Maniola jurtina (meadow brown): 123874460
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Entry
123874460 CDS
T09254
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
mju
Maniola jurtina (meadow brown)
Brite
KEGG Orthology (KO) [BR:
mju00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mju01009
]
123874460
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mju03019
]
123874460
04131 Membrane trafficking [BR:
mju04131
]
123874460
03036 Chromosome and associated proteins [BR:
mju03036
]
123874460
Enzymes [BR:
mju01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
123874460
Protein phosphatases and associated proteins [BR:
mju01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123874460
Messenger RNA biogenesis [BR:
mju03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
123874460
Membrane trafficking [BR:
mju04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
123874460
Chromosome and associated proteins [BR:
mju03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
123874460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Tropomyosin
Motif
Other DBs
NCBI-GeneID:
123874460
NCBI-ProteinID:
XP_045775789
EnsemblRapid:
ENSMJUG00000003236
LinkDB
All DBs
Position
2:2371577..2388126
Genome browser
AA seq
1171 aa
AA seq
DB search
MSIPLPPQTTRSSGDGKKTPPSSIVTRNGARKAKIQTRAMSAGTKPSASVIAAKKKAQQK
KKLTVDTVLRDPYQIAMESKSKVKGPTGFVTEPRMAEHRCLWDDKYPECPERLIGVINRC
QELNLIEQCVSFPPRAATKEELHTLHSPSIHEMLEATHQNQDEQFLEDLSSKYDAVYIHP
STHELALIAAGSTIDMVDRIVTGVVQNGAAFVRPPGHHAMRAEPCGYCFYNNVALAAHHA
LSVRHLQRILIIDWDVHHGQATQQMFYDDPRVVYFSIHRYEHGAFWPNLRQSNFHYTGCG
RGEGYTFNVPLNQTGMTDADYIAIWHQLLLPMAIEYQPELVLISAGYDAAVGCPEGEMEV
TPACYATLLNMVMSVCPSVCVVLEGGYCVRSLAEAAALTLRTLLGHPPPRLQALTEPNDS
IRESILNCIYAHKKHWRCYNYQPTYSIDTTVVNVCDRDKQKHTVSVRWEGDETRPERFAT
RDCYPLQDDATKQRIREKLDHLSIVTDLTLAQHPVCYIFDHAMLKHRNICEPGHVESPER
ILRIHERHRDFGLLDRLHHLTARTATDEEILAVHTRKHLDRLKELASTKLRDLNSLKEAY
DSIYFHPDTLESAAVAAGCVLQMVDAVLSNVAGSGVCVIRPPGHHADDEIPSGFCLLNNA
AIAAKYAIQSHGLQRVLIVDWDVHHGNGTQKITYKDKEILYISVHRYDNGSFFPHSRDAD
YTAVGEGRGEGYNVNVPWNKRGMGDAEYMAAFTQVVLPIAYEYNPDLVLVSAGFDACVGD
PLGGCKVSPECYGQMTHLLKGLAGGRIILCLEGGYNVTSISYAMTMCTKALLGDPILHYY
EPKHTVHWSAVESINNVIKTHEKYWKSLKFHLALPVEDVLEKPAPSRGLITNSLETPSHL
NDSKKSEIDTNLECSMSNLSLEVDNKCADGIHCGSDDEDVSCAKSIAGSDSKVNESSPKL
SETSSKGNENATKVNEDRSKVNEGESKVNEGASKVNEGESKVNESASKVNEVASKVNEDA
SKENESEMKATEPTTLVDFLSENMQAIVDGDMFAVVPLQWCPHLDMLYAIPEGVNFEQGV
KCVDCDHTEENWVCLHCYITACGRHINGHMQAHYRSSGHALALSLVDLSAWCSACDAYVD
NALLYDAKNNAHRCKFGEDMPWCYKTDIHME
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattcccttaccgccacagaccacccggtccagtggagatgggaagaaaacaccc
ccctcgtctattgtaacaaggaatggagcaaggaaagcgaaaatccaaacccgtgcaatg
tctgctggaaccaaaccatctgcctctgtgatagctgctaaaaagaaagcccaacaaaag
aagaaattaactgttgatacagtattgcgtgacccctatcaaatagcaatggagtcaaag
tcgaaagtgaaaggtcctacaggattcgtcaccgagcctcgcatggcagagcatcgctgc
ctgtgggatgacaagtatcctgaatgcccggagaggttgattggagttattaaccggtgt
caagaactgaatctaatagagcaatgtgtgtcgttcccaccgagagcggcgaccaaggaa
gagctgcacactctacactcaccttctattcacgagatgttagaggccacccatcagaac
caagatgaacaatttctagaggatttatcttcaaagtacgatgctgtgtatatacaccct
