Maniola jurtina (meadow brown): 123881182
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Entry
123881182 CDS
T09254
Name
(RefSeq) spatacsin
KO
K19026
spatacsin
Organism
mju
Maniola jurtina (meadow brown)
Brite
KEGG Orthology (KO) [BR:
mju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mju03400
]
123881182
DNA repair and recombination proteins [BR:
mju03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
123881182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spatacsin_C
MHCassoc_trimer
DUF6547
Motif
Other DBs
NCBI-GeneID:
123881182
NCBI-ProteinID:
XP_045785776
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All DBs
Position
3:complement(10161037..10173682)
Genome browser
AA seq
1942 aa
AA seq
DB search
MEGLSQNEKIIWNCWEEKSPRDMVREAAAKGTHINLAIKYLMSKNSWSESTAQDWFMAEV
KAWTVQLLMRKQIYKVLHILNKCNINPEEHLMVLAETSPEIEYRDFIVENLQKLSKDMKS
ENVKRWEDFKRHWNLLRYLEKSFEVDGTFKQNKVFGIGSNRVFVNESEIKALTIENIEKY
PPDWKCKIATALFFDTFEFSLLDFSTPLNMWNYLVDHNKSMILVRWINVQMSEVVRDMNA
RYNFFNNDNFVQKLLHVDTKGFTNEVLDALDEIFRKWPISTEMIEIISNTTCFEYTKMCI
YDTLASYGIIVESEKKDLYQIIARLARTQNLKLIDDIFSESCATMSMQEFYLELAKYFVK
NKLYKVLTICIEGHILDIDLSEVEQEAKDCIELWLLFKSIEQTSDRQSHVVPVYKTCQQI
AKDDIENYISANPHLVLGMILLEDNLNLFDIFSKEQFLQFKDFKLPNKGYKHKHPHLYNV
YKKHASKNEMYECKDVNVYQLLSGYRGLDVSKIFEFQIINMNSNNQLPDKTDRRSLGSLI
SNEVDVHGLKALTQRTVDMPDFANEKLMKRYGYDAKLNHTYYLKQYRPCNASQAFVSQQY
QIYNRLQEKSIKSACCEAHALALQNWSDTALTACAISFVAMIGCNPTRCRVHVSATKMIR
NHLVQRKGFPENEANKIINEFMIKLIQNNDETAATILKYLEEITSCKLKEIQEAGGKHDM
SLVLYESQTMVKFAMLHNLQLPEMQLREFVRNGSWFNFLLFGDVFRYPLPQMLQLSQDFE
KTSYAEHLKYIMVHKSAEDDKEQKSNSSNGQRRLTRLNSVETSPTQSVVFDFPPSTYMGR
ELWEVAAACHGPEDPPAALLRAADLYREPLLVLLASCYEPNAVDVLWAHWILSSLEPNER
SREALQTVIAQNVPAQLFQKVAEICLVEGYITTLHESMLIFMPESPLAILTSFLYRCIRR
LTFDSETNKYLTSFLQICQRRYSVDASGLPCDLSKDSLQRIAVALVKIALMHNFDMPYHQ
KEFLKCLAEARFGKDLLVQSPDFTMLYEIFKITMETSSVMNISKMLEDDAPAYFLECVEM
YTREGNYDVALQIAKLAALPVDEILIAEWDKKCTRLTGIIVDDLIVYDEDLTYIIAQCSE
AFKEAGVSFNRAIEFLSRVYVEDFEQKFYAYRVIMSWFEENRVYGEKREEIEHEMWDAYL
RCRVNIAFKDYQGTVNFVLNGQKDSNSQKVDLVHEEKPFSLTLHEIEVESDVVNIENVEL
LEYPEDIDRWKKAVSELLELKLLVEGFRLAALYKPPDEYRYGSPVCPVQIIRTCLRLAEG
TCSPYELPQELRLVISSPTLQNKLTVSEASETSFEELVVIQERQDGDGVPHLAAREEADR
LSALEALAVRSGLSVAKQIASYFRIALQIGWDYASVLKYQSRPLDFINLVSGRARMSLAN
LVFRTFNIPSKQIAEYLCREMVAAIISPHLLKTSTFRQKEHFQYTLWGYILDSDIEMFLN
MRPDACSQIGRLILDHLMAFQKIYKATGVLKIPENSLDDSCLDVETLIDEEYQNVEGDEV
ESIMTEEGTLMSAETESVYSVSTVYNAGNKMSRDSRRNLFDVISRSNIHIRYEVKSNIRK
ITKGAKLSTKQVNIISIELLVLAHECFSCACDTEGVAVVLRSAQALSARLLAARSWRLMV
RLLTGLARYTECAYILQALRENHQFEFLLGQFDYMLGQQQDKIAEFKHGLLDFLKTHCPG
DTDTYIMVALHFNMYSEAAHVKKKQANDLIDDLEKMASDASKTSRRQSQPVWLMIHDNVP
TRSLLDTALNHCNDACELYLQGGCTGFAGEMANLAQKIALQISLLNASPTRLILNRSTEQ
TYSLVTEYLSFMEGLVLLSSSGSSVWRELAYRRALTNDQAYLRDMATYRPDIAHDFINRY
KSEKKRTPVSQAAMTELRTLIR
NT seq
5829 nt
NT seq
+upstream
nt +downstream
nt
atggaagggctgagtcaaaatgagaagataatctggaactgttgggaggagaagtcgccg
agggatatggttcgagaggctgctgcaaagggaactcatattaatcttgcaattaaatat
ctaatgagtaaaaactcttggagtgaatctacagcacaagattggtttatggcagaggtt
