Maniola jurtina (meadow brown): 123880852
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Entry
123880852 CDS
T09254
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
mju
Maniola jurtina (meadow brown)
Pathway
mju03020
RNA polymerase
mju03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mju00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123880852
09124 Replication and repair
03420 Nucleotide excision repair
123880852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mju03021
]
123880852
03400 DNA repair and recombination proteins [BR:
mju03400
]
123880852
Enzymes [BR:
mju01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
123880852
Transcription machinery [BR:
mju03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
123880852
DNA repair and recombination proteins [BR:
mju03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
123880852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
123880852
NCBI-ProteinID:
XP_045785161
LinkDB
All DBs
Position
1:4623979..4628192
Genome browser
AA seq
1176 aa
AA seq
DB search
MYDTEDDQYEEEEVEEISSELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DSPPIELQAEAQHSSGEIETPPKYHLKFDQIYLSKPTHWEKDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIVKENEDPIETQHQKTFIGKIPIMLRSTYCLLSNLTDRDLTELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFSMQGGKYAYKTEIRSCLEHSSRPTSTLWVNMM
ARGGQSIKKSAIGQRIVAIVPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQGVALSFIGARGARPGVTKERRIKYAREILQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLLKEVRMYAQ
KFIDKGKDFNLELAIKTKIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGAAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMATLRKLRRQMDIIVSE
VSMIRDIRDREIRIYTDAGRICRPLLIVENGALLLKKKHIDQLKERDYNNYGWQNLVASG
VVEYIDTLEEETVMIAMSPDDLAQVKEYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQS
PRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELPAGINSI
VAILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDSESKRIGDQEEQFEKPTRQTCQG
MRNALYDKLDDDGIIAPGIRVSGDDVVIGKTITLPENDDELEGTTKRYSKRDASTFLRNS
ETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCE
GLTPDIIINPHAIPSRMTIGHLIECIQGKVSSNKGEIGDATPFNDAVNVQKISSLLQEYG
YHLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRA
RDGGLRFGEMERDCQIAHGAAQFLRERLFEVSDPYRIHVCNFCGLIAIANLRNNTFECKG
CKNKTQISQVRLPYAAKLLFQELMSMNIAPRLMVVN
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacacggaagacgatcagtatgaggaggaagaggtcgaagaaatttcctcggaa
ctgtggcaggaagcctgttggattgttatcaacgcttattttgatgaaaagggcttggta
agacagcaacttgacagtttcgatgagttcatacaaatgtccgttcagcgcatcgttgaa
gattctccgcctatcgagctgcaagctgaagcgcagcactcgtccggtgaaatcgaaaca
ccaccgaaatatcacctgaagttcgatcaaatatatctctcaaaacctactcattgggaa
aaagatggtgctccatcgcctatgatgcctaacgaagcgcgtctacgcaatttgacttat
tccgctccgctctatgtggatatcactaaaacgattgtgaaggagaacgaagatcctatt
gagacccaacatcaaaaaactttcattggcaaaattcccattatgttgagatccacttac
tgtctactcagcaatttgacagatcgtgatttaactgagttaaatgaatgcccattagat
cctggtggctactttatcataaacggatctgagaaggtattaatcgctcaagagaagatg
gccactaacacagtgtatgtattcagtatgcaaggtggtaaatatgcttacaaaaccgaa
