Maniola jurtina (meadow brown): 123875071
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Entry
123875071 CDS
T09254
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
mju
Maniola jurtina (meadow brown)
Pathway
mju03020
RNA polymerase
mju03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mju00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123875071
09124 Replication and repair
03420 Nucleotide excision repair
123875071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mju03021
]
123875071
03400 DNA repair and recombination proteins [BR:
mju03400
]
123875071
Enzymes [BR:
mju01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
123875071
Transcription machinery [BR:
mju03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
123875071
DNA repair and recombination proteins [BR:
mju03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
123875071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
DUF3137
Motif
Other DBs
NCBI-GeneID:
123875071
NCBI-ProteinID:
XP_045776689
LinkDB
All DBs
Position
2:complement(8093283..8101597)
Genome browser
AA seq
1912 aa
AA seq
DB search
MAATNDSKAPLRLVKRVQFGILSPDEIRRMSVTEGGIRYPETMEGGRPKLGGLMDPRQGV
IDRSSRCQTCAGNMTECPGHFGHIDLAKPVFHIGFITKTIKILRCVCFYCSKLLVSPTNP
KIKEVIMKSKGQPRKRLTYVYDLCKGKNICEGGEDMDIGKEGEEGKKSSGHGGCGHYQPS
IRRQGLDLTAEWKHANEDTQDKKILITAERVYEILKHITDDESFILGMDPKFARPDWMIV
TVLPVPPLAVRPAVVMFGSAKNQDDLTHKLADIIKANNELMRNEQSGAAAHVLTDNIRML
QFHVATFVDNDMPGMPKAMQKSGKPLKAIKARLKGKEGRIRGNLMGKRVDFSARTVITPD
PNLRIDQVGVPRSIAQNLTFPELVTPFNIDRMHELVRRGNAQYPGAKYIVRDNGERIDLR
FHPKPSDLHLQYGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCTS
PYNADFDGDEMNLHVPQSMETRAEVENIHITPRQIITPQANKPVMGIVQDTLTAVRKMTK
RDVFLTKEQVMNLLMFLPTWDGKIPQPCILKPQPLWTGKQIFTLIIPGNVNMVRTHSTHP
DEEDDGPYQWISPGDTKVIVEHGELLMGILCKKSLGASAGSLLHICMLELGHETAGRFYG
NIQTVINNWLLLEGHSIGIGDTIADPQTYQEIQRAIVKAKDDVIEVIQKAHNMELEPTPG
NTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVAGSKGSNINISQVIACVGQ
QNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGLIDT
AVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGEDGLAGETVEFQNLPTVK
LSNKAFEKKFKFDPTNERYLKRIFNEDIIKELTESGYVISDLESEWEQLSKDREVLRQIF
PSGESKVVLPCNFRRMIWNVQKIFHINKRLPTDLSPIKVIQGVKDLLNKCVIVAGDDRLS
KQANENATLLFQCLVRSTLCTKFVSEDYRLSSEAFEWLIGEIETRFQQAQVNPGEMVGAL
AAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGGAARD
AEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQNTVIAEDQEFVNVYYEMPDFDPTKISPW
LLRIELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNNEESKFQ
DNDEETVDKMEDDMFLRCIEANMLSDMTLQGIEAIAKVYMHLPQTEAKKRITITEQGEFK
AIAEWLLETDGTSLMKVLSERDVDPIRTFSNDICEIFQVLGIEAVRKSVEKEMNAVLQFY
GLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLLDAASHAEVD
PMRGVSENIIMGQLPRMGTGCFDLLLDAEKCKHGMEMGGLTVGMGVGGGMYFGVGTPSMT
PLMTPWSNQNTPGYGSSVWSPGQVGSSMTPGGPSFSPSGASDASGLSPAYSSSWSPQPGS
PGSPGAPLSPYASPAGASPSYSPTSPVYVAASPSLTPTSSHYSPTSPSYSPASPNYSPTS
PNYSPTSPIYSPTSPGYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYS
ATSPSYSPTSPSYSPTSPSYSPTSAAYSPTSPGYSPSSPSYSPTSPAYSPASLSYSPSSP
NFTPAAPAYSPTSPSYSPTSPAYSPTSPSYSPSSPQYSPSPSYSPTSPSHAGGSPTYSPT