aaggcatggactgtccagctgctgatgcgaaagcaaatatataaagttctccacattctg
aataaatgcaatataaacccagaagaacatttaatggttctggcagagacatcaccagaa
attgaatacagagatttcattgtggaaaacttgcaaaaactgtctaaggatatgaaaagt
gagaatgtaaaaaggtgggaagatttcaaaagacattggaatttacttcgttatctggaa
aagtcgtttgaagttgatggtaccttcaaacaaaacaaagtgtttggtattggaagcaac
agagtatttgtaaatgaaagtgaaattaaggcattgacaattgagaatatagaaaaatat
ccccctgactggaaatgcaagattgcaactgcattattctttgacacatttgaattttcc
ctgctggatttttctacacctcttaacatgtggaactatttagtagatcacaataaatct
atgattcttgttcgttggatcaacgttcagatgtcggaagtggtgcgggacatgaatgca
cgctacaatttttttaacaatgacaattttgtacaaaaactcttgcatgttgacaccaaa
ggtttcactaatgaagtgcttgatgccttagacgaaatatttcgcaagtggcctatttca
acagagatgatagaaataatttccaacaccacttgttttgaatatacaaaaatgtgtata
tatgacactttagcttcttacggtataattgtagagagtgaaaagaaggatttataccaa
ataattgcaaggttagcgagaactcaaaatttgaaattaattgatgacatattttccgaa
tcctgtgccacaatgagtatgcaagagttctatttagaattggcaaagtattttgtaaaa
aacaaactgtacaaagttttgaccatttgtattgaggggcacatactagatatagattta
tcagaggtggaacaggaggctaaggattgcattgaactgtggctgctgttcaaaagtatt
gaacaaacttctgataggcagagccatgtggtgcctgtgtataaaacctgtcaacaaata
gcaaaggacgatattgaaaactacatttctgctaatccacatttggtgttaggtatgatt
ttattggaagacaacctgaatttatttgatatattttcaaaagaacagtttttgcagttc
aaagacttcaagttgccaaataagggctacaaacataaacatccacatttgtataatgtt
tacaaaaaacatgccagcaaaaatgaaatgtatgagtgtaaggatgtgaacgtctatcaa
ttgctttctggatatcggggtctagatgtctccaagatatttgaattccaaataataaat
atgaacagtaacaatcagctacctgataaaaccgatcgacgcagtttaggaagtctaata
tcaaatgaagtagatgtacatggtctaaaagcactgactcagagaacagtagatatgcca
gattttgctaatgaaaaacttatgaaaagatatggatatgatgcaaaattaaatcatacc
tattatttgaagcagtatcgtccttgcaatgccagccaagctttcgtgtctcagcagtat
caaatatacaatcgactacaagaaaagagtattaaaagtgcttgttgcgaggcacacgct
ttagcacttcaaaattggtctgatactgcattgacagcttgcgccatttcttttgtggcg
atgatcggatgcaatcccaccagatgcagagttcacgtatcggctactaagatgataaga
aaccatctcgtgcagcgtaaaggatttcctgagaacgaagctaataaaataattaatgag
ttcatgataaaattgatccaaaacaatgacgaaactgctgcaactattctaaaatattta
gaagaaataacgtcttgtaaattgaaagaaattcaagaagcaggtggaaaacatgatatg
tctttagtattgtacgaatctcaaacaatggttaagtttgcaatgttgcacaatttgcaa
ttaccagaaatgcagcttagggaatttgtacgaaatggttcttggttcaacttcttgctt
ttcggcgatgtttttagataccctctgccccaaatgttacaattgtcgcaggacttcgaa
aagacatcatatgctgagcatttaaaatatataatggttcataaaagtgcagaagatgat
aaagaacaaaaatcaaattccagtaatggacaaaggagactcacaagactgaattcagtt
gaaacaagcccaacccagagtgtggtgtttgacttcccgccgagcacgtacatggggcgg
gagctatgggaggttgccgcggcctgccacgggccggaggaccccccggccgccttgctg
cgggctgctgacctgtaccgagagcccttgctggtgctcctcgctagctgttatgagcct
aatgcagtagacgtgctctgggctcactggatattatcttccttggagccaaatgagcgt
agtcgagaggcgttgcaaacggtgattgcgcagaacgtaccggctcagttgttccaaaaa
gttgctgaaatatgtctcgttgaaggctacattaccaccctccatgagtccatgctgata
tttatgccggaaagccctttagcgatattgacatcgttcctctatcgttgtatacgacgt
ctcacctttgattcggagactaacaagtacttgaccagtttcctccaaatttgtcaacgc
cgatacagcgtggacgccagtggtctaccgtgtgacctgtccaaagactccctgcagaga
