Manis javanica (Malayan pangolin): 108387322
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Entry
108387322 CDS
T06054
Symbol
PMS1
Name
(RefSeq) PMS1 protein homolog 1
KO
K10864
DNA mismatch repair protein PMS1
Organism
mjv
Manis javanica (Malayan pangolin)
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mjv03400
]
108387322 (PMS1)
DNA repair and recombination proteins [BR:
mjv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
108387322 (PMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
HMG_box
HATPase_c_3
HMG_box_2
HATPase_c
HMG_WDHD1
HMG_box_5
Motif
Other DBs
NCBI-GeneID:
108387322
NCBI-ProteinID:
XP_017501049
LinkDB
All DBs
Position
Unknown
AA seq
931 aa
AA seq
DB search
MKQLPAATVRLLSSSQIITSVVSVVKELVENALDAGATSIDVKLENYGFDKIEVRDNGEG
IKAIDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCVAEVLITTRTAADNFSTQ
YVLDGSGHIISQKPSHVGQGTTVTALKLFKNLPVRKQFYSTAKKCKDEIKKVQDLLISYG
ILKPDLRIVFIHNKAVIWQKTRVSDQKMALMSVLGTAVMGNMESFQYHSEESQIYLSGFL
PKHDADHSLTSLSTPERSFIFINSRPVHQKDILKLIRHYYSLKCLKESTRSYPIFFLKID
VPTADVDVNLTPDKSQVLLQNKESVLITLENLMMTCYGSLPSTNSYENSKPDVFSADMVV
RKTTETDVLFNKTESSGNNYPNLDTSAFPFQNDVHNDESGKNTNYCLNHQVHVGDHYNDH
FSSENSSIDKNTRSTFQEILMNNLSCEDAQKEYSEMCFVDSVEHTESENGNKSHIDDSGK
NEEAVLGKSPEIYADDWSKGNVLNLMGENIEPVKILVPQESSACKVSNNNSHLNPEQKNL
SEGSCNKKSNVVDNKCGQLIAYDLISNRVIKKPMSARTLFVQDHRAQFLTENSKTSLDDA
TLQIEELWKTLSEEEKLKYEEKATKDLERYNRQIKRATEQESQVSLQDGRKKIKRTSTWN
LVQKHKLKTSLSSQPKLDELFQSQIEKKKNQNVKIVQIPFSMENLKKIFEKHTKFDLEEK
DELYLIHNLKLPDAWLITSKTEVMLLNPYRVEEALLFKRLLENHKLPAEPLEKPIVLTES
LFNGSHYLEILYKMTTDDRRYNGSIYLSDPRLTANGFKIKLMPGVSIAENYWEIEGMANC
LPFYGVMDLKEILNAVLNKNAKEVYECRPRKVISFLEGEAVRLCRQLPMYLSKEDIQDII
FRMKQQFGNEIKGCVHGRPFFHHLTHVPEDT
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagttgcctgcagcaacagttcgcctcctttctagttctcagataatcacttca
gtggtcagtgttgtaaaggagcttgttgaaaatgccttggatgctggtgccacaagcata
gatgttaaattggagaactatggatttgataaaattgaggtgcgagacaatggtgagggt
attaaggccattgatgcacctgtaatggcaatgaagtactacacctcaaaaataaatagt
catgaagatcttgaaaatttgacaacttacggttttcgtggagaagcattggggtcaatt
tgttgtgtagctgaggttttaattacaacaaggacagctgctgataattttagcacccag
tatgttttagatggcagtggccacataatttctcagaaaccttcacatgttggtcaaggt
acaactgtaacagctttaaaattatttaagaatctacctgtaagaaagcaattttactca
actgccaagaaatgtaaagatgagataaaaaaggtccaagatctcctcataagctatggt
atacttaaacctgatttaaggattgtttttatacataacaaggcagttatttggcagaaa
actagagtatcagatcaaaagatggctctcatgtctgtcctggggactgctgttatgggc
aatatggaatcctttcagtaccactctgaagaatctcagatttatctaagtggatttctt
cctaagcatgatgcagaccactctttgacaagtctttcaaccccagaaaggagtttcatc
tttataaatagtcgaccagtacaccaaaaagacatattaaagcttatccgacattattac
agtctgaagtgcttaaaggaatctactcgttcatatcccattttctttctgaaaattgat
gttcctacagctgatgtggatgtaaatctaacaccagataaaagtcaagtattactacag
aataaggaatctgttttaatcactcttgaaaatctgatgatgacttgttatggatcacta
cccagtacaaattcttatgaaaatagtaaaccagatgttttctcagctgacatggttgtt
cgtaaaacaacagaaacagatgtactttttaataagacagagtcatctggaaataattat
ccaaatcttgatacttcagcctttcctttccaaaatgatgtgcataatgatgaatctggg
aagaacactaattattgtttaaatcatcaggtacatgttggtgaccattataatgatcat
tttagtagtgaaaattctagcattgataaaaacactagaagtacatttcaggagatccta
atgaataatttatcatgtgaggatgcccagaaggaatacagtgaaatgtgttttgttgat
tctgttgagcacaccgaatcagaaaatggcaataaaagtcatatagatgacagtgggaaa
aatgaagaagcagttcttggtaagtctccagaaatttatgcagatgactggagcaaagga
aatgtacttaatttgatgggggaaaacattgaacctgtgaaaattttagtgcctcaagaa
agttcagcatgtaaagtaagtaataataatagtcatctaaaccctgaacaaaagaatctc
agtgaaggttcctgtaacaaaaaatcaaatgtggtagataacaaatgtggacagcttata
gcttatgatttaattagtaatcgagtaatcaagaaacccatgtcagcaaggacacttttt
gttcaagatcatcgtgctcagtttctcacagaaaattctaagaccagtttggatgatgca
acgttacaaattgaagaactgtggaagacattgagtgaagaggagaaactgaaatatgaa
gagaaggctactaaggacttggaacgatacaataggcagatcaagagagccactgaacag
gagtcacaggtatcattacaagatggcagaaaaaagataaaacgcaccagcacatggaat
ttggtacagaagcacaaattgaaaacttcattatctagtcagccaaaacttgatgaactc
ttccagtcccaaattgaaaaaaagaagaaccaaaacgttaaaatagtgcagatccccttt
tctatggaaaacttaaaaaaaatttttgagaaacatacaaaatttgacttagaagagaag
gacgaactttacttgatccacaatctcaagcttcctgatgcatggctaattacatccaaa
acagaggtaatgttattaaatccgtacagagtggaggaagccctgctatttaaaagactt
cttgagaatcataaacttcctgcagagccactggaaaagccaatcgtattaacagagagt
ctttttaatggatctcattatttagagattttatataaaatgacaacagatgaccgaaga
tacaatggatcaatttacctgtcggatcctcgtcttacagcaaatggtttcaagataaaa
ttgatgccaggagtttccattgctgaaaactactgggaaatagaaggaatggctaattgt
ctcccattctatggagtaatggatttaaaagaaattcttaatgctgtattaaacaaaaat
gcaaaggaagtttatgagtgtagacctcgcaaagtgataagttttttagagggagaagca
gtgcgtctatgtagacagttacccatgtacttatcaaaagaggacatccaagacattatc
ttcagaatgaagcagcaatttggaaatgaaattaaaggatgtgttcacggtcgcccattt
tttcatcatttaacccatgttccagaagatacatga
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