Manis javanica (Malayan pangolin): 108386555
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Entry
108386555 CDS
T06054
Symbol
CPSF4L
Name
(RefSeq) LOW QUALITY PROTEIN: putative cleavage and polyadenylation specificity factor subunit 4-like protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv03015
mRNA surveillance pathway
mjv05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108386555 (CPSF4L)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
108386555 (CPSF4L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mjv03021
]
108386555 (CPSF4L)
03019 Messenger RNA biogenesis [BR:
mjv03019
]
108386555 (CPSF4L)
Transcription machinery [BR:
mjv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
108386555 (CPSF4L)
Messenger RNA biogenesis [BR:
mjv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
108386555 (CPSF4L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH
Torus
zf-CCCH_2
zf-CCCH_RBM22
Motif
Other DBs
NCBI-GeneID:
108386555
NCBI-ProteinID:
XP_073089006
LinkDB
All DBs
Position
4:complement(176150029..176161694)
Genome browser
AA seq
224 aa
AA seq
DB search
MPPQQRKHDPRGICTCVRWEGAPLAPGPLRASDELYRVHLQGLGRVLAVPAGGGRGKRYC
CAGRFTFTFEKDVEMQKGTGFLPFQGMDKLGSAVCNFFTKGLWERWVWGKLCPFRHDRGE
KKVACKHWLRGLCKKGHECKVLHQYDVTRMPDCCCFSKFRDCNNRXCPFLHGMPAFKTRD
SPWYDQGFCKAGPLCKYRHVCRIMCIINYLAGFCPEGPKCQFAR
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgccaccccagcagaggaagcatgatccccggggcatctgcacctgtgtcaggtgggag
ggggcaccactggcccctggccccttaagggcatccgatgaactatatagggtccacctg
caggggcttgggcgggtattagcagtcccagcaggaggcggaagaggcaagaggtattgc
tgtgctggaaggttcacgttcacctttgagaaggatgtggagatgcaaaagggcaccggc
ttcctgccgttccagggcatggacaagttgggctcagctgtgtgcaacttcttcactaaa
ggactgtgggaaaggtgggtctgggggaagctctgcccgttcaggcacgaccgaggggag
aagaaggtggcgtgtaagcactggctccggggactgtgtaagaaggggcacgagtgcaag
gtcctgcaccagtatgatgtcaccaggatgcctgactgctgctgcttctccaagttccgt
gattgcaacaacagatgtccctttctccatgggatgccagccttcaagacccgggacagt
ccttggtatgaccaaggtttctgcaaggctggtcccctgtgcaaatatcgccatgtctgt
aggataatgtgtattattaactacttagctggcttctgccctgagggacccaaatgccaa
tttgcacggtga
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