Maniola jurtina (meadow brown): 123881172
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Entry
123881172 CDS
T09254
Name
(RefSeq) nipped-B protein isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
mju
Maniola jurtina (meadow brown)
Brite
KEGG Orthology (KO) [BR:
mju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mju03036
]
123881172
Chromosome and associated proteins [BR:
mju03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
123881172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
Cnd1
Motif
Other DBs
NCBI-GeneID:
123881172
NCBI-ProteinID:
XP_045785755
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All DBs
Position
3:8613141..8630084
Genome browser
AA seq
1871 aa
AA seq
DB search
MNERDIPSVPITTLAGVASLTDLLPVLPLPTPLPSTLNNKSQLFHPRVAEEAAILLATRD
DNLVSLLLQSLMQTSVQHIDLKDESIPNAVSPAPQQSTPELLKAILHVNPNVFDQQQRNH
WGNHLHTSKFNGMSPSSTYNYTSHNAVHSSPSPHGHIAAHHHQPASIPNQELLATPCQSS
PHVNMGSPPSQARPGNQINITAQNNVSPPWNNTNQSNVYTSALSTTSCSNPQNGGFYSLV
QDNRNFGTSIPEEKDPLSMSPTSLNDQQKQHIMQSQEKVYEQDGNVVTGQSPAQASVAPS
PLRQEPQVPQPSMGAPYAPPPVLQNTNQEKQDPSKSTTAVNNRYPVVKLGRLSEGILKKH
EASNDDRARKNSTAESDSDDNLPLKSKSNNSVPPVDKEKEAIDIAREKNWEAVKRKHEEA
SKKEESEATIVRPKLRKVERRMVPVLEMLTVDELMETNTYQRFNKLIESVFETIDDEIII
TDEMEGTDIPEEMLLPRYQLQELCSEAAKLKNLGAMEAIPADKLVRLLNILEKNIRAAEK
MSLVGDPEDSEEMRQIWIESSLERVMCASDACLTALYIMTSPSMPKRIFLEDVIDRIIMF
IKFQLNNTIYCVYDPVYSIQSTSKKKVDGRKRRGGGAGQASKRHGSSTRAVRELYTHAHE
CVTLLAELFAAHHLTDTTVLHASTVGVSPFFVENISELQLSALKLVTTIFTKYEQHRRLL
LEDILASIARIPSSKHNLRSFQLSSNQHIQMLTALVLQLVQCVVTLPETLCKSQDKDKVK
DHVEPESKKHIDKDLLIISKYEAAISVGGTFLTSFLNKCRSRSEEVDFRPLFENFVHDLL
TTVNKPEWPATELLLSLLGTMLVKYMSDKSMEMSVRVASLEYLGLVASRLRRDSVTSRAK
LATMDAVVRDIRAEEEKDGCQPQSITCGLDEDEERTEFLQRVLLDYLAINGQKDQAWNCA
RHFYITQWYRDMAVQPKSSSPTKRPKNKGKRKQKDESSEEESEVDDDSDSGIKESKSDRK
QASSAIMSAERFKTIERRKHFFLEKIRPFRYKGGTQVQVMQSYIDYGGAELISQYLASKR
SFSQSFDRYLRKILVILCENTIAIRTKAMKCLTMIVEADPAVLARPDMQIGVNRSFLDQS
TAVREAAVDLVGKFVLSRPDLIDKYYGMLSNRILDTGVSVRKRVIKILKDICIECPEFPK
IPEICVKMIRRVNDEEGIRKLVMEVFQNMWFSPCSNSSRHGALDITAATADPLTRKVLNI
TDVVVSSRDMGLEWFQQLLMSLFKPKEDKEDSTKIIYQPPKSLLVACQQIVDCLIEHLLQ
LEETNTDGTGSSQRILACLATLHLFAKIRPQLLVNHALTLQPYLSLKCQNQYEQQIMSTV
ALTLELVVPLMEHPSEVFLAQLEEDAVKLILQRGQLVIAACIACLAAIVNKLTHNYKLIR
DVFNKYHGILLQWKHSWQHNPDKTRALHTRPHFRRSLFIVGLLLRYFDFTDSKVIEGLAS
DIKEQVYMTLMFFVGLEDEDFVSHTLKALGSVCVRHYEFMLRPELKEFYHQLLTSELAPI
EMKADVLRNIEMYLQEEEQRMIRQDSEWSKRSKHENLKEMGDVSSGMASTVIQLYLKEIL
GSFLHHSTVVRSSAMKVVQLVLAQGLVHPVQIVPYLISMSTDTEVSVSHTADKHLQEIDK
KYPGFIHMKAQLGIKLSYQLQKILQSSKKGLIRGFRKKDQDDLPTALNGFLYSLLRNTRP
QRRALVLSLLKQFDDVSTAPLDQMLYLADNLSYFPYQVQDEPLFIIHHIDIIISTSGSNL
LQLFREGLIKTGNEEKEPLDEEEDEEEADALEARLPPHTRPLRDAMRQARGCLLLLVLKQ
HLKQLYGFTDA
NT seq
5616 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagagggatattccaagtgtccctattacaacattagcaggagtagccagtttg
actgacttattaccagtgcttccattaccaacacctctaccatcaacactgaataataag
