Manis javanica (Malayan pangolin): 108386585
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Entry
108386585 CDS
T06054
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
mjv
Manis javanica (Malayan pangolin)
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mjv03036
]
108386585 (CHD9)
Chromosome and associated proteins [BR:
mjv03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
108386585 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
108386585
NCBI-ProteinID:
XP_036857364
LinkDB
All DBs
Position
Unknown
AA seq
2870 aa
AA seq
DB search
MTDPMMDFFDDANLFGETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQGTP
THQKMTDYEQLNQFDSMKFHPVNQSFGSPAEHVLSPHPQFNCSPVHPQNQPNGLFPDVGD
GSPMWGHQTATSISNQNRSPFHQQGHSHSMHHSKSFVAHHDFASFQANEQQTQCTSLHSQ
QNRNNLNPGHSSLGQSKNFMDVNVSGPHRVSVNHPPQISNASTSQQSLSRQQFSQTPNPS
VHFLKCGSRQEGNFNGPSPNMTSCSVSNSQQFSSHYSFSSNHVSPNSLLQPSAVLGPNHT
NQTLPDFPGSNSFSLRRGMKQESTQPMLNPNTSLNSNNFQMLHSSHPQGNYSNSKLSPVH
MNFPDPVDSGSQMGHFSDHVETNGFSSLEENLLHQVESQTEPFTGLDPEDLLQEDLLPQF
DESTFGQDNSSHVLDHDLDRQFTSHLVTRPSDLAQTQLHGQARTWHSSLPNHQHFHDRNR
LYLQRQPPSSKKSDVSGTYTKLQNTQVRIMSEKKQRKKVESESKQEKANRIISEAIAKAK
ERGERNIPRVMSPENFPSASVEGKEEKKGRRMKSKPKDKESKKTKTCSKLKEKTTKIGKL
IITLGKKQKRKNESSDEISDVEQMPQHTFKEEDSQKRRSNRQIKRKKYAEDAEGKQSEEE
VKGSMKIKRNSAPLPGEQPLQLFVENPSEEDAAIVDKILSSRIVKKEISPGVMIDKEEFF
VKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVEVDR
VLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQLQASRPDLRHL
DRPPSNIWKKIDQSRDYKNDNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSIT
FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHGSLISRQMIQQYEMYFRD
SQGRIIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMT
LEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQNLQAILKPM
MLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTM
MELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAG
GHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLC
TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMF
DRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIEDLLRRGAYGAIMEEEDEGSKFCEE
DIDQILLRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAI
SGRNSLVIDTPRIRKQTRPFSATKDELAELSEAESEGDEKPKLRRPCDRSNGYGRTECFR
VEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRALLAYCLIHYRGDEKIKGFIWDLI
TPTEDGQTRELQNHLGLSAPVPRGRKGKKVKTQTSSFDIQKAEWLRKYNPEQLLQDEGYK
KHIKHHCNKVLLRVRMLYYLKQEVIGSECQKVFDGVDASDIDVWVPETDHSEVPAEWWDF
DADKSLLIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDFMDGDVEDPEY
KPAPTTFKDDIEDDVSSPGDLVIADGDGHLMEGDKIYWPTQSALTTRLRRLITAYQRTNK
