Maniola jurtina (meadow brown): 123876727
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Entry
123876727 CDS
T09254
Name
(RefSeq) probable DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
mju
Maniola jurtina (meadow brown)
Pathway
mju03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mju00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
123876727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mju03400
]
123876727
DNA repair and recombination proteins [BR:
mju03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
123876727
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_22
Nucleo_P87
Motif
Other DBs
NCBI-GeneID:
123876727
NCBI-ProteinID:
XP_045779003
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All DBs
Position
22:7149113..7164232
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AA seq
1126 aa
AA seq
DB search
MSKRNSIAASNTLFNYFTKTPPSNKKAKQNGETDSSTKLNSPVSSKEKIVENKKRERLPT
KSPEINKDISDSEDEAPISVKKRKRIRLNPVESDDSDVENKTDNKIESSKEKVSLEKKLQ
DSFKYEPGDSPKGSKTKRVVPNDVPQIKTEPQDTPAGPSTLADEGNWIHCKLDWLKPDKI
RDAHKRRPDHPDYDPSTLYVPPDFMKIQTPAHKQWWEMKSAHYDCVLFFKVGKFYELYHM
DAAVGVNELGFSYMKGEFAHSGFPESAYARMVSTLVSKGYKVARVEQTETPDMMQERCKK
NGLTSKYDKVVRREICQVSLRGAQALGLQDSGPAQAASEHMLAIAEEENNGRSTYGVCFI
DTTIGQFHLGQFSDDKHSSRLLTTLAHYPPALIIFDRKHTTSRTSKLLSTHCHNARREAT
NMWAPEKTLKTLAEKYYKTDADGDWPEGIKPFLHEGDALGLTPAPNCYLAIKALGGCVSY
LTHCLLDIQTLGMAQFEQYSPPDVLNTTLTPEDKVENQWRGGNTMVLDAITLRNLRIVQD
EGCLYDKLNFCSTPMGKRLLYQWVCSPSCNLSVIKERQGAIKALFENQELCQDAKNILTT
LPDLDRLLAKIHALGNLNKSKHHPDSRAIFYEEKTYSKRKVLDFISVLNGFTAALKLAEL
FSDTQSDMLKRITQFSPDGRFPDYRDTLKFFKGAFNQKEAEKEGRILPGEGVDQEYDSTL
QAIKEIEGDLKEYLAEQESYFKCRLHYVGTDKKRYQIEVPQNAASRAGSEYHLEGARKGF
KKFSTSETKEFLARMIAAEEQKTNVLKDLSRRIFEKFSSSYNQWESAIKCIATLDILLSF
TEFARQQSGDVCLPDVTFEKADKPYINIVEGRHPCIPIVNDFIPNDTQLGADSARLLLLT
GPNMGGKSTLMRQVGLLTVLAHLGSYVPAQQCRLSLVDRIFTRLGASDDILSGQSTFLVE
MNETAAIVKHATLHSLVLLDELGRGTSTYDGTAIASGVCVELAERSCRCVFSTHYHSLVH
HLASHPGVQLGHMACMVETDETTPDNEDDIPEETITFLYKLSPGACPKSYGFNAARLAGI
PRDITARAHRVSRNLEKEATCVRAFRDLFRISNAAELRKMLSGLSI
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacgtaatagcattgcagcttcaaatacattgtttaattatttcaccaaaaca
cctcccagcaataagaaagcaaagcagaatggggaaaccgatagttcaaccaaactaaac
tctcctgtgagcagcaaagagaaaatagttgaaaataagaaacgagaaaggctgccaact
aaatctccagagataaataaggacataagtgacagtgaagatgaggcaccaatatctgtc
aagaagaggaaacggatcagacttaacccagtggaatctgatgattcagatgttgaaaat
aaaacagacaataaaattgagtcttcaaaagagaaagtgtcccttgagaagaaactgcaa
gatagtttcaaatatgaacccggagactctccaaaaggcagtaaaaccaagagagttgtt
cccaatgatgttccccaaataaaaactgagcctcaagacacccctgcaggaccctcaaca
ttagcagacgaaggcaactggatacactgtaagctagattggctgaaaccagacaagatt
cgagatgctcacaaacgcaggccggatcaccctgactatgacccttcaacattatacgta
cctcctgactttatgaagattcagacaccagcgcacaagcagtggtgggaaatgaaatct
gcacattacgactgtgtgttgttcttcaaagtgggcaagttctatgagctctatcacatg
