Maniola jurtina (meadow brown): 123875242
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Entry
123875242 CDS
T09254
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
mju
Maniola jurtina (meadow brown)
Pathway
mju04137
Mitophagy - animal
mju04140
Autophagy - animal
mju04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mju00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123875242
04137 Mitophagy - animal
123875242
04148 Efferocytosis
123875242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mju03000
]
123875242
Transcription factors [BR:
mju03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
123875242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS
PAS_11
bHLH_HIF1A
PAS_9
PAS_4
HLH
PAS_2
Motif
Other DBs
NCBI-GeneID:
123875242
NCBI-ProteinID:
XP_045776931
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All DBs
Position
19:4126377..4250949
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AA seq
993 aa
AA seq
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MFVNDEPLIQQCPVVGNFEETGWNLQCPMASQWSRQSVNSSCNYDVYNGYSDFSVQCYNR
TNYVHNIPHQQYYEQNVAYTQPVHQFRTRLACHQMPEQHVYAQAVPDFQTDLPCRQRPEW
DYNSMCYNVDGQACQYTNVVDLEDFMNNEKRKEKSRVAARCRRTKEMQIFAELTAALPAK
KEEVEQLDKASVMRLAISYLRVRDVVSMLPEDKEAPKLQSPKGLEEVQSELSYMNALDGF
VLVLSQQGDIVYCSENIADHLGVSQMEIMGQSVFEFSHPCDHDEIRESLRSGNDGRRDLL
LRLKCTLTSKGRNVHLKSASYKVIHVTGHMITPTEETTKDQDNTESDEERKEAKSYTNTG
ALVAVGRPIPHPSNIETPLNSMTFLTKHSLDMKFTYTDEGLTNSLGFESEELVGRSLYEY
HHAADSASLAQQFKSLFSKGQCETGQYRFLAKTGGYSWVQTQATVITDKQQKPTSVICVN
YVISGIECKDEVFAAHQVQHADLKPVVASAPLVRVSAEPPANGAIVGIVAPEEERPIPVT
EQIFVPRKKEMNKGFLMFSQNEGLTSEWHLNCKSLVLKDEPEDLTHLAPTAGDACISLEN
NSPFDMFDDFMLNDNYCSLLGDDLANGSPVDSLIADSLLSSPEPQETESSCEQSSLLTEL
SLDAFDNRSDNDIDDGNSPFIPTTDELPLLEPAVMWGVLPDSVSQAKPQPSEVQTSAPAL
QRLLAAPPTGPPPQDIITNIYSDPGLIPSRSISSWDTGVKRVMKQEEEPTAKRVKRSPSP
VAPTARTPSSSVLMNLLDIHPQAKQQIRQQLRSNYQVFLNSPRTSPQSPVNKNLPVPVIN
IIRSGPNEQLMRANTTAPNPPLIRTSAMSPLTLNVGSPIYSLPSSPNTPNYSPAMSPAQK
DRVLSPYSTPQSLSPAGSYMYSPNNKLHSPSGVMRGYDPYLNNKMQTSPGFPLQSDMLLD
TTMPLASTDFWPDSEMLQGTSDLLTAFDDVKLV
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgaacgacgaacctctcatacagcaatgccctgttgtcggcaatttcgaagag
acaggatggaacctgcagtgtcctatggccagtcaatggtccagacagtcagtgaacagt
tcgtgcaattacgatgtgtacaatggctatagtgatttctcagtgcagtgctataataga
accaattatgttcataatatacctcatcaacagtactatgaacaaaatgtagcgtatacg
caaccagtgcaccagtttcggacccgtctagcttgccaccaaatgccagaacaacatgtg
tacgctcaagcagtgccagattttcagaccgatctaccatgccgtcaaagaccagaatgg
gattacaatagcatgtgttacaacgttgatggtcaggcgtgtcagtacaccaatgtggtt
gatctagaagactttatgaacaatgagaaacgtaaagagaagtcgcgcgtcgcggcgcga
