Manis javanica (Malayan pangolin): 108387232
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Entry
108387232 CDS
T06054
Symbol
DHX8
Name
(RefSeq) ATP-dependent RNA helicase DHX8 isoform X2
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108387232 (DHX8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mjv03041
]
108387232 (DHX8)
Enzymes [BR:
mjv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108387232 (DHX8)
Spliceosome [BR:
mjv03041
]
Complex C
Other components
Step II factors
108387232 (DHX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
Flavi_DEAD
AAA_16
T2SSE
TsaE
PhoH
Sigma54_activ_2
OB_RRP5_4th
ABC_tran
Motif
Other DBs
NCBI-GeneID:
108387232
NCBI-ProteinID:
XP_017500931
LinkDB
All DBs
Position
Unknown
AA seq
1224 aa
AA seq
DB search
MAVAVAMAVAVSGTELGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKN
TTFDTFKASLVKNGAEFTDSLISNLLRLIQTMRPPAKPSTSRDPVVKPKTEKEKLKELFP
VLCQPDNPSVRTMLDEDDVKVAVDVLKELEALMPSAAGQGKQRDTEHRDKTKKKKRSREQ
DRDRDRDRDRDRDRDRDREREHKRRHRSRSRSHSRTRERNKGKSRYRSRSRSQSPPKDRK
DRDKYVERSLDRWRDKHVDRPPPEEPAIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVH
ISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNLVG
ETNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAANVLSKEEF
PDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAA
MMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPNDIP
EWKKHAFGGNKASYGKKTQMSIIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTT
QITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPET
VIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVT
SATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDI
LVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVV
IATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGP
GKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLIT
AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN
VFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQ
DIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIH
PSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQ
RLEPLYNRYEEPNAWRISRAFRRR
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgtggctatggcggtggctgtaagcgggacagagctaggccccgcggaa
gaactcgctaagctcgagtatctttctttggtgtcgaaggtttgcaccgaactggacaat
cacttggggatcaacgacaaggatctggctgaatttgtgatcagtcttgctgaaaaaaat
accacctttgatacttttaaggcttctctggtcaaaaatggtgcagaattcacggattct
cttattagtaacttgctgcgtctcatacagaccatgcggcctccagcaaagccttctacc
agcagagatccggttgttaaacccaaaactgagaaagaaaagctgaaagaactcttccca
gtcctttgtcaaccagacaacccttctgttcggaccatgctggacgaggatgatgtgaaa
gttgctgtggatgtcctgaaagaactggaggccttaatgcccagtgcagcaggccagggg
aagcaaagagacactgagcaccgggacaagacaaagaagaagaagcggagccgagagcaa
gatcgagaccgagacagagatagagaccgagaccgagaccgagaccgagaccgagaaaga
gagcacaagaggagacaccggtcccgctctcggtcacattccaggacccgggagagaaat
aaagggaagtctagataccggtccaggagcagaagtcagagtccccccaaagaccggaaa
gaccgagacaagtatgtggagagaagtctggacagatggcgggataagcatgtggaccgc
cctcccccagaagagcccgccatcggggacatttacaatggcaaagttaccagcataatg