SPQYSPKSPQYSPTSTAYSPSSPQHPGSTRYSPSSPNYSPSSPNYSPSSPSYSPSSTKYS
PTSPTSPQYTPTSPTYSPTSPAYSPSSVGPSTYSPTSPNYSPTSPSHDDGDD
NT seq
5739 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgacgaatgactcgaaggcgcctttgcgccttgttaaaagagtacaattcgga
atattatctccagatgaaatccgacgaatgtcagtcacagaagggggtatacgttacccg
gaaacgatggaaggtggtaggcccaaacttggaggccttatggaccctcgacaaggggtg
atagacagaagttcaaggtgccagacttgtgctggtaatatgacagagtgtccaggacat
tttggccacatagatttggcgaaaccagtttttcacattggtttcataacaaagacaata
aaaatattaagatgtgtctgtttttattgctccaaactgcttgttagcccgacaaaccca
aagatcaaagaagtcatcatgaaatcaaagggccagcctcgtaaacgtttgacatatgtt
tatgatttgtgtaagggtaagaatatttgtgaaggaggtgaggacatggatattggcaag
gaaggggaggagggcaaaaagagttcaggtcacgggggttgtggtcactaccagccatcc
attagaaggcaaggtttagatctcacagctgaatggaaacatgccaatgaagatacacaa
gacaaaaaaatccttataactgcagagcgagtgtatgagattttaaaacatattacagat
gatgaatcctttatattaggtatggatcctaaatttgccagaccagactggatgatagtc
acagttcttccagttccacctttagctgtaagaccagcagttgtgatgttcggatcagct
aaaaatcaagacgatttaactcacaagcttgcagatatcatcaaagctaataatgaattg
atgagaaatgaacagtcaggagctgctgcgcatgtactcacagataatatcagaatgtta
cagtttcatgttgccacatttgtagataatgacatgcctggaatgccaaaggccatgcag
aaatctggaaaaccattaaaggcgataaaggcaagattaaaaggcaaagaaggtagaatc
agaggaaatcttatgggaaaacgtgttgacttctcagcccgtactgtcatcacacccgat
cctaacttgcgtatcgatcaagtaggagtgcccagatctattgcacagaatttaacgttt
ccggaattagttacaccttttaatattgataggatgcatgagttggttcgtagagggaat
gcacaatacccaggagctaaatatatagtgcgtgataatggtgaaagaatagatttacga
tttcatcccaaaccatcagacttacatttgcaatatggatacaaagttgaacgacatttg
agagatgatgatttggttattttcaatcgacagccaactctacacaagatgagtatgatg
ggtcatagggtgaaagttctgccgtggtcaacattccgtatgaatttaagttgtacttca
ccatataacgctgattttgatggggatgaaatgaatttacacgtaccacagtccatggaa
actcgcgctgaggtagaaaacattcacattacaccaagacagattatcactccacaagcg
aataagcctgtcatgggaattgtgcaagatacactaacagctgtaagaaaaatgaccaaa
agggatgtatttctcactaaagaacaagtcatgaacctgctcatgtttttgccgacgtgg
gatggcaaaattcctcaaccatgtattttgaaaccgcagccactttggactggaaaacaa
atatttacattaatcattcctggaaatgtaaatatggttcgaacacattcaacacatcca
gatgaagaagatgatggcccttaccaatggatctcccctggtgacactaaagtcatagtt
gaacatggtgaactgcttatggggatcttgtgtaagaagtctcttggtgcatctgcaggt
tccttgctgcatatatgcatgttggaattaggacacgaaactgctggacgcttttatggt
aatattcaaacagttattaataattggctgctactggaaggtcactccatcggtattgga
gacaccattgctgatccacagacataccaagaaattcagcgtgctatcgtgaaagctaaa
gacgatgtcatagaagtaattcaaaaagctcacaacatggagctagaacctactcctggt
aatacgcttaggcagacattcgaaaatcaagtaaatcggatattgaacgacgctcgtgac
aaaacgggaggctctgctaagaaatctctcacagaatacaataacctcaaagctatggtg
gttgctgggtccaaaggatcaaatattaatatttctcaagttattgcttgtgtgggccag
caaaacgtagaaggaaagcgaattccattcggttttcgtaaaaggaccttgccacacttt
attaaagacgattatggtcccgaatcaagaggtttcgtagagaactcatatcttgccggt
ttgactccttcggaattttatttccacgccatgggtggtcgtgaaggtcttatcgatact
gctgtaaaaaccgctgagacaggatatattcagcgacgtttgataaaggctatggagtct
gtgatggtacattatgacggcacagttcgtaattcggtgggacaactaattcaattgaga
tatggggaagatgggttagcgggagaaactgtagaattccaaaatcttcccacagtaaag
ctgtctaataaagcattcgaaaagaagttcaaatttgacccaacaaatgaaagatattta
aagagaatctttaatgaggatataataaaggaattaactgagtcaggatatgtgattagt
