Manis javanica (Malayan pangolin): 108384266
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Entry
108384266 CDS
T06054
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv04390
Hippo signaling pathway
mjv04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
108384266 (SOX2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
108384266 (SOX2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mjv03000
]
108384266 (SOX2)
Transcription factors [BR:
mjv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
108384266 (SOX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
108384266
NCBI-ProteinID:
XP_017496634
LinkDB
All DBs
Position
Unknown
AA seq
320 aa
AA seq
DB search
MYNMMETELKPPGPQQTSGGGGGGGGNSTAAAAGGNQKNSPDRVKRPMNAFMVWSRGQRR
KMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTK
TLMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNGSYSMMQDQ
LGYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGMAL
GSMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQH
YQSGPVPGTAINGTLPLSHM
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggagacggagctgaagccgccgggcccgcagcaaacttcggggggc
ggcggcggcggcggcggcaactccaccgcggcggcggcgggcggcaaccagaagaacagc
ccggaccgcgtcaagcggcccatgaacgccttcatggtgtggtcccgcgggcagcgacgc
aagatggcccaggagaaccccaagatgcacaactcggagatcagcaagcgcctgggagcc
gagtggaaacttttgtcggagacggaaaagcggccattcatcgacgaggccaagaggctg
cgagcgctgcacatgaaggagcacccggattataaataccggccccggcggaaaaccaag
actctcatgaagaaggataagtatacgctgccgggagggctcttggcgccgggcggcaac
agcatggcgagcggggtcggggtgggcgccggccttggcgctggcgtgaaccagcgcatg
gacagctacgcgcacatgaacggctggagcaacggcagctacagcatgatgcaggaccag
ctgggttacccgcagcaccccggcctcaacgcgcacggcgccgcgcagatgcagcccatg
caccgctacgacgtgagcgccttgcagtacaactccatgaccagctctcagacctacatg
aacggctcgcccacctacagtatgtcctactcgcagcagggcacccctggcatggcgctt
ggctccatgggctctgtggtcaagtccgaggccagctccagcccccccgtggttacctct
tcctcccactccagggcgccctgccaggccggggacctccgggacatgatcagcatgtac
ctccccggcgccgaggtgccggagcccgccgcccccagcagactgcacatgtcccaacac
taccagagcggcccggtgcccggcaccgccattaacggcacactgcccctctcgcacatg
tga
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