cagttcggatgctttgtacagctggagggactaaggaagcggtgggaaggcctagtgcac
atctctgagctccggcgggaaggccgtgtggccaatgtggctgatgtggtgagcaaaggc
cagagggtcaaggtcaaagtgctgtccttcacggggaccaagaccagtctgagcatgaag
gatgtggatcaagagacaggagaagatctaaacccaaatcgacgacgaaaccttgtcggg
gagaccaatgaggaaacttcaatgaggaatccagacagacctactcacctctcccttgtc
agtgcccctgaagtagaggacgactcactggagcgcaagcgccttacccgcatctctgac
ccggagaagtgggagatcaaacagatgattgctgccaatgtcctttccaaagaagaattt
ccagactttgatgaagagaccggcattctccctaaggtggatgacgaagaagatgaggac
cttgagattgaactggttgaggaagagcctccattcctgagagggcacaccaagcagagc
atggacatgagccctattaaaatcgttaagaacccggatggctccctctcccaagcagca
atgatgcagagcgctttggccaaagaaaggcgggaactcaagcaagcccagcgggaagct
gagatggattctattcccatgggactcaataaacactgggttgaccctctgcctgatgcg
gaaggcaggcagattgctgccaacatgaggggtattgggatgatgcctaacgacattcct
gaatggaagaagcatgcttttgggggaaacaaagcttcttacggaaaaaagacccagatg
tcaatcattgagcaaagagagagcctgcccatttacaaactgaaggagcagctggtccag
gctgtccacgacaatcagatcttgattgttattggtgagacaggatctgggaagacaaca
cagatcacccagtacctggcggaggcaggctacacttccaggggcaagattggatgtacc
cagcccagaagagtggcagccatgtcagtggccaaaagagtgtcggaggagtttggttgt
tgcttaggccaagaggtgggctacaccattcggtttgaggactgcaccagccctgaaaca
gtcatcaagtacatgacagacggaatgttgctccgagagtgcctgattgaccccgacctc
actcagtacgcgatcatcatgttggatgaggcccacgagaggacaattcacacagatgtg
ctctttggattgttgaaaaagacggttcagaaacggcaggatatgaagctgattgtcact
tcagccaccttggatgcagtgaagttttcccaatatttctatgaagctcccatcttcacc
atcccaggtcgaacatatccagtggaaatactgtacacaaaggaacctgagacagattat
ctggatgccagcttgatcactgtcatgcagatccatttaacagaaccaccaggggatatc
ctggtcttcctgactggtcaggaagagatcgacactgcttgtgagatcctgtatgaaaga
atgaaatccctgggacctgatgttccagagttgattattctcccagtgtactctgctctt
cccagtgagatgcagacccgaatcttcgatccagctccacctggcagcagaaaggtcgtg
attgccaccaacattgcagagacatctctgactattgatggcatctactatgtggtggac
cctggatttgtgaagcagaaagtttacaattccaagacagggatcgaccagctcgtggtg
actcctatttctcaggctcaggcaaagcaacgagctggcagagctgggagaacaggccca
gggaagtgttacaggctctacacagaacgcgcctaccgagatgaaatgctgaccaccaat
gtgccagaaatccagagaaccaacttagcaagcacagtgctctcactcaaggccatgggc
atcaatgacctgctgtcctttgatttcatggatgccccaccaatggaaactttgatcaca
gccatggagcagctgtacacactgggggccctggatgatgagggcctgcttactcgcctg
ggccgcaggatggcagaattccctctggagccaatgctgtgtaaaatgttgatcatgtct
gtgcatctgggctgcagtgaggaaatgctgactatcgtgtccatgttgtctgtgcagaac
gtcttctacaggcccaaggataaacaagcccttgcagatcagaagaaggccaaattccac
cagactgaaggggaccacctcaccctgctggctgtgtacaactcctggaagaataacaag
ttctccaacccatggtgttacgagaactttatccaggctcgttctctgcgccgggcccag
gacattcgcaagcagatgttaggcataatggacagacacaagctagatgtggtctcttgt
ggcaagtccacggtccgagtgcaaaaggccatctgcagtggattcttccgaaatgctgcc
aagaaagacccacaggagggttaccggacactgatcgaccagcaggtggtctacatccac
ccttccagtgctctcttcaaccggcagccagaatgggtggtgtaccacgagctggtgctg
accacaaaggagtacatgcgtgaggtcaccaccattgaccctcggtggctcgtggagttt
gctcctgccttctttaaggtctctgacccaaccaagctaagcaaacagaagaagcagcag
cgtcttgaacccttgtacaaccgctatgaggaacccaacgcctggagaatatcccgggcc
ttccggcggcgctga
DBGET
integrated database retrieval system
