Manis javanica (Malayan pangolin): 108386258
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Entry
108386258 CDS
T06054
Symbol
NLE1
Name
(RefSeq) notchless protein homolog 1 isoform X1
KO
K14855
ribosome assembly protein 4
Organism
mjv
Manis javanica (Malayan pangolin)
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mjv03009
]
108386258 (NLE1)
Ribosome biogenesis [BR:
mjv03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
108386258 (NLE1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
DSE1_N
ANAPC4_WD40
Beta-prop_Aladin
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_EML
Beta-prop_WDR19_1st
ASA1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR41
NLE
CFAP251_N
Beta-prop_VPS8
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_NOL10_N
Beta-prop_HPS5
PAC11
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_DCAF12
WD40_RFWD3
eIF2A
Beta-prop_Nup120_160
RMC1_N
Tricorn_2nd
Ge1_WD40
Beta-prop_RIG_1st
Beta-prop_NUP159_NUP214
TRM82_WD
PD40
Beta-prop_NWD2_C
DNAI3_WD
Cytochrom_D1
FAD_binding_9
PCYCGC
Motif
Other DBs
NCBI-GeneID:
108386258
NCBI-ProteinID:
XP_036864341
LinkDB
All DBs
Position
4:143033499..143042079
Genome browser
AA seq
485 aa
AA seq
DB search
MAAAAADEAVASDVQRLLVQFQDEGGQLLGSPLDVPVDITPDKLQLVCNALLAQEDPLPL
AFYIHDAEIISSLGRTLEAQAVETEKVIDIVYQPQAIFRVRAVTRCTSSLEGHSEAVISV
AFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQI
LLWDPSTGKQVGRTLAGHSKWITGLSWEPLHVNPECCYVASSSKDGSVRVWDTTAGRCER
ILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYA
LRTGAFEPAEASINAQDLQGSLQELKERALGRYSLVRGQGPERLASGSDDFTLFLWSPAE
DKKPHARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQI
AWSADSRLLVTGSSDSTLKVWDVKAQKLAIDLPGHADEVYAVDWSPDGQRVASGGKDKCL
RIWRR
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggccgcggatgaggcggtggcgagcgacgtgcagcggctgctcgtgcag
ttccaggacgagggcgggcagctgctgggctccccactcgacgtgcccgtggacatcacc
ccggacaagcttcagctcgtgtgcaacgcgctgctagcccaggaggatcccctgccattg
gctttttacatccacgatgctgagatcatctcctcgctggggaggaccctggaggcccag
gcggtggagacagagaaggttatcgacatcgtctaccagccacaggctatcttcagagtc
cgtgctgtgacccgctgcaccagctccttggagggtcacagtgaggcggtcatttccgtg
gccttcagccccacaggaaagtacctggccagtggctctggagacaccactgtgcgcttc
tgggatctaagcactgagacaccgcatttcacatgccagggacacagacactgggtcctt
agcatatcctggtccccagacggcaagaagctggcctcaggctgcaagaatggccagatt
ctcctgtgggacccaagcacagggaagcaggtgggcaggaccctcgctggccacagcaaa
tggatcacgggcctgagctgggagcccctccatgtgaaccccgagtgctgctacgtggcc
agcagctccaaggacggcagcgtgcgggtctgggacacaactgcaggccgctgtgagcgc
atcctcactgggcacacacagtcagtcacctgtctccgatggggaggggatgggcttctc
tactctgcctcccaggaccgcaccatcaaagtctggagagctcatgatggcgtgctgtgc
cggactctgcaaggccatggccactgggtgaacaccatggcactcagcactgactatgcc
ctgcgcacaggggcctttgagccagccgaggcctccatcaatgcccaagacctccaaggg
tccttgcaggagttgaaggagagggctctgggccgctacagcctcgtgcggggccagggc
ccagagagactggcgtctggctcggacgacttcaccttattcctgtggtccccagccgag
gacaagaagccccatgcacggatgacaggacaccaggcgctcatcaaccaggtgctcttc
tcccctgactcccgcatcatcgccagcgcctcctttgacaagtccatcaagctgtgggat
ggccggacgggcaagtacctggcttccctgcgtggccatgtggctgccgtgtaccagatc
gcgtggtcagccgacagccggctcctggtcactggcagcagtgacagcaccttgaaggtg
tgggatgtgaaggcccagaagctggccatagacttgccaggccacgcggatgaggtctat
gctgtcgactggagcccagacggccagagagtggcaagtggtgggaaagacaaatgtctc
cggatatggaggagatga
DBGET
integrated database retrieval system
