Maniola jurtina (meadow brown): 123879994
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Entry
123879994 CDS
T09254
Name
(RefSeq) general transcription factor IIH subunit 2-like
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
mju
Maniola jurtina (meadow brown)
Pathway
mju03022
Basal transcription factors
mju03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mju00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123879994
09124 Replication and repair
03420 Nucleotide excision repair
123879994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mju03021
]
123879994
03400 DNA repair and recombination proteins [BR:
mju03400
]
123879994
Transcription machinery [BR:
mju03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
123879994
DNA repair and recombination proteins [BR:
mju03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
123879994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
DZR
Motif
Other DBs
NCBI-GeneID:
123879994
NCBI-ProteinID:
XP_045783798
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All DBs
Position
W:5199839..5206568
Genome browser
AA seq
399 aa
AA seq
DB search
MADDEQDPKEYRWETGYEKTWEAIKEDEDGLVEGLVAEFAQKAARKAVVPRRGPIRLGMM
RHLLVAIDCSEAMTSQDLKPMRFLCTLKLLEKFVEEFFDQNPLSQLGIIAMKNKRAEKVT
ELSGNVRKHIKAVQGLSNLTLTGEPSLQNTLELAGRILRPLPGHASRELLVLFASLTTCD
PSDINTTIQTLKTDGIRCSVIGLAAEVRICKKLCQDTGGKYGVVLDDVHYRSLLLEQTSP
PARARALDAGLVKMGFPYTPPPEQPDADPPITVCMCHVEEGEGVGGEGHLCPQCRSKYCS
LPAQCRTCGLTLASAPHLARSYHHLFPVEPYEELTNEGQAQYCFSCLRSFTDLDKQIYRC
SRCIEHYCWECESVISSTLHVCPGCASRPHLYQRLPETS
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgatgagcaggatcctaaagaataccggtgggagacaggttatgagaaaaca
tgggaggctatcaaagaagatgaagatggtcttgtggagggtctggtggcagagtttgct
caaaaggctgcacggaaggcggtcgtgcctcgccgtggacccatacgtcttggcatgatg
agacatttacttgttgctatagactgctctgaggctatgacctcacaggatttgaagcca
atgagatttctttgcactttgaagttgctggagaaattcgttgaagagttttttgatcaa
aacccactaagtcagctgggcatcatagctatgaagaacaaaagagcagagaaggtgaca
gagctgtctggaaatgttaggaaacacataaaagctgtacaaggtttgtcaaacctaact
ttgactggagagccgtctttacaaaatactcttgaattggcaggcaggatactcaggcct
ctgcccggtcatgcctcccgggaacttcttgtgctatttgcttctctcactacttgtgat
cctagtgatattaatactactatacagactctcaaaacagatgggatacgatgttctgtg
attggtctggcagctgaagtacgaatttgtaagaaattatgccaggacactggtggcaaa
tatggggtggttttagatgatgtccattaccgatcattgctgttagaacaaacatcgccg
ccggctcgagcgcgggccctcgacgcggggttggtcaagatggggttcccctatacgccg
cccccggaacaacccgatgcggacccgcccatcactgtgtgcatgtgccacgtggaggag
ggcgagggcgtgggcggcgagggccacctgtgcccgcagtgccgcagcaagtactgctcg
ctgcccgcgcagtgccgcacctgcgggctgacgctcgcttctgcgccgcatcttgccaga
tcatatcaccatctatttcctgtggagccgtatgaagagttgactaatgagggtcaggca
cagtattgtttctcctgtttgagatccttcactgatttagataaacagatataccgttgc
agtcgctgcattgaacactactgctgggagtgtgagagcgtgatatccagtacactgcac
gtgtgcccgggctgcgcctcccgccctcacctctaccagcgcttaccagagacttcgtga
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