tctcagctatttcatcctcgtgttgccgaagaagcagccatactgcttgcaactcgcgat
gataacttggtttccttgttattacagtcgcttatgcagacatctgtgcaacatatagat
ttaaaggatgaaagtataccaaacgcagtcagccctgcccctcagcaatctacacctgaa
ctattgaaggcaatcttacatgtaaatcccaatgtatttgatcaacagcaaagaaaccat
tggggtaaccatttacatacatccaagttcaatgggatgtcaccatcttccacatataat
tacacatcgcacaatgcagtccattcaagtccctcaccacacggacacatcgcagcacat
catcatcagccggcttccattcccaatcaggaactattagctaccccatgccaatcctca
cctcacgtcaatatggggtcacccccctcacaagccaggccaggaaaccaaataaacatt
accgcccagaacaatgtttctcctccctggaataacactaaccagtccaacgtatacaca
agtgccctgtcaactacatcttgttccaatcctcagaatggtggattttatagtttagtt
caagacaatagaaactttggaacaagtatacctgaggaaaaagacccactatctatgtca
ccaacaagtttgaatgatcaacaaaaacaacatattatgcagtcacaagaaaaagtttat
gaacaagatggcaatgtggtaaccggtcaatcaccagctcaagcgagtgtagctccttct
cccctgcgtcaagagccgcaagtgccgcagcccagcatgggcgctccgtacgctcctcca
cctgtcctccaaaacactaatcaggagaaacaagatcctagtaaaagtacaacagctgtg
aataacagatatccagttgttaaattgggacgcctttctgagggtattttgaaaaaacac
gaggcatcaaacgatgatagggcaaggaagaacagcacagctgaatctgattcagatgac
aatctgccactaaagtcaaaatcaaataattctgtgccacctgtagacaaggagaaagaa
gcaatagatatagcaagagaaaagaactgggaagcagtgaaaagaaaacatgaggaagct
agtaaaaaagaagaatctgaagctactattgttcgtcccaagttaagaaaagtcgaaaga
agaatggtaccagtattggaaatgttaacagttgatgaactgatggagacaaatacgtat
cagcggtttaacaaattaattgaatcggtatttgaaacaatcgacgacgaaattataata
acagatgaaatggaagggacagatattcccgaagaaatgttgttgcctcgctatcaactc
caggagctatgttcagaagcagcaaagttgaaaaaccttggtgctatggaagccattcca
gctgataaattagttcgattgctcaatatattggagaagaatataagggcagccgaaaaa
atgtctcttgttggagatccagaggacagtgaagaaatgcggcagatttggatagagtcg
tcattggaacgagttatgtgtgcatcagatgcgtgtctgactgctttgtatataatgacc
tcccctagtatgccgaaacgcatatttttagaagatgtaatagatagaatcattatgttt
ataaagttccaacttaacaataccatatactgtgtatatgatccagtgtacagtatccag
agcacttcaaaaaagaaagtggacggtcgcaagcggcgcggcggaggcgcggggcaggcc
agcaagcgccacggcagctcgacgcgcgccgtgcgcgagctgtacacgcacgcgcacgag
tgcgtcacgctgctcgccgagctgttcgccgcgcaccacctcaccgacaccaccgtgctg
cacgcctccaccgtgggtgtgtcgcctttcttcgtggagaacatcagcgagctgcagctg
tccgccctcaagctcgtcaccacgatttttacaaaatacgagcaacatcggcgactgttg
ttagaggatattttagcgtcgatagcacgaatacctagttcaaaacacaacttaaggtca
tttcaactgagttcgaaccaacacattcaaatgttaactgcgctcgtcctccaactcgtg
cagtgcgtggtgacgctaccggagactctctgcaagtcgcaagacaaggataaagtcaaa
gaccacgttgaaccggagagcaaaaaacatatagataaagatctgttaattatatctaag
tatgaagcagcgatcagtgtaggcggaacatttctgacgtcattcctcaataagtgcaga
agtcggtctgaggaggtggacttcagacctctgtttgagaattttgtacatgatctgttg
actacagtaaacaaaccggagtggccggccactgaattgctgctgagtttacttgggaca
atgctggtaaaatatatgtctgacaagtcaatggagatgtctgtgcgcgtggcgtccttg
gagtacttggggctggtggcgtcgcgcctgcgcagggacagcgtcacctcgcgcgccaag
ctcgccaccatggacgccgtggtgcgcgacattcgcgccgaggaggagaaggacggctgc
cagccgcagtccatcacgtgcggcctggacgaggatgaagagagaacagaattccttcaa
agagttttactcgactacctggctatcaatggacagaaggaccaggcatggaactgcgcg