NRQIQQIQPTFSVPASVMRPLYEEATLNPKMAAKIERQQRWTRREEADFYRVVSTFGVVF
DPDRGQFDWTKFRAMARLHKKTDDSLEKYLYAFMSMCRRVCRLPSKEELVDPNIFIQPIT
EERASRTLYRIELLRKVREQALRHPQLFERLKFCHPNPDLPVWWECGPHDRDLLIGAAKH
GVSRTDYHILRDPELSFMIAQRNYSRSRMAHSRTSTPLLQQYQVALSAPLTSLPRLLDTK
GIILEDIKVKSESLKEEPQSSEEESMSSDETRTLIKSEPVSPKNGVLPPATGDQKSGGKG
ETDRRMVAARTEPLTPNPASKKQQVHKRGAESSSDSDSDSERSSCSSRSSTSSSSSSSCS
HSRSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSSEECDSEEEEVQKRDFLREALLKRKL
ELVHTPYSIFKDRVMINRLDSICQTVLKGKWPSARRSYDTNTVASFYTTKLLESPGAATE
YNEPSVPTPPGAGVKEEHDQSAQMSKVKKHVREKEFTVKIKDEGGLKLTFQKQGLAQKRP
CDGEDSALGQQQYLARLRELQSASDTSLASFPRSGPVLGASIQSTLGANGVILDNQPTVK
KRRGRRKNVEGVDILFFNRNKPPNHVSLGLSTSQISTGINPSLSYTQPQGIPDIESPVPV
INLKDGTRLAGDDAPKRKDLEKWLKEHPGYVEDSGAFIPRVQLHEGRPKQKRHRCRNPNK
LDVNSLTGEERVQLINRRNARKVGGAFAPPLKDLCRFLKENSEYGVAPEWGDVVKQSGFL
PESMYERILTGPVVREEVSRRGRRPKSGIVKATAAAAAATTSRVPGNPLLANGLLPGVDL
STLQALQQNLQNLQSLQVTSGLMGMPAGLSSRGEAKNVAAMFPMLLSGMTGLPNLLGMGG
LLTKPAESGTEGKNGNDSKELEGKKERTENQNSENGGENCVTSSPSASSTAALNTAAAAS
PLALNPLLLSNILYPGMLLTPGLNLHVPTLSQSNTFDVQKNKKSDLGSSKSVEIKEEDSR
VKDQEDKGGTDPSPLNENSTDEGSEKADDASSGSDSTSSSSEDSDSSNED
NT seq
8613 nt
NT seq
+upstream
nt +downstream
nt
atgacagatccaatgatggacttttttgatgatgccaatctttttggtgaaaccttagaa
ggtttgtcagatgatgcatttgtacaaccaggacctgtttcactagtcgatgaattgaac
ttgggtgcagaatttgaacctttgcacatagactcactgaaccatgttcagggtactcca
acacatcagaaaatgactgattatgagcagttaaatcagtttgattcaatgaaatttcat
ccagttaatcagtcttttggtagcccagctgaacatgtgttatctccacaccctcagttt
aattgttctccagtccacccccaaaaccaacccaatggtttgtttccagatgtaggagat
ggtagtccaatgtggggccatcagacagctactagcatttcaaatcaaaataggtctcct
tttcaccaacaaggacattctcactctatgcatcacagtaaaagctttgtggcacaccat
gattttgcctcatttcaggccaatgaacaacaaacacagtgcacttcacttcactcacaa
caaaaccgaaataatcttaacccagggcatagttctctaggccagtctaaaaattttatg
gatgttaatgtttctggtccacacagagtcagtgttaaccacccgccacaaatttctaat
gcatctacttcacaacagtctctttcgaggcagcagttttcgcagacgccaaatccttca
gtacacttcctcaagtgtggcagtcgtcaggaaggaaattttaatggaccttctccaaat
atgacttcttgttctgtcagtaattcacagcagttttcttcccactattccttttccagt
aatcatgtatcaccaaatagtctcctccagccctctgcagttcttggacctaatcataca
aatcagactttacctgattttcctggaagtaattccttttcacttcgtaggggaatgaag
caagaatccactcagcctatgctaaatcccaatacgtcactcaattcaaataattttcaa
atgttgcattcatcacatcctcagggtaattacagcaattcaaaattatctcctgtgcac
atgaacttcccagatcctgttgattcaggaagccaaatgggccatttcagtgatcatgta
gaaactaatggcttttcatctttagaagagaatttacttcatcaggtagaatctcaaact
gagccattcacaggacttgatccagaggacctccttcaggaggatctcctgccccaattt
gatgagtcaacatttgggcaagataattcaagtcatgttttagatcatgaccttgatcgg
