KEGG   Manis javanica (Malayan pangolin): 108383780
Entry
108383780         CDS       T06054                                 
Symbol
POLR2J
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a
  KO
K03008  DNA-directed RNA polymerase II subunit RPB11
Organism
mjv  Manis javanica (Malayan pangolin)
Pathway
mjv03020  RNA polymerase
mjv03420  Nucleotide excision repair
mjv05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:mjv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    108383780 (POLR2J)
  09124 Replication and repair
   03420 Nucleotide excision repair
    108383780 (POLR2J)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    108383780 (POLR2J)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mjv03021]
    108383780 (POLR2J)
   03400 DNA repair and recombination proteins [BR:mjv03400]
    108383780 (POLR2J)
Transcription machinery [BR:mjv03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     108383780 (POLR2J)
DNA repair and recombination proteins [BR:mjv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      108383780 (POLR2J)
SSDB
Motif
Pfam: RNA_pol_L_2 RNA_pol_L SHNi-TPR
Other DBs
NCBI-GeneID: 108383780
NCBI-ProteinID: XP_017495930
LinkDB
Position
Unknown
AA seq 117 aa
MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG
YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQEGIE
NT seq 354 nt   +upstreamnt  +downstreamnt
atgaacgcccctcctgccttcgagtcgttcttgctcttcgaaggcgagaagaagatcacc
attaacaaggacaccaaggtacccaatgcctgtttgttcaccatcaacaaagaagaccac
acgctcggcaacatcattaagtcgcagctgttgaaggacccccaggtattgtttgctggt
tacaaagtcccccaccccttggagcacaagatcatcattcgtgtgcagaccacaccagac
tacagcccccaagaggccttcaccaatgccatcacagacctcatcagcgagctctccctc
ctggaagagcgattccgggtggccatcaaagacaagcaagaaggcatcgaatag

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