KEGG   Maniola jurtina (meadow brown): 123874165
Entry
123874165         CDS       T09254                                 
Name
(RefSeq) poly(U)-binding-splicing factor half pint isoform X1
  KO
K12838  poly(U)-binding-splicing factor PUF60
Organism
mju  Maniola jurtina (meadow brown)
Pathway
mju03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mju00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123874165
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mju03041]
    123874165
Spliceosome [BR:mju03041]
 Complex A
  U2 snRNP components
   U2 related factors
    123874165
 Complex B
    123874165
SSDB
Motif
Pfam: RRM_1 RRM_7 SNO
Other DBs
NCBI-GeneID: 123874165
NCBI-ProteinID: XP_045775339
LinkDB
Position
18:9854..16199
AA seq 575 aa
MCEREGRGRVCEERSACRRRLALTGSCVAGGFLAAPIYDLQQVGEVHTGPGAKWSTLAGL
LGGSGTRLTAEAADAVNRAKKYAMEQSIKMVLMKQTLAHQQQQMATQRTQVQRQQALALM
CRVYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLSLE
QMNGVMLGGRNIKVVGRPSNMPQAQAVIDEIQEEAKQYNRIYVASVHPELTEDDIKNVFE
AFGAITYCRLAHGASQTKHKGYGFLEYATLPAALEAIASMNLFDLGGQYLRVGRAITPPN
ALAGPPQAGVMPTAAAVAAAAATAKIQAMDAVASNAVALGLTKLSALGVPPAAALPSLAA
ALPLPLPVTLPGALPVALPGAVPPLPVVLPPALPAALPPVALPVIPPPGVVIPRAAPPEP
AAVAAAAAEGLGQQAALQRKLLDSSPDTLQQQESLSISGQSARHLVMQRLMRRRASRTLL
LRNMVAADEVDEALHHEIQEECSKWGRVERLVIYNERQSEDDDPAHASVKIFVQFAEAEE
AAAAAAALQGRYFGGRTVRAALYDQDLFDHGDLSA
NT seq 1728 nt   +upstreamnt  +downstreamnt
atgtgtgagcgagagggccgcggcagagtgtgcgaggagcgcagcgcgtgccgccgccgc
ctcgctctgacgggttcgtgtgttgcagggggcttcctggcggcgccgatctacgacctg
cagcaggtgggcgaggtgcacacggggccgggcgccaagtggtcgacgctggcggggctg
ctgggcggcagcggcacgcggctgacggccgaggcggcggacgcggtcaaccgcgctaag
aagtacgccatggagcagagcatcaagatggtgctgatgaagcagacgctggcgcaccag
cagcagcagatggccacgcagcgtacgcaggtgcagcgccagcaggcgctcgcgctcatg
tgcagggtgtacgtgggctccatctcgttcgagctgaaggaggacaccatccgccaggcc
ttcctgcccttcggccccatcaagtccatcaacatgtcgtgggacccggtgacgcagaag
cacaagggcttcgcgttcgtggagtacgagatccccgaggcggcgcagctgagcctggag
cagatgaacggcgtgatgctgggcgggcgcaacatcaaggtggtggggcggccgtccaac
atgccgcaggcgcaggccgtcatcgacgagatccaggaggaggccaagcagtacaaccgc
atctacgtggcgtccgtgcaccccgagctgacggaggacgacatcaagaacgtgttcgag
gccttcggcgccatcacgtactgccgcctggcgcacggcgccagccagaccaagcacaag
ggctacggcttcctggagtacgccacgctgccggcggcgctcgaggccatcgcgtccatg
aacctgttcgacctgggcggccagtacctgcgcgtcggccgcgccatcacgccgcccaac
gcgctggccggcccgccgcaggccggcgtcatgcccacggccgcggccgtggcggcggcg
gcggccacggccaagatccaggccatggacgccgtggccagcaacgccgtggcgctcggc
ctcaccaagctgtcggcgctgggcgtgccgcccgccgccgcgctgccgtcgctggccgcc
gcgctgccgctgccgctgccggtcacgctgccgggcgcgctgccggtggcgctgcccggc
gccgtgccgccgctgcccgtggtgctgccgcccgcgctgccggccgcgctgccgcccgtg
gcgctgcccgtcatcccgccgcccggcgtggtgatcccgcgcgcggcgccgcccgagccc
gcggccgtggcggcggcggcggcggaagggctcggccagcaggcggcgctgcagcgcaag
ctgctggacagctcgcccgacacgctgcagcagcaggagtcgctgtccatctcggggcag
tcggcgcgccacctcgtgatgcagcggctgatgcggcggcgcgcgtcgcgcacgctgctg
ctgcgcaacatggtggcggcggacgaggtggacgaggcgctgcaccacgagatccaggag
gagtgcagcaaatgggggcgcgtggagcggctcgtcatctacaacgagcgccagagcgag
gacgacgacccggcgcacgccagcgtcaagatcttcgtgcagttcgcggaggcggaggag
gcggcggcggcggcggccgcgctgcagggccgctacttcggcggccgcaccgtgcgcgcc
gcgctttacgaccaggacctgttcgaccacggcgacctgtcggcgtag

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