tgtagacgcaccaaggagatgcagatcttcgccgagctcaccgccgcgttgccggccaag
aaagaggaggtggaacagctggataaggcctctgtcatgcgccttgccatctcatacctc
cgagtgcgagacgttgtctctatgctgcccgaagacaaagaagcgcccaaattgcagagc
cctaaaggcttagaggaggtgcaatctgagctttcatacatgaacgctttggacgggttc
gtcctggtgttgtcacagcaaggcgacatcgtgtactgcagcgaaaatattgcagatcat
cttggcgtgtcgcagatggagataatggggcagagtgtgttcgagttcagccacccctgc
gaccacgacgagatccgcgagtctttgcgctcaggcaacgacgggaggcgcgacttactt
ctacgtctcaagtgtactctcaccagcaaggggaggaatgtgcatctcaaatcggcttcc
tacaaggtcatccacgtaactggccacatgataactcctactgaagaaacaacaaaggat
caagacaacactgaatcagacgaagaaaggaaagaagcaaaaagctacaccaacacggga
gcactagtagctgtaggcaggccgattcctcatccttccaacatcgagaccccactcaac
agcatgactttccttactaaacacagtttggacatgaagtttacttatactgacgaaggg
ttaacaaacagcctgggattcgagtccgaggaactggttggtcgttccctatacgagtac
caccacgcagcggacagtgcgtctttggcacaacaattcaaatcattgttctcgaaagga
caatgcgagactgggcagtaccgcttcctcgccaagaccggcggttactcctgggttcag
actcaggctactgtcatcaccgacaaacagcaaaagccgaccagcgtgatatgcgtcaac
tacgttatcagcggtatcgagtgcaaagatgaggtgtttgctgcacaccaagtgcagcac
gcggatctgaagccggtggtggcatccgccccgcttgtccgtgtgagcgctgaaccacct
gctaacggcgctatagtgggcatagtcgccccagaggaggagcgccctatacctgtcaca
gaacaaatatttgtgcccagaaagaaagaaatgaacaaaggatttctcatgttttctcaa
aacgagggacttacaagtgagtggcacttgaactgcaaaagcttagtgcttaaagacgag
ccggaagatctgacgcatttagcacctacggccggtgatgcctgcatttccctggagaac
aacagtcctttcgatatgttcgacgattttatgctgaacgacaactattgtagcctactc
ggcgatgacctggcaaatggatctcctgtagattctttgattgctgattccttactgtcc
tcacctgaaccacaggaaaccgaatcatcgtgtgaacagtcgtcacttttgacagaactt
tcattagatgcattcgataaccggtcagataatgacattgacgatggaaattcgccgttt
attcctaccaccgatgagcttccactattggaacccgcagttatgtggggggttcttccg
gatagtgttagccaagcaaaacctcagccgtcagaggtgcaaacttcagcaccagcactc
cagcgtttactggcagcgcccccgaccgggccgcctccacaggacattataacaaatata
tattcagatccagggctaattccgagcagaagtatatcttcgtgggacacgggtgtaaag
agggtgatgaagcaagaagaggagccgactgcaaagcgtgtgaagcgtagtccatcccca
gtagcgccgactgcgaggacgccgtcctcgagcgtccttatgaacctcctggacatacac
ccgcaagcgaagcagcagattcgacagcagcttcgctccaactatcaagtgttcctgaac
tcgccaagaacatcaccgcagagtcccgttaataaaaaccttccggttcccgttataaac
atcatacgatcgggaccaaatgaacagctgatgcgtgccaatacaacagcacccaaccct
ccattgatacgcacgagtgcaatgtctccactaaccttaaacgtgggcagcccaatttac
tctttaccctcgagccctaacactccaaattatagccccgctatgagtccggcccaaaaa
gatcgcgtgctaagcccatattccactccccaatccttatcgcccgctggaagctacatg
tacagcccaaataataagcttcattcaccgtctggcgttatgcgtggctacgatccatat
ctaaataataaaatgcaaacaagtcccggatttccgctccaatcggatatgctcctcgac
accaccatgcccctcgcttcaacagacttttggccggactcagaaatgttgcaaggcacg
agtgacttgctcacagcatttgatgacgttaaattagtttaa
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