cagtttacttcgcatcttgtaacgcggccttctgatttggctcaaactcagttacatggt
caggctcggacttggcattcatcacttcctaatcatcaacattttcatgacagaaatcgc
ctgtacttacagagacagcctccatcttccaagaagagtgatgtttctgggacatatact
aagttgcagaatacccaggtgaggatcatgtctgagaagaagcaaagaaaaaaggtggaa
tcagaaagcaagcaagaaaaggctaatcgtataatatcagaggccatagcaaaagcaaag
gagcgtggggaacgcaatattccacgagtaatgagccctgaaaactttcctagtgcttca
gttgaaggaaaagaggaaaagaaaggtagaaggatgaaatctaagccaaaggacaaagag
agcaagaaaacaaaaacttgttccaagttaaaagagaagacgacaaaaattggcaaactc
attattacattgggtaaaaaacaaaaaagaaagaatgagtcttcagatgaaatatctgat
gtggagcagatgccacagcatacattcaaagaggaagactctcaaaaaagaagatcaaat
cgacaaattaaaagaaaaaaatatgcagaagatgcagaagggaaacaatcggaagaagag
gttaaaggctccatgaaaataaaaaggaattcagctcctttacctggtgaacagccttta
caattatttgtggagaatccaagtgaagaagatgctgcaattgtggacaaaatattatct
tctagaattgtaaaaaaagaaatatcacctggagtaatgattgacaaggaagaatttttt
gtaaaatataagaattactcctatcttcactgtgagtgggccacagaacagcagcttttg
aaagataaaaggatccagcagaaaatcaaacgattcaaattgagacaagcacaaagagca
catttttttgcagacatggaagaggaaccatttaacccagactacgttgaagtagacaga
gtattagaagtctctttttgtgaggataaagatactggcgagcctgttatttactactta
gtaaagtggtgttcattaccatatgaagatagtacttgggaactaaaagaagatgttgat
cttgcaaaaatagaagagtttgaacaattgcaagcttcaagacctgacctgagacatttg
gaccgtcctccctctaatatttggaaaaaaatagatcaatccagggattataaaaatgac
aatcaactcagggaatatcagctggaaggactcaactggctcttgttcaattggtacaat
agacgaaactgcattttagcagatgaaatgggtcttggcaaaaccattcaatcaattaca
ttcctctacgaaatccttctgactggtataagaggaccttttctgattattgctccactc
tctactattgcaaactgggagagagaatttcgtacgtggactgatattaatgttgtggtt
tatcatgggagcctgataagcagacagatgatacagcaatatgagatgtacttcagggac
tcacagggtcgtatcatacgaggagcttacagattccaagccatcatcaccacttttgaa
atgattcttggaggctgtggagagcttaatgcaattgaatggcgatgtgtgattattgat
gaagcacacagattaaaaaacaaaaattgtaaactcctagagggtctgaaactcatgact
ctggaacacaaggtgcttttgactggcacacctctccaaaatacagttgaagaattattc
agtcttcttcactttctagaacccttaaggtttccttctgagtcaacatttatgcaagaa
tttggggatctgaaaacagaggaacaggtacagaatcttcaggctatcctgaaaccaatg
atgctgagacgattgaaagaagatgtagaaaagaagttggcaccaaaggaagaaaccatc
attgaagtggaacttactaacattcagaagaaatactaccgagctattttggagaagaac
ttttcatttttatccaaaggagcagggcagactaatgtccctaacttggtcaatactatg
atggagctcagaaagtgctgtaatcatccatatcttatcaaaggtgctgaggagaaaata
cttggagaatttagagatacatataatccagctgcttctgattttcatctccaagcaatg
atccagtctgctggtaaattggtccttattgataaattgcttcctaaaatgaaagcaggt
ggtcacaaagtactcatcttctctcagatggtacgctgccttgacatcctggaggactat
ctcatacataaaagatatttatatgagcgaattgatggaagagtcagagggaatcttcga
caagcagctatagatcgatttagtaaacctgattcagatcgatttgtttttcttttgtgt
