Maniola jurtina (meadow brown): 123874107
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Entry
123874107 CDS
T09254
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
mju
Maniola jurtina (meadow brown)
Pathway
mju03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mju00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123874107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mju03019
]
123874107
03012 Translation factors [BR:
mju03012
]
123874107
Enzymes [BR:
mju01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123874107
Messenger RNA biogenesis [BR:
mju03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
123874107
Translation factors [BR:
mju03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
123874107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
HA2_N
HA2_C
OB_NTP_bind
AAA_19
AAA_11
nSTAND3
Cas3-like_C_2
ABC_tran
AAA_22
Motif
Other DBs
NCBI-GeneID:
123874107
NCBI-ProteinID:
XP_045775250
LinkDB
All DBs
Position
17:5773850..5783752
Genome browser
AA seq
1048 aa
AA seq
DB search
MSRNFNNWTKPRGSRGRGWGASNQRRGIPPGLRGKQIGLYFRDLGRKQKKAEKLVINLTI
PTHIMTEVENNLSLIKKIATRNNIDLPIIDDFKVITEIIDLTESDCKKIKVEKEPVRMQD
IAQNTKKSKSIESINCEPNTSDFIPISTEEPEWDTSAPKFLSLRHTRDYKYGYEDIITGT
FDEKLDECLSKGVSINLANDETHNLSTALYIEYEDRIQRTRYKEMLKFRQKLPAYVMSKE
IYNSINNNQVIVISGETGCGKSTQVPQIILDEAICAKKGANVKILVTQPRRIAASSLAMR
VAKERDENLGHSVGYAVRLEKVEERLRGSIRYCTTGILLAELEVNQSLSNYSHIILDEVH
ERDIHVDLSMCMLKQVLKKRKDLKLILMSATIDADTLSQYFDGCPLLHIEGLAYPVQDIY
LEQILEITKYRLPPEKEKANVPKWMKFAKRNTSDPMEKDIKYKAEISSWLESKKREMSYE
VYKTLQDSRIEALPLDLVVELLKHICEKEQQGAILVFLPGIGEITKLMSLMEDRKCFPPS
CFEIYPLHSKLATLEQHKIFERPPGHIRKIIIATNIAETSITIDDVVYVVDCGKIKISGL
NVETNVSTLSTEWVSQANLRQRRGRAGRCQPGICYHLLTSYRAGMIPERLLPELQRSNLL
EPVLMIKRLRLGIAADALKMVPSPPAQTTINWAVLHLRRCGALDNKETLTPLGWHLARLP
VHPAAGKLLLLGALFGCLDRAASVAAVWGFKDPFQLVIGKEQEVDRAKRNFALGEPSDHI
AISEAIMKWEECGERQRRSFAYENFLSNSTLQLLAEMKIQLGDNLMQMGFLPSGNVKSSY
ENRNSSNLSLFKAIVAASLYPNIANVKWSCLNQGRKPPRFVARSPEDGRLNVHPSSVMCG
PRFVKGGGIRLCDNPGANWLVYWLKQRSSDLFIFDVTFIYTLPLLFFGEFIITDDAEDPE
SCLMSILNVKVRCSLLHASKLFEFRCLLDKVLATKITDTYNHSTQHNEFEEQVLNTVIQL
ITAEDEKAEYLVDFQDSDSSESESDRHY
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtaattttaataactggactaaaccccgaggaagtagaggcagaggctggggt
gcttctaaccagcgtaggggaataccaccgggattgcgaggcaaacagatcggactatat
ttcagagaccttggtcggaaacaaaagaaggctgaaaaacttgtgatcaatttaaccatc
cctacccatatcatgacagaggtagaaaacaacttatcattgataaaaaaaattgctact
cgcaacaatatcgacttgcctataattgacgatttcaaagtgataacagaaattatagat
ttaacagaaagtgactgtaaaaaaatcaaggttgaaaaagaaccagtaaggatgcaagat
atagcccaaaatactaaaaaaagtaaaagtattgagtctataaattgtgagcctaatacc
tctgacttcattccaattagcacagaagaacccgagtgggacacttcagccccaaaattt
ctaagcttaaggcatacacgtgattacaaatacgggtatgaagatatcataacaggaaca