gatgcagctgtcggggtcaacgaactcggcttttcctatatgaagggcgaattcgcgcac
tccggattccccgaaagcgcatacgcacgtatggtgtccactctggtgtccaagggatat
aaggtggcgagggtggagcagactgagactcctgatatgatgcaggagagatgtaaaaag
aacggtcttaccagcaaatatgacaaagtggtgcgtcgtgaaatctgccaagtgagcctc
cggggcgctcaagccctgggactgcaggacagtgggcccgcccaggctgcctccgaacat
atgcttgcgattgctgaagaggaaaataacggtcgcagcacatacggcgtgtgcttcata
gataccactattgggcagttccacctggggcagttcagtgacgacaaacattcgtccagg
ctgctcaccacacttgcgcactacccaccagctttgatcattttcgatcgtaagcacaca
acttcgcgaacaagcaagcttctaagcacgcattgccacaacgcacgtagagaggccacc
aatatgtgggcgccggagaaaacgctcaaaacgctcgccgagaagtattacaagaccgat
gcggatggtgactggccggaggggatcaagccgtttttgcacgaaggtgatgcattaggt
ctaactccagcaccaaactgctacctagcgatcaaagcactaggaggctgtgtatcctac
ctcacacactgtctgctagacatacaaacccttggcatggcccagttcgaacagtattca
ccccccgacgtgctaaacaccaccttaacacctgaagataaggtagagaatcaatggaga
ggcggtaatacgatggtgttagatgctataacgttgaggaatttgaggatagttcaagat
gaggggtgtttgtatgataaattgaatttctgttccacgcctatgggtaaaaggttactt
tatcaatgggtctgttccccaagttgcaacttatcagtgatcaaggagagacagggggcc
ataaaagcgttattcgagaaccaggaactgtgtcaggacgctaagaatatattgactact
ttgcccgacttggatagacttttggctaaaatacacgcattgggaaaccttaacaagtca
aaacaccatccggactcacgagcaatattctacgaagagaaaacctattcaaaacgaaaa
gtactcgatttcatatccgttctcaatggtttcactgcagctctcaaattggccgagtta
ttcagtgatacacagtctgatatgctaaagagaataacacagttcagtcccgatggaagg
tttcccgattatagagatactttgaaattctttaagggagctttcaaccaaaaagaggcg
gagaaagaagggcgtatattgcccggtgagggggtggaccaggaatatgatagcacgcta
caagctatcaaagaaattgagggcgacttgaaggagtacctcgctgaacaagagagttac
ttcaaatgtaggcttcattacgtgggtacagataagaagcgttaccaaatcgaagttcct
cagaacgctgcgtcgagggcgggctcagaatatcatttggaaggagcaaggaaaggattt
aagaagttttccacatctgaaactaaggaatttctggcaagaatgatcgcagcagaggaa
cagaaaactaacgtgttgaaagacttgagtcgtcgaatattcgagaagttctcgtcgagt
tacaaccaatgggagagcgccataaagtgtatagcaacattagatatattgttatccttc
accgagttcgcgaggcagcaaagtggggatgtgtgtttacctgacgttacatttgaaaaa
gcggacaagccatacatcaatatagtggaaggcagacacccctgcattcccatcgtgaac
gatttcataccgaacgacactcagctgggagcggacagcgcaaggctcctgctccttacg
ggccccaacatgggcgggaaatccactcttatgagacaagtgggacttctcactgtattg
gcgcatttgggcagctacgtaccagctcaacagtgccgcctcagcctggtggaccgcatc
ttcactcggctgggcgcttccgatgacatcttatccggccagtccactttcctcgtggag
atgaacgagacggcagctatcgtcaaacacgctaccttgcactcgcttgttttgctcgat
gaattaggtcgcggcacgtcaacgtatgacggcacggccatagcgtcgggcgtgtgcgta
gaactggcagagaggagctgtcgctgtgtgttctccacgcactaccactcgctggtgcac
catctggcttcacaccccggagtgcagttggggcatatggcctgcatggtagaaacagat
gaaacaacaccggacaacgaagacgacatccccgaagaaacaatcaccttcctctacaaa
ctgtccccgggagcgtgtcccaagtcgtacggcttcaacgcggcgcgcctcgcgggcatc
ccgcgcgacatcacggcgcgcgcgcaccgcgtgtcgcgcaacctggagaaggaggcgacg
tgtgtgcgcgcctttagggacttgttcaggatcagtaatgctgcggagttacgaaagatg
ctgtcgggtttaagcatttga
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