attcgctcctgtcttgaacacagttcgagaccgacgtccactttatgggtaaatatgatg
gcaagaggtggtcaaagtatcaaaaagtcagcaatcggtcagagaattgttgcaatcgta
ccatacataaaacaagaaatacccattatgattgtgttcagagctctgggctttgtggct
gacagagacattttggaacatatcatttatgattttgatgatccagagatgatggaaatg
gtcaagccctcattggatgaggcatttgtgatacaagaacaaggtgttgcactcagcttc
atcggtgctagaggagctcgccctggtgtcactaaagaaaggcgtattaagtatgctaga
gaaatattacagaaagaaatgttaccacatgttggtgtttcagatttttgtgaaactaaa
aaagcatacttcttgggttacatggtacacagacttctgttggctgcattgggccgccgt
gaacttgatgacagagatcactatggtaataaaagacttgatttagctggacccctatta
gcttttctattcagggggctcttcaaaaatttgttgaaagaagtgaggatgtatgcacag
aaattcattgataaaggcaaagattttaatcttgaattggcaatcaaaactaaaattata
actgatggactgagatattccttggccacaggaaactggggtgatcagaagaaggcccat
caagccagagctggagtgtctcaagtattgaatagattgacttttgcttccaccttgtct
cacttgagacgtgtaaactctccaattggccgtgatggtaaactagccaaacctcgtcaa
ttgcacaatactttgtggggaatgatttgtcctgcagaaactcctgaaggagcagctgta
ggcttggtaaaaaacttggccttaatggcttatatttctgttggaagtcagccatctccc
atactggagttcttggaggaatggtctatggagaatttggaagaaatagcaccttcagct
attgcagatgcaacaaaaatatttgtaaatggctgttgggtaggcattcacagagatccg
gaacaacttatggctacattgcgaaaacttagacgtcaaatggacattatagtttcagag
gtcagtatgattcgagatattcgagacagagaaataagaatttatactgatgctggcaga
atttgtagacctcttcttattgtcgaaaatggggctttgttattaaagaaaaaacatatt
gatcagctcaaagaaagagattataataattatggatggcagaatttagtagctagtggt
gtggttgaatacattgatactttagaagaagagacagtgatgattgctatgagtcctgac
gatttagcccaagtcaaagaatatgcctactgtaccacatacacccactgtgaaatccat
cctgctatgattttgggtgtttgcgcctccattataccattcccagatcacaaccaaagt
cccagaaatacttaccaaagtgctatgggtaaacaagccatgggtgtctatattacaaat
ttccatgtcaggatggacacacttgctcatgtgctctattatcctcataaaccattagtt
accaccagatccatggagtacttgcgatttagagagttgcctgcaggaattaattccatt
gttgctattttatgttacactggctacaaccaagaggacagtgttattttaaatgcttcc
gctgtagaaagagggttctttaggtcagtgttttaccgctcatataaggattcagaatct
aaaagaatcggtgatcaagaagaacaatttgagaagccaacaagacaaacctgccaagga
atgagaaatgctctctatgataaattggatgatgatggcattattgctcctggtataaga
gtttcaggagatgatgttgttattggtaaaacaatcacattgccggaaaatgatgatgaa
ctggagggaacaacgaaacgctacagtaagcgcgatgcttcgacatttttacgtaacagt
gagactgggattgtcgatcaagtaatgctcacactaaacagtgaaggctacaagttttgc
aagattcgtgtgagatcagtgcgcattccgcaaatcggcgataaattcgcttcccgtcat
ggtcaaaaaggaacttgtggaattcagtataggcaagaagatatgccattcacatgtgaa
gggctcactcctgatattatcatcaatccacatgccatcccatctcgaatgacaattggt
cacttgattgaatgtattcaaggaaaggtttcatcaaacaaaggagaaatcggtgatgct
acaccatttaatgatgctgtaaacgtgcaaaaaatttcatctctactgcaagagtatgga
tatcatttacgtgggaatgaagtgatgtacaatggccacacaggcagaaaaatcaatgcc
caggtgtttttaggtcctacctattaccaacgtttgaagcatatggtagatgacaaaatt
cactcccgagccagagggccagttcaaatattggtgagacagcctatggaaggaagagct
cgcgatggaggtttacgttttggagaaatggaacgtgattgtcagatagctcatggagcc
gctcaatttttaagagaacgtctgttcgaagtctcagacccttatcgtatacatgtttgt
aatttctgtggattgattgcaatagcaaatttgcgaaataatacttttgaatgcaagggc
tgcaaaaataagactcaaatttcgcaagtacgcctgccatatgctgcaaaattattgttc
caggaacttatgtctatgaatatcgctcctagacttatggtagtaaactaa
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