Maniola jurtina (meadow brown): 123876931
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Entry
123876931 CDS
T09254
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
mju
Maniola jurtina (meadow brown)
Pathway
mju03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mju00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123876931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mju03021
]
123876931
03036 Chromosome and associated proteins [BR:
mju03036
]
123876931
Transcription machinery [BR:
mju03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
123876931
Chromosome and associated proteins [BR:
mju03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
123876931
PBAF complex
123876931
GBAF(ncBAF) complex
123876931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_1
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
BRCT_2
Chromo
DUF4551
Motif
Other DBs
NCBI-GeneID:
123876931
NCBI-ProteinID:
XP_045779311
LinkDB
All DBs
Position
22:6507099..6531972
Genome browser
AA seq
965 aa
AA seq
DB search
MTTLGPKKDGGPNIEFFQSPESLTQFDQIRVWLQKNCKKHVQTDPPTKEGLAQLVIQLIQ
YQENKLGKNAADPPFMRLPMKVFMDMKPGGSLCTVLATMFRFKSEQRWRKFDFQVGKNPS
RKDLNVQMMMDIETSLITAEIIRSPCIFIRPEVDKATANKVKDIIVNHQGEICEDEEDAT
HIVYPCVDPLEEEYARPVFKRGNSVLVHWYYFPDSHDTWTQADLPVDVPENVSWDCNRAE
PWRVSATWALDLPQYNEWMNEEDYEVDANGKKKVHKLRLSVEDLIPEPSGKGKKSKRKRS
PSPPPQKHGKRKSRMTKRRDNDVEDEEDNASRDNTDVAPTPEVERPPEAPATPAATTSAA
TPAAAAPEPPPAPVPEAPTTPAPAMDAHDDSQGKHSDSNTQEMLTKEELEDNVTDQTHHI
VVPSYSAWFDYNSIHTIEKRALPEFFNNKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTST
ACRRNLAGDVCAIMRVHGFLEQWGLVNYQVETESRPTAMGPPPTSHFHVLSDTPSGLQPL
QARPTQPRPAENAAVPKVEAGLPNGTEAGAAPVKTEPPPVKPEPAPLELGTAPGLKLDQY
RGGARGREWTEQETLLLLEALELHRDDWNRVAAHVGSRTHDECILHFLRLPIEDPYLNDT
SASGVLGPLAYQPIPFSKVGNPVMSTVAFLASVVDPRIASKATRAAMDEFAAIKDEVPAA
MMEAHVKAAGAHGPAAALAATGIAGTAPPPQAPPVPGAPPVAPQPEVKKEDGEGKPESME
VDGEGGAKVKDEPTEGASTEDIKESKDDATPPPEAPAAVDAKLQSAAAASLAAAAVKAKH
LAGVEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLIQERQQFH
LEQLKAAEFRARNHAIQRLQAETGVSVPGPTAAGPGAAVAGAGVGPAGDAPPTDATPPVV
PPHHA
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgactaccttggggcctaagaaggacgggggaccgaatatcgagttttttcaatcgccg
gaatccctaacacaatttgaccaaatccgtgtttggttgcaaaaaaactgcaaaaagcat
gtccaaacggatcctcctacaaaagaaggcctggcgcaacttgttatacagctcatacaa
tatcaagaaaacaagttggggaagaacgctgctgatcctccctttatgaggcttccaatg
aaagtgttcatggacatgaagccgggcggctccctgtgcacggtgctcgccaccatgttc
cgcttcaagtcggagcagcggtggcgcaagttcgacttccaggtcggtaagaatccatcg
cgcaaagacctgaacgtgcaaatgatgatggacatcgagacgtctctaataaccgcggag
attatacgctcaccatgcatcttcatacgcccagaagttgacaaagccacggcgaacaaa
