Maniola jurtina (meadow brown): 123876966
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Entry
123876966 CDS
T09254
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
mju
Maniola jurtina (meadow brown)
Brite
KEGG Orthology (KO) [BR:
mju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mju03021
]
123876966
03036 Chromosome and associated proteins [BR:
mju03036
]
123876966
Transcription machinery [BR:
mju03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
123876966
Chromosome and associated proteins [BR:
mju03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
123876966
SLIK complex
123876966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
HDA2-3
ResIII
DEAD
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
123876966
NCBI-ProteinID:
XP_045779385
LinkDB
All DBs
Position
2:complement(7155586..7193828)
Genome browser
AA seq
1832 aa
AA seq
DB search
MLMKGSMNESGSDSMSEKGGKSDTSGSGSGSESESGSSSSGSGTLGRSGSDKSSNVHTDR
SHHSDDTKSSPKRSNANSSKSDHHTDKDSSDDSITKRKSRNNHGKVKSDLWEDNPDMFGI
RRSGRSRKVPDRLKLADSDSSDKGRSHDRKSRKKSDSWNSDTSDSDSDLKGSPPPPSKRP
GQRSVPLRKKKPTRRRRFTSDEEESSEASDEDTRSRTATRRTGAAAVSYKEASDEQTDSS
DLLENEGGEEGEGEAEPEPEDHSETIERVLGLRRGKKGVTGNVTTVYYVEEHGDPNEGCN
PDDEESTELQYLIKWKGWSHIHNTWESEKSLNDQKVKGMKKLENFIKKEADLSWWRRQAC
PEDIDYYECQSELQQELVKTYNSVERIFAEQTRELEGGGTAHEYFCKWESLPYADATWED
SPLIEKRWPKEVEQFKYREAAKTTPSRHCPVLKRRPKFHQVKEQPEYMGKDQTYILRDYQ
MDGLNWLIHSWCKDNSVILADEMGLGKTIQTICFLYYLFQTQQLYGPFLCVVPLSTMTAW
QREFAQWAPDINVVTYIGDVSSRHIIREFEWSFASSKRLKFNAILTTYEILLKDRQFLRS
FSWACLLVDEAHRLKNDDSLLYKALKEFDTNHRLLVTGTPLQNSLKELWALLHFIMPYKF
ESWEEFEKDHEDAATKGYEKLHKQLEPFILRRQKKDVEKSLPAKVEQILRVEMTSIQKQY
YKWILTKNYSALRKGVKGSLNTFINIVIELKKCCNHALLTKPEEFETRASLATTDAVEKL
LRGSGKLLLLDKLLCRLKETGHRVLIFSQMVRMLDILAEYLQRRHFSFQRLDGSIKGELR
KQALDHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQ
KNQVNIYRLVTARSVEEDIVERAKRKMVLDHLVIQRMDTTGRTVLNKRDASGTTVNNPFN
KEDLNAILKFGAEELFKDDDENEEDPVCDIDEILQRAETRDEGPAMVGDELLSAFKVASF
AFDEEKAVMEVKKDSAEEAGKDWDDIIPENVRKNIEEQEKNKEIEDLYLPPRRKNMNQNN
AEGGRKRRGRGEAGDGGEGEGGEGADGDAESDGSDPDASGDDDRPRKRGRPPASHREKIK
GFTDQEIRRFVKSFKKFCAPLKHLDSIACDAELQEKPLAELKKLGEILQERCKAVLNDTT
ETPANENSDGRKNARKTFKLGGVPVNAKTMAACQDELAPLDDFLPQTKEERLKWQLDFRT
RPANFDIEWGVEDDSRLLAGIYQYGMGSWEAIKMDSSFGIGDKILTNGDKKPQAKHLQSR
AEYLLKLIKKLLDQKNGKQKQRKPRMKKGAKEPITKDTIEDDLSSGAESKKGNKNAKNND
KGEKAKSKVEDVLTHDEASNDRKEKDKKRTKKEGKDRTKNDKGRGRKKPAGPMHFTANNE
PRALELLGDLDPSVFDECKEKMRPVKKALRALDNPDQTLSESEQVSRTRACLTQIGSQID
ICLAEYPDPEKKVEWRSNLWYFVSKFTNFDAKQLYRLYRYGLKKSDSKKDGKHKENKSHV
KNNINNSNNHIKSYKKDKDKDKSNRKEKRPKTDKDDKKNDKTAHASGVKRKLEEGECDPE
PTENKRHERHKHKHKDRRDREGSLKRDDLIYRDRSRSERERERDRDRDRDRDRERDRERD
RDRDRERDRERDRDRERSRTRRDSGGVNPRVRPPYAQHAHTDHAVHPAHPAHPAHPAWTP
PAYPGPRQYRGGDRTARPHDKRRFGGYGAMTAGPYGSGYFEGAVIPGGMGFPPVRPYPED
WRGYAQPDYAYDERDYEREVYRRDYDRRAPPT
NT seq
5499 nt
NT seq
+upstream
nt +downstream
nt