acccgagctggtgggttgggcatcaatttaactgcagctgatacatgtataatttttgat
tctgactggaatcctcaaaatgatcttcaggcccaagctcgttgccacagaattggtcag
aataaagcagttaaagtctaccgactagtaactcgtaactcatatgagagagaaatgttt
gaccgagccagtctgaaactgggtctcgataaggctgtgttacagagcatgagtggaaga
gaaagtaatgttggtggtattcaacagctttccaaaaaggaaatagaagatctgcttcga
agaggtgcttatggtgccattatggaagaagaagatgaaggctctaaattctgtgaagag
gatattgatcagattctactacgtcgtacaaaaactattacaattgaatcagaaggacgt
gggtcaacatttgccaaggcaagctttgtggcatctggaaaccggactgatatttcctta
gatgatcccaacttctggcagaaatgggctaaaaaggcagaaatagatatagatgccata
agtggcagaaacagtttggttattgacactccaagaattagaaagcaaacaagacccttt
agtgccacaaaagatgaattggctgaattatctgaagctgaaagtgaaggtgatgaaaag
cccaaactccggagaccctgtgatcgttccaatggctatggaagaactgaatgctttaga
gtagagaaaaatctgctagtttatggatggggccgatggagagagattctgtctcatggc
cgttttaaaaggcagctaaatgagcatgatgtagaaataatttgccgagcactcttagca
tattgccttattcactatcgaggagatgagaaaattaaaggcttcatatgggatctcatt
actccaactgaggatgggcagactcgagagctacaaaatcatctaggtctatcagcccct
gtacccaggggccgaaaaggaaagaaagtaaagactcaaacaagttcatttgatatacag
aaagcagaatggcttcgaaaatacaatcctgaacagctacttcaagatgaaggctacaaa
aaacatataaaacaccactgtaataaggttttgcttcgtgtgagaatgctctattaccta
aagcaagaagtcattggaagtgagtgtcagaaagtatttgatggagttgatgcaagtgac
attgatgtttgggtcccagaaacagaccactcagaagttcctgctgaatggtgggatttt
gatgctgataagtcactccttattggagtttttaaacatggttatgaaaagtacaacact
atccgagctgacccagcactgtgctttttggaaagagtgggaaaaccagatgagaaagca
gttgctgcagaacagagggcaaatgactttatggatggggatgtggaagatccagaatac
aaacctgcccccactacttttaaagatgatatagaggatgatgtttcctcaccaggagat
cttgttatagcagatggagatggtcatctgatggagggtgataaaatttattggcctact
cagtcagctttgaccacacgtttgaggcgtctcatcactgcatatcagcgtactaataaa
aacagacaaattcagcagatacaacctactttctcagtgcctgccagtgtgatgcgtcct
ctttatgaagaagccactcttaatccaaaaatggcagccaagatagaaagacagcagaga
tggacaagaagagaagaagctgacttctatagagttgtatctacttttggagtggtattt
gatcctgacagaggccaatttgattggacaaaatttagagctatggctaggctacataag
aaaactgatgatagtctggagaaatatttgtatgcattcatgtctatgtgtcggcgagtt
tgtcgccttccttccaaagaagaattggtggatccaaatatttttatccagccaatcaca
gaagaacgtgcttctaggactctgtatcgcattgaacttctaaggaaggtacgggaacag
gccctccgacatccacaattgtttgaacgcctgaagttttgccatccaaatccagactta
ccagtctggtgggaatgtggccctcatgatagggacttgcttattggagctgccaaacat
ggagtgagccgaacagactatcacattcttcgtgatcctgaactgtcatttatgatagct
caaaggaactatagtcgaagcaggatggctcattcaaggacttctaccccccttttacag
caataccaagtagcactttctgctcctcttacctctctaccaaggctcctagatactaaa
ggtattattttagaggatatcaaagtgaaaagtgaaagcctgaaagaggagcctcagtct
