KEGG   Maniola jurtina (meadow brown): 123878422
Entry
123878422         CDS       T09254                                 
Name
(RefSeq) cleavage stimulation factor subunit 1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
mju  Maniola jurtina (meadow brown)
Pathway
mju03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:mju00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    123878422
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mju03019]
    123878422
Messenger RNA biogenesis [BR:mju03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     123878422
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_WDHD1_1st CSTF1_dimer Beta-prop_EML_2 WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_RFWD3 Beta-prop_WDR75_1st Beta-prop_DCAF4 Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_VPS8 eIF2A NBCH_WD40 WDR90_beta-prop_4th Ge1_WD40 Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_WDR75_2nd Beta-prop_NUP159_NUP214 Beta-prop_Vps41 Beta-prop_SCAP Beta-prop_WDR35_TULP_N Beta-prop_NWD2_C RMC1_N Beta-prop_WDR19_1st PEP5_VPS11_N Beta-prop_HPS5 Beta-prop_DCAF12 Beta-prop_Nup120_160 Tricorn_2nd
Other DBs
NCBI-GeneID: 123878422
NCBI-ProteinID: XP_045781557
LinkDB
Position
26:907715..916536
AA seq 433 aa
MKETTGEVDSKNVVKNRELLYRMIISQLYYDGFQTIAATLSAAVHADPPCPPSDRLLNLM
MVGLQHEPDRKDRLAASSGAEHLLGTTGFDLEFEMDASSLAPEPATYETAYVTSHKMSCR
AGAFSSCGQLVATGSVDASIKILDVERMLAKSAPEEVDPGREQQGHPVIRTLYDHTDEIT
ALDFHPREQILVSASRDCCIKLFDITKASAKKAYKSITDAEQVLCVAFHPLGDHIIASTT
HPVIRLYDVTTSQCFVCPIPSHHHKKQVNSIKFSPNGKYFASGSADGSIKLWDTVSNRCF
NTFVNAHDGSEVCSVAFTRNSKYLLTSGMDSSIKLWELASSRCLIQYTGAGTTGRQENHA
QAIFNHTEDYVMFPDEATTSLCTWHSRSASRCQLMSLGHNGAVRHIVHSGTAPAFLTCSD
DYRARFWYRRNTH
NT seq 1302 nt   +upstreamnt  +downstreamnt
atgaaggaaactactggagaagtcgattcaaagaatgtggtgaagaatagagagttgctg
tatcgtatgatcataagccaactctactatgatggattccaaaccatcgctgcaacactg
tcagcagccgtccatgctgatccaccatgcccgccgagtgacaggcttcttaatctgatg
atggtgggtcttcagcatgagcctgataggaaggatcgcctcgctgcatccagtggggct
gagcatctgctcggaactactggttttgatttggagtttgaaatggacgcatcatcgctt
gcccctgagccggcgacgtatgagactgcgtacgtgacgtcgcacaagatgtcgtgtcgt
gcgggtgcttttagttcttgcggacaactggttgctactggcagtgtcgatgctagtatt
aagatattggatgtagagcgtatgttggcaaagtcagcaccagaagaggtagatccagga
agggaacaacaggggcatccagttatcaggacactatatgatcataccgatgagatcacc
gcactggacttccatccccgggaacagatcctagtgtcagcgtctcgagattgttgtatc
aagctattcgacattactaaggcatctgctaagaaggcgtataaatcgatcacagacgca
gaacaggtgctatgtgtagcattccatcccttgggcgaccacatcatagcgtccacgacg
cacccggtgatccggctgtatgacgtcaccaccagccagtgcttcgtgtgccccataccg
tcacaccaccacaagaaacaggtcaactctatcaaattttcaccaaacggcaagtacttt
gcaagcggcagcgcagacggctcgatcaaactttgggacacggtctccaacagatgtttc
aacactttcgtgaacgctcacgatggatcagaagtttgctctgttgcctttactaggaac
agcaagtatttgttaacttctggaatggattcgtctatcaagctttgggaactggcgagc
agtagatgtcttattcagtacacgggagctggaactacgggtagacaagaaaatcatgcg
caagcgatattcaaccacacggaagattacgtaatgttccctgatgaagctaccacgtct
ctgtgcacgtggcattcccgcagcgccagtcgatgtcagctcatgtctttggggcataat
ggggcagtcagacacatagttcactcgggcacggcgccagctttcctaacatgcagcgat
gattaccgcgcaagattctggtatagacgtaacacgcattaa

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