tttgatgagaaacttgatgaatgcctctcaaaaggtgtcagtattaatctagcaaatgat
gaaacccacaatctaagtacagctctctacatagaatatgaagataggatacagaggact
cggtacaaagagatgttgaagtttagacaaaagttacctgcttatgttatgtctaaggag
atttataattctataaacaacaatcaggtgattgttatcagcggggaaactggttgtgga
aaatctactcaggtaccacaaataattttagatgaagcaatatgtgccaaaaagggtgca
aatgtgaaaattctagtcacccaaccaaggaggatagcagcctcgtcattagctatgaga
gttgccaaagagagagatgaaaatcttgggcattcagtgggttatgctgtaagactggaa
aaagttgaagaaagattaagaggcagtatccggtattgtactacaggaatactcttagca
gaactagaagtaaaccaatcactgtctaactacagtcacataatactggatgaggtgcat
gaaagagacatacatgtggatttatctatgtgtatgttgaaacaggtactaaagaaacgc
aaggacctgaagctgatccttatgagtgcaacaatagatgctgacactctctctcaatac
tttgatggctgccctctgttgcatatagagggcttagcgtaccctgtacaagatatttat
ctagaacaaatcctggaaattactaaatacaggctacccccggaaaaagaaaaagccaat
gttcctaaatggatgaaatttgcaaaaagaaacacttcagacccgatggagaaagacatc
aagtataaggcagaaatcagttcttggctggaatcaaaaaagcgcgagatgagttacgaa
gtatacaaaacacttcaagatagtagaattgaagcattgccattagatttagtagtggaa
ctattgaaacatatttgtgaaaaggaacagcagggtgccatacttgtatttttaccagga
atcggggagatcacgaaattaatgtctctcatggaggaccgaaaatgtttcccgccctcc
tgtttcgaaatataccctttacattcaaaactggcaacattagagcaacacaagattttc
gaaaggccgccgggtcatataagaaagattataatagcgacaaatatagctgaaacttcc
atcacgatagacgatgtcgtgtatgtggtggattgtgggaaaattaaaataagcggtttg
aatgtcgagacaaatgtatcgacgcttagcacggagtgggtgtcgcaggctaatttacga
caaaggcgaggccgtgccggtagatgtcaaccaggtatatgctaccacctcctaacatcg
taccgagcaggaatgatcccagagcggttgctaccagagttgcaacggagcaatcttcta
gaaccagtgcttatgataaagagacttcggctcggcatagcggcagatgccttgaaaatg
gtgccgtccccacccgcgcaaactactattaattgggcagtgctacacctgcgaaggtgt
ggcgcgttagacaacaaggaaactttaacccccttggggtggcatttggcgaggctaccg
gtacacccggcggccgggaaactgttgctcttgggggcgcttttcggttgcttagatcgt
gctgctagcgtcgcggctgtatggggcttcaaggaccccttccaacttgttatcggtaaa
gaacaagaagtggaccgagcgaaacgtaatttcgctttaggagaaccaagcgaccacata
gcaatatctgaagctattatgaaatgggaagagtgtggggagcgacaacgacgctctttc
gcatacgaaaacttcctttcaaatagtactctgcaattactggctgagatgaaaattcag
ttgggcgataatctgatgcaaatgggatttttgccgtccggaaatgtcaagtcctcatat
gagaatcggaactctagtaacttgagtttattcaaagctattgttgctgcgtccctgtac
ccgaatattgctaatgtcaaatggtcctgcttgaaccagggtcgaaaacctcccagattc
gtagcacgcagccctgaagatggtagactgaacgtgcatccgagcagtgtaatgtgcggg
cctagattcgtaaaagggggcggtataaggctgtgcgacaaccctggagccaactggttg
gtctactggttgaagcaacggtccagcgatttgtttatctttgacgtcacgtttatttac
accctgcctttgttgttcttcggcgagtttattatcacagatgatgctgaagatccagaa
agctgtttaatgtcaattttaaatgtcaaagtccgttgcagtcttctgcacgcaagcaaa
ttgtttgaattcagatgtctattggacaaagttcttgcgacaaagattacagacacatac
aatcattcgacacaacacaatgagtttgaggaacaagtgctgaacactgtcattcaactc
ataactgcagaagatgaaaaggctgagtatttagttgactttcaagactctgatagttca
gaaagtgaatcggatagacattattag
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