Manis javanica (Malayan pangolin): 108387304
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Entry
108387304 CDS
T06054
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4 isoform X1
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108387304 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mjv03041
]
108387304 (PRPF4)
Spliceosome [BR:
mjv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
108387304 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
PRP4
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_EML
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_IFT140_1st
WD40_like
WD_LRWD1
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_WDR11_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
108387304
NCBI-ProteinID:
XP_017501021
LinkDB
All DBs
Position
Unknown
AA seq
522 aa
AA seq
DB search
MASSRTSSTQATKTKAPDDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGI
EAGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPIT
LFGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYHQTWYHEGPNSLKVARLW
IANYSLPRAMKRLEEARLHKEIPETTRTSQVQELHKSLRSLNNFCSQIGDDRPISYCHFS
PNSKMLATACWSGLCKLWSVPDCNLLYTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCA
ADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILH
QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGY
HVATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIQGNFLLTGAYDNTAKIWTHP
GWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcgcgaacctcttccacgcaggcaaccaaaactaaggcacctgatgactta
gtcgctcctgttgtgaagaaaccacacatctattatggaagtttggaagagaaggagagg
gagcgtctggccaaaggagaatctgggattttgggaaaagaaggacttaaagccggaatt
gaagcaggaaatattaacataacctcgggagaagtgtttgaaattgaagagcacatcagt
gagcgacaggccgaagtattagctgagtttgagagaaggaagcgagcccggcaaatcaat
gtttccacagatgactcagaggtcaaggcttgccttagagccttgggagagcccatcaca
ctttttggagagggtcctgctgaaagaagagaaaggttaagaaatattctctcagtggtc
ggtactgatgccttaaaaaagaccaaaaaagatgacgagaaatctaagaagtccaaagaa
gagtatcatcaaacctggtaccacgaagggccaaacagcctgaaggttgctagactatgg
attgctaattattcactgcccagggcaatgaaacgcttggaagaggcccgtctccataaa
gagattcctgagacaacaagaacctcccaagttcaagaactgcacaaatctctccggtct
ttgaataatttctgcagtcagattggagatgatcggcctatctcctattgtcactttagt
cctaattccaaaatgctggccacagcttgttggagtgggctttgcaagctctggtctgtt
cctgattgcaaccttctttacactcttcgaggtcataacacaaatgtaggagcaattgta
ttccatccaaaatccactgtctccttggaccagaaagatgtcaatctagcttcttgtgct
gctgatggttctgtgaagctttggagccttgacagtgatgaaccagtggcagatattgaa
ggtcacacggtgcgtgtggcccgtgtaatgtggcacccatccgggcgtttcttgggtacc
acctgctatgaccgctcatggcgcttatgggatttagaggctcaggaagagatcctgcat
caggaaggccacagcatgggtgtatatgacatcgccttccatcaagatggctctttggct
ggcactgggggactggatgcatttggtcgagtttgggacctgcgcacaggacgttgtatc
atgttcctagaaggccacttgaaggaaatctatggaataaacttctcccccaatggctat
catgttgcaactggcagtggcgacaacacctgcaaagtgtgggaccttcgacagcggcgt
tgtgtctacaccatccctgcccatcagaacttagtgactggtgtcaagtttgagcctatc
caggggaatttcttgctcactggggcctatgataacacagccaagatctggacccaccca
ggctggtctccactgaagactctggccggccatgaaggcaaagtgatgggcctggacatt
tcttccgatgggcagctcatagccacttgctcatatgacaggaccttcaagctgtggatg
gctgaatag
DBGET
integrated database retrieval system