atagccgtggccctcgttaaaatagcacttatgcacaattttgatatgccttatcatcaa
aaggaattcttgaaatgcttagctgaagcccgcttcggtaaagatctacttgttcaatcg
ccagatttcacaatgttatatgaaatttttaaaataacaatggagacttcatctgtgatg
aacatatcaaagatgctggaagatgatgcgccagcctattttctagaatgcgtagaaatg
tacactcgcgaaggaaattacgatgtagcactgcaaattgctaaactagcagcgttaccg
gttgacgaaatattgatcgccgaatgggataaaaagtgcacaagactcacaggcataatc
gtagatgacttaattgtttatgatgaagacttaacatatatcattgctcagtgtagtgag
gccttcaaggaagctggcgtatcttttaacagggcgattgagtttctttcgagagtttat
gtcgaagacttcgaacaaaagttctatgcctacagagtgattatgagttggtttgaagaa
aaccgtgtatatggtgagaagagggaagaaattgaacacgaaatgtgggacgcgtattta
cgttgtagagtaaacattgcattcaaagactatcagggtacagtgaactttgttctcaat
ggccagaaagattctaattcccaaaaagttgatttggtacacgaagaaaagcctttctcg
ttgaccttacacgagatcgaggtggaatcggatgtggtgaatatagagaacgtcgaactg
ttggaatatcccgaagacatagaccgctggaaaaaagctgtcagcgagttgttggagttg
aaattacttgtggaaggcttccggttggccgcgttgtacaaaccgcctgatgaataccga
tatgggtctcccgtgtgccccgtgcaaattataaggacatgtctacgactggcagaaggt
acatgctcgccgtacgaattgccacaggagctgcgattggtgatatcctcgcctacactt
caaaacaagttgactgtttcagaggcgtccgaaactagtttcgaagagttggtcgtgata
caggaaagacaagacggtgacggcgtgcctcacctggctgcgcgcgaggaagcggaccgc
ctgtctgcgttagaagctcttgcagtgcgcagtggcctctccgttgctaaacagatagcg
agctacttccggatcgcactacaaatcggctgggattatgcgtcagtgctgaagtaccaa
agccgtcccttggacttcattaacttggtcagcggcagagctcgaatgtcgttggcgaat
ctcgtcttccgtactttcaatataccgtctaaacaaattgcagaatacttgtgccgggag
atggtagctgcgataatatcgccacacctactgaaaacttcgacattcagacaaaaagaa
cactttcagtacactctttggggctacatcctcgattcagatatcgaaatgtttctaaac
atgcgtccagatgcttgcagtcaaatcggtcgattgattcttgaccatttaatggctttc
caaaagatttataaggcaacgggggttttgaagattcctgaaaatagtttggatgatagt
tgtctcgatgtagaaactttgatcgacgaagagtatcaaaacgtagaaggcgatgaagta
gaatcgatcatgacagaagagggcacacttatgtctgccgaaacggaatcagtgtactct
gtttccacggtctacaacgctggtaacaagatgtcacgtgactctagaagaaacttgttc
gacgtaatttctcgaagcaatattcatattagatacgaagtcaagtcgaatatccggaag
attaccaaaggtgccaaattatcaacgaaacaggtgaacataatctcgatcgagttgttg
gttctcgcacacgaatgtttttcgtgcgcgtgcgacacggagggcgttgcggtggtgctg
cgttccgcgcaggcgctgtccgcgcgactgttggccgcacgctcgtggcgactgatggtg
cggctgctaacgggccttgctcgctacacggagtgcgcttatatcttacaggcgttacgc
gaaaaccatcaatttgaattcctcctcggccagttcgactacatgctgggccaacagcag
gacaagatcgcggagttcaaacacggcttactcgacttcctgaaaacgcactgtccaggc
gacacggacacatacataatggttgcgctacatttcaacatgtactcggaagctgcgcac
gttaagaagaaacaggccaatgatctgatagatgatttggagaaaatggccagtgacgcg
tccaaaacgtctcgtagacaatctcagcccgtttggctcatgatccacgacaatgttcca
acgagatccctcctcgatacggcattgaatcattgcaacgatgcttgtgaactttacctt
caagggggttgtacgggatttgcgggagaaatggcgaacctcgcgcaaaagatagcactg
caaatatctcttctgaacgcatcgccgacgcgactcattcttaatagaagcactgaacag
acgtacagccttgtgacggaatatttaagcttcatggagggactggtacttctatcgagt
agcgggagttccgtgtggcgtgaactggcttaccgacgtgcattaacaaacgatcaggct
tacctccgcgatatggcgacttatcgacccgatatagcacacgactttataaacaggtat
aaatcggaaaagaagagaacccccgtatctcaggcggctatgacagaattgcgtaccctg
attagatga
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