gatcttgagagtgaatgggaacagttgtctaaagatcgagaagtattgcgtcagattttc
ccaagtggcgagtctaaagttgtattgccctgtaacttcaggagaatgatttggaatgta
caaaagattttccatattaacaagagactgcctactgacttaagtcctattaaagttata
cagggagttaaagatctattgaacaaatgtgtgattgtggccggcgatgatcgactatcc
aaacaagctaacgaaaatgctactttacttttccaatgtttagtgagatctacactatgt
actaaatttgtatctgaggattatagactatcaagtgaagcttttgaatggttgattgga
gaaatcgaaacacgtttccaacaagcgcaagtgaatcccggcgaaatggtcggcgctttg
gccgctcaatcccttggagaacctgctactcagatgacattgaatactttccattttgct
ggtgtgtcatcgaaaaacgtaaccctcggtgtgccgcgtttgaaggaaatcattaacatt
tcaaagaaacctaaagctccctcgctaaccgtttttcttactggaggtgcagccagagat
gcagaaaaagccaaaaatgtcttatgtagattggaacatacaactttgcgcaaagttacc
gcaaatactgctatttactacgatcctgatccacaaaatacagttattgctgaagatcaa
gaattcgtcaacgtttattatgagatgccagattttgaccccacaaagatttctccatgg
ctgttgcgtattgaattggatcgtaaaaggatgacggacaaaaaacttacaatggaacag
atcgcggaaaaaataaacgccggatttggagatgatttgaattgtatcttcaatgacgac
aatgctgaaaaactcgtgttgcgtatcagaataatgaataatgaggaaagtaaattccag
gacaatgacgaggaaactgtcgataagatggaagacgatatgttcctccggtgcatcgag
gctaatatgttatcagacatgaccctgcaaggaatagaagcgatcgccaaagtgtacatg
cacttgcctcaaacggaagccaagaagcgtatcacgattacggaacaaggagaatttaaa
gctattgcagaatggttgctggaaacagatggtacctcattgatgaaagttttgtcggaa
cgtgacgttgatccaataagaacattcagtaacgacatttgtgaaatattccaagtactc
ggaattgaagcggtacgaaagtcagtagaaaaggaaatgaatgctgtcttgcagttctac
ggtctatacgtgaactatcggcaccttgctttactttgtgacgtcatgacagctaaaggt
catcttatggctatcactcgtcacggtattaacagacaagatactggagcattgatgagg
tgctcttttgaagagacagtagacgtcttacttgatgctgctagtcatgctgaagtagat
cctatgagaggtgtatctgaaaacataattatgggacaattacctagaatgggaactggc
tgttttgacttgctacttgatgccgagaaatgtaaacatggaatggaaatgggtggactc
acagtaggaatgggagttggaggaggaatgtactttggcgttggcactccttccatgact
cctttgatgacaccctggtctaatcagaacactcctggatatggaagcagtgtttggtct
cctggtcaagttggaagcagtatgactcctggtgggccgtcgttttcaccatctggagct
tcagatgcttcaggtctctctccggcttacagcagctcatggtcgcctcaacctggatca
cccggctcgccgggagctcctctgtcaccctatgcttctccagcaggggcttcaccgtcg
tattctccaacaagtccagtatatgttgcggcctcgcctagcctcactccgacatcttca
cactactcgccaactagtccgtcttattccccggcttcaccgaattattctccaacgtcg
cctaattattctccgacatcccctatatattcgcccacgtctcccggttattcgccgacc
tcgccagggtactcccctacgtctccgtcttattcgccaacatcccccagctattcacct
acgtcaccgagttattccccaacaagtccagcgtattcacctacgtctcctagttactct
gccacttctcccagctattcaccaactagcccatcttattcgccgactagtccgtcttat
tcacctacaagtgcggcctattcgccgacatctcctggttattcaccttcctcacctagt
tattcgccaactagtcccgcttacagcccagcatcactcagctattcaccatcttcgcca
aatttcacaccagccgcaccggcttattcgcctacaagtccgtcatattctccaacatcg
ccggcatattcgccgacttccccgagttactcgccgtcgtcaccgcaatactcaccgtcg
ccgagctattcgccgacttcaccgtcgcatgcgggaggaagtcctacatattcaccgaca
agtccacaatattctccaaagagtcctcaatattcgccaaccagtacggcatattctccg
tcatcaccgcagcacccaggaagtactaggtactcaccttcatcaccaaattactctcct
tcgtcaccaaattactccccttcgtcgcccagctattcgccatcatcgaccaaatactca
ccaacttcaccaacatcaccacagtacactccaacgtctccgacgtattctcctacttca
ccagcttattcgccatcttcagtcggcccatcaacatattcgcccacatcaccgaattac
tcgcccacatcaccttcacatgacgatggtgatgattag
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integrated database retrieval system