atgctcatgaagggctccatgaatgaatctggaagtgattctatgagtgagaagggtggg
aagagtgataccagtggatcaggctctggaagtgaaagtgagagtggttcaagttcttcg
ggttctgggactcttggccgatctggatctgataagtcatcaaatgttcacaccgatcga
tcacatcacagtgatgacacaaaatcatcaccaaaacgcagcaatgctaattcttctaaa
tctgatcatcacactgataaagactcttcggatgattctatcacaaagcgtaaatctaga
aataaccatggtaaagtcaaatcagatctttgggaagataaccctgatatgtttggtatt
aggcgatcaggtcgctcaagaaaagttccagatagactaaaacttgctgatagtgattct
agtgataaaggaagaagtcatgataggaaaagtaggaaaaaaagcgactcttggaattca
gatacctcagatagtgatagtgacctaaagggttcaccaccaccaccatcaaaacgacca
ggccaaagaagtgtacctttaagaaaaaagaaaccaaccagaagaagaagatttacaagt
gacgaggaagaaagctcggaggcttctgatgaagatactaggagtcgaaccgcaacgcga
cgtacgggggcggctgcagtaagctacaaagaagccagcgatgaacaaactgactcatca
gaccttttggaaaatgaggggggtgaagagggggagggggaggcggagccggagcccgaa
gatcatagtgaaactattgaaagggttctgggccttagacgtgggaagaaaggagtcacg
ggcaatgtgactacagtttactatgtagaagagcatggagatcccaatgagggttgtaat
cctgatgacgaggaatcaactgaactacagtacctgattaaatggaaaggctggtcccat
atccacaatacatgggagtcggagaagtcacttaatgatcaaaaggtcaagggcatgaaa
aagttagaaaattttattaaaaaggaagcagacctttcttggtggagacgacaggcttgt
cctgaggatatcgactactatgaatgtcaatctgaattacagcaagaactagtcaaaaca
tataacagtgtggaaaggatatttgctgaacaaacacgtgagctagaaggaggtggaaca
gctcatgaatatttctgtaagtgggaatcactgccttatgcggacgcaacttgggaagat
tctcctcttatagagaaaaggtggcctaaagaagtagaacagttcaaatacagggaggcc
gcgaaaacaacgccctctagacattgtcctgtcttaaaaaggcggcccaagttccatcag
gtcaaagaacaacctgaatacatgggcaaagatcagacttatatactgagagattatcaa
atggatggattgaattggttaatacattcctggtgtaaagacaattccgttatattagct
gatgagatgggcttaggcaaaactatacagactatatgttttttatactacctgtttcaa
actcagcaattatatggaccatttctatgtgttgtacctctaagtacgatgactgcgtgg
caaagggagtttgcgcagtgggcgccagatatcaatgtcgtaacatatatcggtgacgtc
agcagtagacatattattagagaattcgagtggagtttcgctagttcaaagaggttaaaa
tttaacgcgattctgacgacttacgagattttactgaaagatagacaatttctgaggtct
ttcagctgggcttgcttgttagtcgatgaagcgcataggttaaagaatgacgactcactg
ttatacaaggcactcaaagagtttgatacaaatcataggttacttgtaactggtacacca
ctgcagaattctctaaaagaattatgggcgcttttacattttataatgccatataagttt
gaatcatgggaggaatttgagaaagaccatgaagatgcagcaacaaaaggctacgaaaag
ttacacaaacaattagaaccctttatattgaggcggcagaagaaagatgttgagaaatca
ttgcctgcaaaagtggaacaaatattaagagtggaaatgacttccatacaaaaacagtac
tacaagtggattcttacaaaaaactacagtgcattacgaaaaggtgtaaagggctcatta
aatacattcatcaatattgtgatagagttaaagaaatgctgcaatcatgcactcctaact
aaaccagaggagttcgagacgcgggcatcgcttgctactactgatgctgttgagaaactt
ctcagaggctctggtaaactgctattattagataaactgctatgcaggctaaaagaaact
gggcatcgtgtgcttatattctctcaaatggttagaatgttggatattcttgctgaatac
ttacaaaggcggcacttttcattccaacgccttgacgggagcataaagggggaactgagg
aagcaggctttggatcatttcaatgcagaaggttcccaggatttttgctttttactgtca
acgcgagccggcggcctcggtattaacttggcaacagctgataccgtcatcatattcgat
tccgattggaacccacaaaatgatctgcaagctcaagctcgcgcgcatcgtattggacaa
aagaaccaggtcaatatttatcgattggtaaccgccaggtcggtggaagaagatattgtt