aggcatttctacatcacgcagtggtatagggatatggcagtgcagccgaaaagttcttcg
cccaccaagaggccgaagaataagggtaagaggaaacaaaaggacgagagtagcgaagag
gaatccgaagtcgacgacgatagcgacagtggaataaaagagtcgaagtcggacagaaaa
caagcttctagtgcgatcatgtcggccgaaagattcaagactatagagcggcggaaacat
tttttcctcgaaaaaattagaccattccgatataaaggaggaacgcaagtgcaagtgatg
caatcgtacatagactacggcggggcggagttaatctcgcaatacttagcgtcaaagagg
tcgttctcgcagagtttcgataggtatctacggaaaatcttagttattctgtgtgaaaat
acgatagctatacgaacgaaggccatgaaatgcttgacgatgatcgtggaggcggacccc
gcggtgctggcgcggcccgacatgcagatcggcgtcaaccgctccttcctcgaccagtcc
acggccgtgcgcgaagcggccgtggacctggtgggcaagttcgtgctcagccgccccgac
cttatcgacaagtactacggcatgctctccaaccggatattggacactggtgtatcagtg
aggaaaagagtgatcaaaatattgaaagacatttgtatagagtgcccagagttcccaaaa
ataccggaaatttgtgtaaaaatgataagaagagtgaacgacgaagaaggtattaggaag
ttagtcatggaggtttttcaaaatatgtggtttagcccttgttcgaattcttcgagacac
ggggctctggacatcactgcggcgacggccgacccgctcacgaggaaggtcctgaacatc
acggacgtcgtcgtgtcctcgagggacatggggctggaatggtttcagcaactgctgatg
agtttgtttaaacctaaagaagataaggaagattccacaaaaattatttatcaaccccct
aaatctctattggttgcttgccaacaaatcgttgactgccttattgaacatttactccag
ttggaagaaaccaatacagatggtacaggatcatcacaacgtattttggcatgcctcgcc
acattacatttgtttgcaaaaattaggccacagttgctagttaatcatgcattgacactg
caaccatacctcagtttaaaatgtcaaaatcaatatgagcaacaaataatgtcgacggtg
gcgttgacgctggagctggtggtgccgctgatggagcaccccagcgaggtgttcctggcg
cagctggaggaggacgccgtgaagctcatcctgcagcgcggccaactcgtcatcgccgcc
tgcatcgcctgcctcgccgccatcgtcaacaagctcacgcacaactacaaactcattagg
gacgtcttcaacaagtaccacggcatactactgcaatggaaacacagttggcagcacaat
cctgataaaacacgagcattgcacacgaggcctcattttcggagatcgcttttcattgta
ggccttttattaagatattttgatttcaccgatagcaaagtaattgaaggattagcgagt
gatataaaagagcaagtgtacatgacgttaatgttttttgtggggttggaagacgaggat
tttgtgtcgcacacgctcaaagctctgggctcggtgtgcgtcaggcattacgagttcatg
ttacggccagagctcaaagagttttaccaccaactgctcacatcggaactggcgcccata
gaaatgaaggctgacgtccttaggaatatagaaatgtacttacaagaagaggaacaaaga
atgattagacaagatagtgaatggtcaaagcgatcaaaacacgaaaacttaaaggagatg
ggtgacgtttcttcgggaatggcatctacagtgattcagttgtacctgaaagagatcctg
ggctccttccttcaccacagcacggtcgtgcgctcgagcgcgatgaaagtggtgcagctt
gtattggcccaaggtctcgtccatcctgtacagattgttccatatttaataagtatgagc
actgacacagaagtgtcggtgtcgcacacggccgacaaacatctccaagaaatagataag
aaatatccagggttcattcatatgaaagcgcaactcggaattaagctgtcctaccagttg
cagaagattttacaaagtagtaaaaagggacttatcagagggtttcggaaaaaggaccaa
gatgacttgccaactgccctcaacggttttttatattctttgctacgtaatacaaggccg
cagaggcgggctttagttttatcattactgaagcaatttgatgatgtctctaccgccccg
ctggatcaaatgttgtacctggctgataatttaagttattttccatatcaagttcaagat
gaacccctttttataattcaccatattgatattataatttcaacgtcgggatcaaattta
ctgcagctttttcgtgagggtctaataaaaacgggaaacgaagagaaggagcctctagac
gaggaagaggacgaggaggaggcggacgcgctggaggcgcgcctgccgccgcacacgcgc
ccgctgcgcgacgccatgcgccaggcgcgcggctgtctgctgctgctcgtgctcaagcag
cacctcaagcagctctacggcttcactgacgcgtga
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