagaggt
cacaaaaaagaggcttcaagtgtagtgtggcatccaactcacgagggcttattctgctct
ggcggttctgatggaaccatcttgttttggaatgttggtactgataaagaagtaggatgt
atagaaggtgctcatgagtctatagtttggacaatggcttggcaccctctgggccatata
ctatgctctggatctaatgatcacacttctaagttttggacccgtaatcgtccaggtgat
cagatgagagacaaatacaaccttaatacattgcctccgggagttcaagaggacaatgag
ttagaggagccagccgctattcctggaatgggcccagaggacaaagttgaaattttctct
actgatactgataaagcaattcctggcttagatttagataccacatttctaccaatggac
tttgaaaagaaagttaagaaagtaccttatagtaagcctataccgagaaacttccaagtt
caatggaatcatggtccatccttggatgattcagcaacagaagcattaacacaagctctt
gtggagtctgttccgggtgcagttccactacaacaactgagtcctactgctattttcatt
tatgggaagcttatttctgtagagcctggatcaaaacttgaaaaagctatatctgaaggt
ccaatagcactgagaagatatatagcgagtggtgagatagaggaattagaagacatgatg
cctcatttagaacaggatgctgatgatgataatttcttgcaaccgtttgagtatcctact
catgaaaataatgataatgaaaatagtgcacttgaggacaataatgttgacaaaaatgat
tatgataaagaagattattataacaatgacatggatattactgagccaaatcaagatgat
tataataattatgataatggaccaccagatatgaacaatatgatgcctatgggaagtatg
cctccaatgggtttcatgggacctccaatgaatatgggtccaccgatgggcccccccatg
catggcatgcatatgccccctcaacacatgccaccgggtatgccaccaggcaatatgcct
ccaatgggtaatatgccaccaataggcgctatgcctcctattaacaatatgaacacaagg
cctgtcttccctgataacggatttaacaaaggacattatgaaagtggttatgacagtaac
cagtcattttctcaagaaaatgatgaatacaatgaagaggaatcatttgaccagagcttt
aatgaagaggaaaataatttcaatgaagaggaaaataacgagggcgaaaattatggacga
aatcaaagatggggtggtggttatagaggcaggggtcaagacagagggcaaaatagaggt
agaggtcaagatcggggcagaggccaggaccgaggcagaaaccaggacagaggaagaggc
caggaccgaggcagaggccaagagcgaggtagaggacgaggaatgaacggctttggtgga
cgcaatatgcgtagaggtggcaaccaacgcggttcgacttggaatcgacgtggtagtggc
gccagtcgaatgttcagaagaggcagtaaacaaaccaattag
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