gagagggccaagaggaaaatggtcctcgaccacctcgtgatccagagaatggacacaacg
gggcgaacggtgctcaacaagcgggacgcttccgggaccactgtgaacaacccctttaac
aaggaagacttgaacgccatcttgaaatttggcgctgaagaattgttcaaagatgatgat
gaaaatgaagaagatcctgtttgcgacatagatgaaattcttcaaagagcagaaacgaga
gatgaagggccagcaatggtgggagatgaacttctttctgcattcaaagttgccagtttc
gcatttgatgaggaaaaagctgttatggaagtcaagaaagatagcgcggaagaagctgga
aaggactgggatgacataattccagaaaatgttaggaaaaatatagaagagcaggagaaa
aataaggaaatcgaggatttgtacttaccgccgagaaggaagaatatgaaccaaaataat
gcagaaggaggtcgcaagcgccgaggtcgcggtgaggctggtgacggcggtgagggtgaa
ggcggcgagggtgcggacggggacgccgagagtgacggctcggaccccgacgcgagcggc
gacgacgaccgaccccgcaagcgcggccgccctcccgcttcacaccgcgagaagattaag
ggcttcactgatcaagagataaggagatttgttaagagcttcaagaagttctgtgcacca
ttgaagcacctggacagcatagcatgcgatgcagaactgcaggagaaaccactcgccgaa
ctcaagaagttgggcgaaatcctacaagagagatgcaaagcagtattgaatgacaccaca
gagacaccagccaatgaaaatagtgacgggcgtaagaatgcaagaaaaacgttcaagctt
ggcggcgtgcctgttaatgccaagacaatggctgcctgccaggacgaactcgcgcccctg
gacgatttcctgccacaaactaaagaggaaagactgaagtggcagttggatttcagaacg
agaccagcaaatttcgatatcgaatggggagtagaagacgattcaagactgttagctggc
atttatcagtatggtatgggatcatgggaagcaatcaaaatggactcttcatttggtata
ggtgataaaatcctcacaaacggagacaaaaaaccacaggcgaagcatttacagtcgagg
gcagagtatttgttgaagctaataaaaaaactactagatcagaaaaacggcaaacaaaaa
cagagaaaaccaaggatgaagaagggggccaaagaaccaataacaaaagacacaattgaa
gatgatttaagttctggtgctgagagcaaaaaagggaataaaaatgctaagaataatgat
aaaggagaaaaggctaaatcgaaagttgaagatgtgttaacacatgacgaagcgtctaat
gacaggaaagagaaagacaagaagcgcacaaaaaaggaaggcaaagatcggactaaaaat
gataaagggagaggccgtaaaaagccagcaggtcccatgcacttcaccgctaataacgaa
cctagagctttagaactgttaggcgacctagatccatctgtctttgatgagtgcaaagaa
aaaatgagaccagtcaaaaaagcactacgcgctctcgataatcctgatcaaaccttgtca
gaatcggaacaggtttcgaggaccagagcttgcctgacccaaataggaagccaaatagac
atatgcttagctgaatacccagatcctgaaaagaaagtcgaatggagaagtaatctgtgg
tattttgtgtctaagtttacaaattttgatgcaaagcaattgtacaggttgtatagatat
ggtcttaagaaaagtgatagtaaaaaggatggaaagcataaagaaaataagtcacatgta
aaaaataatataaataactccaataaccatattaagtcatataaaaaagacaaagacaag
gacaaaagtaacagaaaagagaaaaggccgaaaaccgataaagatgataagaagaatgat
aaaactgcacatgcatcaggagtaaaaaggaaactggaggaaggggaatgtgaccctgaa
ccgaccgaaaacaaacgtcacgaaagacataaacacaagcacaaggatcggagagataga
gaaggaagcttgaagcgggacgatttgatctacagagaccggagccgttcggagcgggaa
agggagcgggaccgcgatcgggaccgggacagggaccgggagcgggaccgggaacgagat
cgagaccgagatcgtgaacgggaccgcgagcgcgaccgggaccgggagcggtcgcgaacg
cggcgtgacagcgggggcgtgaatccgagggtgcgtccgccgtacgcgcagcacgcgcac
actgaccacgccgtgcacccggcgcaccccgcgcacccggcgcaccctgcctggaccccg
cccgcctaccccgggccccggcagtaccgaggcggcgaccggactgcgcgacctcacgat
aagagacggtttggaggctacggcgcgatgacagcagggccatacggtagcgggtacttc
gaaggagccgtcattccgggcggcatgggcttcccgcctgtgcgcccctaccccgaggac
tggcggggttatgcgcagcccgattacgcgtatgatgaacgggactacgagcgcgaggtc
tataggagagactacgatcgacgcgctcctccaacataa
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