agtacccacgagctagccctgatcgcagctgggtccacgatagacatggtggaccggatc
gtgaccggcgtggtccagaacggagccgcattcgtccggccgcccggacaccacgcgatg
cgcgctgagccctgcggctactgcttctacaacaatgtggcgctcgcagcgcaccacgcg
ctgagcgtgcgacatttacaaaggatattgataatcgactgggacgtacaccacggacaa
gcaacgcagcagatgttttatgacgatccaagagtggtgtatttctcgatccaccgctac
gaacacggagcattctggccgaacctgcgccagtccaacttccactatacagggtgtggt
cggggggaggggtacaccttcaacgtgccgctcaaccaaacgggtatgactgacgcggac
tacatcgcgatatggcaccaattgctactgcccatggccattgagtaccaaccggagctg
gtgctcatatcggcgggctacgacgccgcggtgggctgcccggagggtgagatggaggtg
acgcccgcgtgctacgcaacgctgctcaacatggtgatgagcgtatgccccagcgtgtgt
gtggtgctggaaggcggctactgcgtccgctcgctcgctgaagcggccgcgctcaccctt
cgaacattactgggacacccgccgccgaggttgcaggctttaaccgaacctaacgactca
ataagagaatccatcctcaattgcatatacgcacacaaaaaacactggcgctgttacaac
taccaacccacgtacagtatagacacgacagtcgtcaatgtatgtgacagagacaaacag
aaacatacagtttcagtaaggtgggagggagatgaaacgagacccgagcgtttcgccaca
agggactgctatcctttacaagatgacgcgactaaacaacgcataagagagaaattggac
catttgtcaatagtgacagatttgacgctagctcaacacccagtgtgctacatcttcgac
cacgccatgctgaagcacaggaatatatgcgaaccaggtcacgtagagagcccggaacgc
atcttgcgcatacacgaaaggcatcgtgactttggcttgctagaccgactgcatcacctg
accgctaggactgcgaccgacgaagagatacttgctgtgcacacgaggaaacatcttgac
aggttaaaagaattggcaagtacaaagctaagagatctaaacagcctgaaggaagcgtac
gactccatatacttccaccctgacacgttagagagcgctgccgtagcggcaggctgtgta
ctgcaaatggtagacgcagttttgtccaacgtggccgggtcaggcgtgtgcgtcatacgt
ccaccgggacatcatgcggatgacgagatacccagtggcttctgcttgctcaacaacgcc
gctattgccgccaaatacgcaatacagagtcacgggttgcaacgagtgctgatcgtggat
tgggatgtgcatcatgggaatggaacacaaaagatcacttataaggataaagagatccta
tacatatcagtccaccgttacgacaacgggtcatttttcccacattcacgcgacgcggac
tacactgcggtaggtgagggccggggggaggggtacaatgtcaacgtgccttggaataag
cgcggtatgggcgacgcggagtacatggcagccttcacacaagtggttctccctatcgca
tatgagtacaacccagaccttgtgctagtctcagctggcttcgacgcctgcgtgggggac
cctcttggcggttgcaaagtgtcaccggaatgctatggtcaaatgacccacttgctaaaa
ggactggctggtggtcgaatcattctgtgcttagaaggtggttacaacgtcactagcatc
tcttatgctatgaccatgtgcactaaagccttactcggagacccaatcctgcactattat
gaaccaaaacataccgttcactggtctgcagtcgaaagtatcaacaatgtaataaaaact
catgaaaagtactggaaaagtcttaaattccatctcgcgctacctgtagaagatgttttg
gaaaaaccagcgccatctagaggtttaattactaatagtttggaaacaccaagccatttg
aatgattccaaaaagtcagaaattgatactaatttggaatgcagcatgtcgaatttgagt
ttggaagtggataataaatgtgcggatggtatacattgcggtagtgatgatgaagatgtt
agttgcgcaaagtctatagcaggaagtgactcaaaagttaatgaaagttcgccaaagctt
agcgaaacttcatcaaaagggaatgaaaatgcaacaaaagtgaacgaagatagatcaaaa
gtgaacgaaggtgaatcaaaagtaaacgaaggtgcatcaaaagtaaacgaaggtgaatcg
aaagtgaacgaaagtgcatcaaaagtgaacgaagttgcgtcaaaagtgaatgaagatgca
tcaaaagagaacgaaagtgaaatgaaggcgactgaaccaacaacattagtggacttttta
tcagagaacatgcaggctatagttgacggggacatgtttgctgtggtcccgttgcagtgg
tgtccgcatttggacatgttatatgcaatacccgagggggtgaattttgagcaaggtgtc
aagtgtgtggactgtgaccatactgaggagaactgggtgtgcctgcactgttatattacg
gcctgcggtcgtcacatcaacggccacatgcaagcgcactaccgctcatccggtcacgcc
ctggcgttatctctcgtcgacctctccgcctggtgcagcgcatgcgacgcgtatgtggac
aacgcattactttacgacgctaagaacaacgcgcaccgatgcaagttcggcgaggacatg
ccttggtgctacaaaactgacattcatatggaatag
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integrated database retrieval system
