Maniola jurtina (meadow brown): 123876766
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Entry
123876766 CDS
T09254
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
mju
Maniola jurtina (meadow brown)
Pathway
mju03022
Basal transcription factors
mju03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mju00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123876766
09124 Replication and repair
03420 Nucleotide excision repair
123876766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mju03021
]
123876766
03400 DNA repair and recombination proteins [BR:
mju03400
]
123876766
Transcription machinery [BR:
mju03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
123876766
DNA repair and recombination proteins [BR:
mju03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
123876766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
123876766
NCBI-ProteinID:
XP_045779081
LinkDB
All DBs
Position
22:2664254..2676010
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AA seq
576 aa
AA seq
DB search
MTTSSEDVLLSVGHVRYKKGDGTLYVMNQRLAWMLENRDTVAVSHKYADIKTQKISPIGK
PKVQLQVVLHDGTCSTFQFVNPAGAEAQAKDRDQVKMLLQDLLPKFKRQIDGELEMKSRL
LSLHPTLKHLYEDLVISKVINSEEYWNTPTLKHYTESTSMKQEAGVSGAFLADIQPQTDG
CNGLKYNLTQDIIDAIFKTYPAVRKKHVDYVPNKMTEAEFWTKFFQSHYFHRDRIASSSS
KDLFGECAKLDDQAIASAMRHTTVDLTVDLPQFTESVPFLPEDDLGEKEKDGTSIHRSMI
KRFNQHSIMVLKASHKSNSSTNSNNTSSNSNSKTTNNNNKVIENGVKETNGVEKRTARDK
DPTEPVDKKKRILEKIHYEDLDNVQIGEEAQELKLTKVERYLLGPSSQVSQSSTSTTRPP
PLSALASICQAWSSGQQCQRPFRVSASAAVGALGELSPGGALMRQHQAACMAQLIPPDVK
NELHRIYLSGGELLRELWRCFPQPGASAESEDTPVRAEKFYDALLRFRNVKLRPFEEKML
RELTPLATSLTKHMNQMIDTACAKYAMWQQRQAKLR
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgactacatcgtcggaggacgttctgttgagcgtgggacacgttaggtataagaagggt
gatgggactttgtatgtgatgaaccaaagactagcatggatgttggaaaatcgggacaca
gtcgctgtgtctcacaagtacgctgatattaaaacacaaaaaatctctcccatcggcaaa
ccaaaagtgcagctacaagtggtcctccacgatggcacgtgttccacgttccagttcgtc
aacccggcaggcgcggaagctcaggccaaagaccgcgaccaggtcaagatgctactgcag
gatctattgcctaagttcaagaggcagattgatggggagttggaaatgaaatctaggtta
ctatcattacatccgacactgaagcatttatacgaagacttggtgatatcaaaggtgatc
aacagtgaggaatactggaacacccccactttgaaacactacacagaatctactagcatg
aaacaggaggctggtgtatcaggagcgttcctagcagatatccaaccacagacagatggc
tgcaacggactgaaatacaacctgacacaggacatcatagacgcgatattcaagacatac
cccgccgtgaggaagaaacatgtggactatgtgcctaacaagatgacagaagctgaattt
tggaccaaattctttcaatcgcattattttcacagagaccgcatcgcatcgtcgtcgagt
aaggacctgtttggtgaatgcgctaaactggacgaccaggccatcgcgtcggccatgaga
cataccacagtggatctcaccgtggatttacctcaattcacggagtctgtcccgttctta
cccgaagacgatttgggtgagaaggaaaaggacggcacctccatacaccgcagcatgatc
aaaagattcaaccaacactccattatggtgctcaaagctagtcataaatcaaacagcagt
accaatagcaataacacaagtagtaatagcaatagcaaaacaacgaataacaataacaaa
gtcatcgagaacggtgtgaaagagacgaacggtgtcgagaaaaggaccgcgcgagacaaa
gatccgaccgagcccgtggataagaagaaaaggattttggaaaagatacattatgaagat
ctagataatgtccaaattggtgaggaggcgcaggagttaaaattaacgaaggtggaaagg
tatttgttaggtccgtcgtcacaagtgagtcagtccagtactagcaccacccgcccaccg
ccgctgtcggcgctagcgtctatatgtcaagcgtggtcgagtggacaacagtgtcaaagg
ccgttcagagtgagcgcgtcagcggccgtgggtgctttgggcgagctgagtccaggaggg
gcgttgatgaggcaacaccaagccgcgtgtatggcgcaactaataccaccggacgtgaaa
aacgagttacaccgcatttacctatccgggggcgaactactccgcgagctgtggcgatgt
tttccgcagcccggcgccagcgcggaatccgaagacacgcccgtgcgcgcggaaaagttc
tacgatgcgctacttaggtttagaaacgtcaaattaaggccctttgaggaaaaaatgctc
cgtgaactaactccgttagcgacttcgctaaccaaacatatgaaccaaatgatcgacaca
gcatgtgccaagtatgcaatgtggcaacagagacaggccaagctacggtag
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