Maniola jurtina (meadow brown): 123874544
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Entry
123874544 CDS
T09254
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
mju
Maniola jurtina (meadow brown)
Pathway
mju03022
Basal transcription factors
mju03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mju00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123874544
09124 Replication and repair
03420 Nucleotide excision repair
123874544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mju03021
]
123874544
03036 Chromosome and associated proteins [BR:
mju03036
]
123874544
03400 DNA repair and recombination proteins [BR:
mju03400
]
123874544
Enzymes [BR:
mju01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
123874544
Transcription machinery [BR:
mju03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
123874544
Chromosome and associated proteins [BR:
mju03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
123874544
DNA repair and recombination proteins [BR:
mju03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
123874544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
ResIII
DEAD
AAA_11
Stevor
nSTAND3
DisA-linker
Motif
Other DBs
NCBI-GeneID:
123874544
NCBI-ProteinID:
XP_045775919
LinkDB
All DBs
Position
18:11938495..11952864
Genome browser
AA seq
760 aa
AA seq
DB search
MKLTVDGLLVYFPYDYIYPEQYAYMLELKRALDAKGHGLLEMPSGTGKTISLLSLIVAYM
IQNPHHVRKLIYCSRTVPEIEKVLEELKNLIKYYEKSHGEKPSLTGVVLSSRKNLCIHPE
VSREREGKLVDGKCHSLTASYIRERHERDSSVPVCQFYEGFNREGKESMLPYGVYTMDDL
KQYGADRNWCPYFLSRFAIIHAEIVVYSYHYLLDPKIAEVVSKELNKEAVVVFDEAHNID
NVCIDSLSVKLTRRTIDKSTQALQTLEKAVTQLKQEDAERLTLEYEQMVEGLREAAVARE
TDMILANPVLPDEVLNEVVPGNIRNAEHFLGFLKRFIEYLKTRLRIQHVVQESPAGFLKD
VASRVCIERKPLRFCSSRLQSLMRTLQISDPSNFGALTLVANLATLVSSYTKGFVIIIEP
FDDRTPTVSNPILHFSCMDSSIAMRPVFARFQSVIITSGTLSPLDMYPKILDFNPVIMSS
FTMTLARPCILPMIVSKGSDQVTISSKYETREDVAVIRNYGQLLVEISACVPDGVVCFFT
SYLYLESVVGAWYDQGVVASLQKHKLLFIETQDSAETSFALINYIKACESGRGAVLLSVA
RGKVSEGVDFDHHLGRAVLMFGIPYVFTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRALRGKTDYGIMIFADKRFSRADKRSKLPRWIQEHLRDSLCNLSTEEAVQISKRW
LRQMAQPFTREDQLGVSLLTLAQLQSQEQQDKIEKQVIQK
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagttaacggtggatggtctgcttgtatattttccctacgattatatttatccagaa
caatacgcctatatgctggaattgaagagagctcttgatgctaaaggtcatgggctgctg
gagatgccctcagggactggaaagaccatatcattgctctcccttattgtggcttacatg
atacagaacccacaccatgttaggaaactgatctattgttctcgcacagtacctgagata
gaaaaagtgttagaagagttgaagaatctgatcaagtactatgagaaaagccacggggag
aagcctagtctcacaggagttgtgctcagttcaaggaaaaatctatgcattcacccagag
gtgtcccgggaaagggagggcaagttggtggatggcaaatgtcactcactgacagccagc
tacatccgagagaggcatgagagggacagctctgtgcctgtttgtcagttctacgagggc
ttcaaccgtgagggcaaagagtccatgctgccttatggtgtatacaccatggatgacctc
aaacagtacggcgctgatagaaactggtgcccttacttcttgtctagatttgctataatt
cacgcagaaatagtggtatactcgtaccactacctgctagacccgaagatcgcagaagtg
gtatcgaaagagctaaacaaagaggctgtggtggttttcgacgaggcgcataacatagac
aatgtttgcatagactcgctcagcgttaaactcactagacggaccatagataagagcaca
caggcgctacagactttagaaaaagctgtgacacagctaaaacaagaagacgcggaacgg
ttaacactggagtacgagcaaatggtggaaggtttacgagaggcggccgtggcgcgagaa
actgacatgatactcgctaacccggtgttgcccgacgaagtgctcaatgaggtggttcca
ggcaacatcaggaacgcggaacactttctgggcttcttgaagcgatttatagaatacctg
aaaactaggctaagaatacaacatgttgttcaagaatctccggcaggtttcctcaaggac
gtggcgtcccgcgtgtgcatagaacgtaagccgctgcgcttctgctccagccgcctgcag
tcgctcatgcggaccctgcagatctcggacccctccaacttcggcgccctgaccctggtg
gccaacctggcgacccttgtgtcttcctacaccaagggcttcgtcatcatcatcgagcct
tttgacgacaggacacccactgtatccaaccctatcctgcatttttcatgtatggactct
tcaatagcaatgcggcccgtcttcgccagatttcagtctgtcatcattacttctggaacc
ttatcgccactggacatgtaccccaagatcctggacttcaatcccgtgataatgagttca
tttaccatgactctagccaggccctgtatattgccaatgatagtatcgaagggcagcgac
caggtgacgatctcgtccaaatacgagacccgggaagacgtcgccgtcatacggaactat
ggacaattgcttgttgagatatcggcgtgcgttccggacggcgtggtgtgtttcttcacg
tcgtacctttatctcgagagcgtagtgggcgcatggtacgatcaaggagtggtagcgtct
ctacagaaacacaaattactattcatcgagacgcaggactctgctgagacaagctttgca
ctgatcaattatatcaaggcgtgcgagagcggtcgaggcgcagtcctgctgtcggtggcg
cgaggcaaggtgtcggaaggtgtggactttgaccaccacctgggtcgggcggttctcatg
ttcggcatcccctacgtgttcactcagagtcgcatcctcaaagcgcgcttggagtatctt
cgggaccagttccagatacgcgagaatgactttctgacgttcgatgcgatgcgccacgcc
gcgcaatgtgtgggccgagcattacgtggtaaaaccgactacggcatcatgatattcgcg
gacaagcgcttcagtcgcgctgacaagcgcagcaagctgccgcgctggatacaggagcat
ctgagggactccctctgcaacctcagcacggaggaggctgtgcagatcagcaaacgttgg
ttacgtcagatggctcaaccgttcactcgcgaggaccaactcggagtctcactgttgacg
ctggcgcagttgcagtcgcaggagcaacaggacaaaattgagaaacaggtcatacagaag
tga
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