tctgaagaagaatccatgtcttctgatgaaaccaggacactaataaagtctgagcctgta
agtccaaagaatggtgtcttaccaccagctaccggagaccagaaatctggtggaaaaggt
gaaacagaccgacgcatggttgcagccagaacagaacccctaactccaaacccagcttct
aagaaacagcaagtccacaaaagaggagcagaatctagttctgactctgactctgactct
gagagatcatcgtgttcttccagatcttccacctcctcgtcttcctcctcctcctgttcc
cactctcgatcaggctcaagttcttcttcatcctcctcttgctcttcagcatcttcatcc
tcatcctcctcctcttcatcttcctcctcctcttcatcttcatcagaagaatgtgacagt
gaagaagaggaagtccagaagcgagattttcttagagaagcactattgaaaaggaaatta
gaactggtacacactccctattcaatattcaaggatcgtgtgatgatcaaccgtctggac
agtatttgtcaaacagttctgaaaggaaagtggccctcagctagaagaagttatgatacc
aacacagtggcttctttctataccacaaaactgctggagagccctggtgcagctacagaa
tataatgaacctagtgtacctactcctccaggtgccggtgttaaagaagaacacgatcag
tcagcacagatgtcaaaggtgaagaagcatgtacgagaaaaggagtttacagtgaaaatc
aaagacgaaggtggtttgaagctgacatttcagaagcaggggcttgctcagaaaagacca
tgtgatggcgaggacagcgccctggggcagcagcagtaccttgcgcggttgcgggagctg
cagagcgcatctgacaccagcctcgccagtttcccgagatctgggccagtattgggtgct
tcgattcagtccacccttggtgccaatggagttatattagacaaccagcctacagtcaaa
aaaaggagaggaaggagaaagaatgtagaaggtgttgacatcctcttttttaacagaaat
aaaccacctaatcatgtttctttaggcttatcaacctcacagatttctacagggataaat
ccatcactatcctatactcaacctcaaggaattcctgatatagaaagtccagttccagtt
attaatcttaaagatgggacaagacttgcaggtgatgatgcaccaaagagaaaggatttg
gaaaaatggcttaaggagcacccgggttatgtggaagattcaggagcttttattcctaga
gtgcagctccatgaggggagacccaaacaaaaaaggcatcgttgcagaaaccccaataaa
ctagatgttaatagtctcactggagaagaacgtgttcagctgattaatagaagaaatgcc
agaaaggttggaggtgcatttgctccccctttgaaagatttatgtagattcctgaaggaa
aattcagagtatggagtagctcctgaatggggagatgttgttaagcaatctggatttctt
ccagaaagtatgtatgaacgtatactcactggtcctgttgtgagagaggaagtaagcagg
cgagggaggaggcctaaaagtggaattgtgaaggccacagcagcagctgcagctgcaacc
acctccagggtgccaggcaaccctctgctagccaatggattacttccaggcgtggatctc
tccactcttcaggccttacaacaaaacctacagaacttgcagtcactgcaggtcacttcg
gggctaatgggaatgcctgctggcctttcttcccgaggagaagctaaaaacgtggccgcc
atgttccccatgttgctgtcaggaatgactgggttgccaaatctgttgggcatgggagga
ctcctgacaaagcctgcagaatctggaacagaaggaaaaaatggaaatgactctaaggag
ctagaaggaaaaaaagaaaggacagagaaccaaaattcagagaatggcggagaaaactgt
gtgacaagttctccttcagcatcctctactgctgcattgaacacagctgcagctgccagc
ccgctagctcttaaccctctgttactttctaacatactttatccagggatgcttctcact
ccaggccttaatcttcatgttccaactttgtctcagtccaatacttttgatgtacagaaa
aacaaaaagagtgatttaggctcatctaaatctgtagaaataaaggaagaagattccaga
gttaaagatcaggaagacaaagggggaactgacccaagtcccctcaatgaaaacagcaca
gatgagggttcagagaaagccgacgatgcttcatctggatctgatagtacatcatcgtca
tctgaggattcagattctagcaatgaagactga
DBGET
integrated database retrieval system