gtcaaggacatcattgttaaccatcagggagaaatatgcgaagacgaagaggacgcaacg
catatcgtgtacccgtgcgtggacccgctggaggaggagtacgcgcggccggtgttcaag
cgcggcaacagcgtgctggtgcactggtactacttccccgacagccacgatacttggacg
caggctgatttgccggtggatgtaccggagaacgtgagctgggattgcaaccgcgcggag
ccttggcgggtgtctgccacgtgggcgctcgacctgcctcagtacaacgagtggatgaat
gaggaggattatgaagtcgatgctaacggcaagaagaaggtacacaaactgcgcctgtcg
gttgaggatctcatcccggagccgtcgggcaaaggcaagaagagcaagaggaagcgctcg
ccctctccgccgccgcagaaacacggcaaaaggaagagtcgcatgacaaagcgtcgcgac
aatgacgtggaagatgaagaagacaacgcgtctagagataacacggacgtcgctcctacg
ccagaagtcgagcgtccacctgaagcgcccgcgactcccgcggccaccaccagcgcggcc
acgcccgcggcagcggcgcccgagcctccgcccgcgcccgtgcccgaggcgcccacaacg
cccgcgcccgccatggacgcgcacgatgactcgcagggcaagcacagcgactccaacaca
caggagatgctgaccaaggaagagctagaagataacgtcacggatcaaacccaccacatc
gtggtaccgtcctactcggcgtggttcgactacaactcaatacataccatcgagaagcgc
gccctgcctgaattctttaacaacaagaacaaatccaagacgcccgagatttatctagct
tatagaaacttcatgatcgatacttaccgattgaaccccacggaatatttgacaagtacg
gcgtgccgaaggaatttagcgggcgacgtgtgcgccattatgcgggtgcacggctttctc
gaacaatggggattagtcaactaccaggtggagacagaatctcggccaacggcgatgggt
ccgccgccaacgtcgcacttccacgtcctgtctgacacgccatcgggtcttcagccgttg
caggctagacctacgcaaccgaggccagccgagaacgcagcagtacccaaggtggaagca
ggtctgccgaatggtactgaagccggagcagcgccggtcaaaacagaaccgcctccggtc
aagcccgagcccgcgcccctggaacttggcactgcacctggactcaagttggatcagtac
cgaggtggcgctcgcgggcgcgaatggacggaacaagagactctgctactattggaagct
ttggagctacatcgagatgactggaacagagtagcggcgcacgtggggtccagaacccat
gacgaatgtatcctgcacttcctacgacttcccattgaggatccctacttgaatgacact
tctgccagtggagtattaggtcctttggcataccagccaataccgttcagcaaagtgggt
aacccagtgatgagtaccgtcgcgtttctggcgtcagttgtggacccgcgcatcgcttcc
aaagccaccagggctgcgatggatgagtttgcagctatcaaggatgaagtaccagcagcg
atgatggaagcgcacgtgaaggcagcgggcgcgcacgggccggccgcggcgctcgccgcc
accggtatagccggcaccgcgcccccgccgcaagccccgcctgtacccggcgcgccgccc
gtcgcgccacagcctgaagtgaaaaaagaagatggtgaagggaaaccagaatcaatggag
gtggatggcgaaggaggagctaaggtcaaggacgagccaactgaaggggcgtctacagaa
gatatcaaggaatccaaagatgacgcgacgccaccaccagaggccccagcagcagtcgac
gcgaagctgcaatcagcagcagcagcgtcgttagcagccgcggcagtgaaggccaaacat
ctagcaggcgttgaggagaggaagatcaagtcgctcgtcgcgcttctggtggagacgcag
atgaagaagttagagatcaaactgaggcatttcgaggagttggaggctactatggagagg
gagagagaaggtttggagtatcagcggcagcaattaatacaagagaggcaacagttccac
ttggaacaattgaaagctgcggagttccgcgcgagaaaccacgcgatacaaaggttacaa
gcggagacgggcgtgagtgtcccaggaccaacagcagcgggtccgggggctgcggtggcg
ggggcgggggtggggcccgcgggggacgcgccgccgaccgacgctacaccgccggtcgtg
ccgccgcaccatgcttag
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integrated database retrieval system
