Manis javanica (Malayan pangolin): 108387610
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Entry
108387610 CDS
T06054
Symbol
CHD4
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 4 isoform X1
KO
K11643
chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv03082
ATP-dependent chromatin remodeling
mjv05165
Human papillomavirus infection
mjv05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108387610 (CHD4)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
108387610 (CHD4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
108387610 (CHD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mjv03036
]
108387610 (CHD4)
Chromosome and associated proteins [BR:
mjv03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
108387610 (CHD4)
Chromatin remodeling factors
NuRD complex
108387610 (CHD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
ResIII
HDA2-3
PHD-1st_NSD
PHDvar_NSD
HTH_Hrp3
PHD_2
DEAD
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
108387610
NCBI-ProteinID:
XP_017501383
LinkDB
All DBs
Position
Unknown
AA seq
1939 aa
AA seq
DB search
MASGLGSPSPCSAGSEDEDIDALLNNSLPPPHPENEEDPEEDLSETETPKLKKKKKPKKP
RDPKIPKSKRQKKERLLLCRQLGDSSGEGPEFVEEEEEVALRSDSEGSDYTPGKKKKKKL
GPKKEKKSKSKRKEEEEEDDDDDDSKEPKSSAQLLEDWGMEDIDHMFSEEDYRMLTNYKA
FSQFVRPLIAAKNPKIAVSKMMMVLGAKWREFSTNNPFKGSSGASVAAAAAAAVAVVESM
VTATEVAPPPPPVEVPVRKAKTKEGKGPNARRKPKGSPRIPDAKKPKPKKVAPLKIKLGG
FGSKRKRSSSEDDDLDVESDFDDASINSYSVSDGSTSRSSRSRKKLRTTKKKKKGEEEVT
AVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ
WEAKEDNSEGEEILEEVGGDPEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPL
PEIPNGEWLCPRCTCPALKGKVQKILIWKWGQPPSPTPVPRPPDADPNTPSPKPLEGRPE
RQFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKN
KDPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDVE
IQDYDLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLD
ATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLV
SAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKE
ASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLL
TGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLKA
DVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCN
HPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLD
LLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADT
VIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVVR
PGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGDNKEGEDSSVIHYDDKAIERLLDR
NQDETEDTELQGMNEYLSSFKVAQYVVREEEMGEEEEVEREIIKQEESVDPDYWEKLLRH
HYEQQQEDLARNLGKGKRIRKQVNYNDGSQEDRGVCGRPHPPPIGRSTRAVGPAHLPSLP
PDWQDDQSDNQSDYSVASEEGDEDFDERSEAPRRPSRKGLRNDKDKPLPPLLARVGGNIE
VLGFNARQRKAFLNAIMRYGMPPQDAFTTQWLVRDLRGKSEKEFKAYVSLFMRHLCEPGA
DGAETFADGVPREGLSRQHVLTRIGVMSLIRKKVQEFEHVNGRWSMPELAEVEENKKMSQ
PGSPSPKTPTPSTPGDTQPNTPAPAPPVEDGIKIEENSLKEEESAEGEKEVKSVAPEATV
ECTQTPAPASEDEKALVEPPEGEEKEKAEVKERTEEPMETEPRGVTDVEKAEEKSAVDLT
SIVVEDKEEKKEEEEKKEVMLQNGETPKDLNDEKQKKNIKQRFMFNIADGGFTELHSLWQ
NEERAATVTKKTYEIWHRRHDYWLLAGIINHGYARWQDIQNDPRYAILNEPFKGEMNRGN
FLEIKNKFLARRFKLLEQALVIEEQLRRAAYLNMSEDPSHPSMALNTRFAEVECLAESHQ
HLSKESMAGNKPANAVLHKVLKQLEELLSDMKADVTRLPATIARIPPVAVRLQMSERNIL
SRLANRAPEPTPQQVAQQQ
NT seq
5820 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgggcctgggctccccgtccccctgctcagcgggcagtgaggatgaggatata
gatgcacttttgaacaacagtctgcccccaccccacccagaaaacgaagaggacccagaa
gaggatttgtcagaaacagagactccaaaactcaagaagaagaaaaagcctaagaaacct
cgggaccctaaaatccctaagagcaagcgccaaaaaaaggagcgtttgctcttatgccgg
cagctgggagacagctctggggaggggccggagtttgtggaggaggaggaagaggtggct
ctgcgctcagacagtgagggcagcgactatacccctggcaagaagaagaagaagaaactt
ggacctaagaaagaaaagaagagcaaatccaagcggaaggaggaggaggaggaggatgac
gatgacgatgattcaaaggagccaaaatcatctgctcagctcctggaagactggggcatg
gaagatattgaccacatgttctcagaagaggattatcgcatgctgaccaactacaaggcc
ttcagccagtttgtcagacccctcattgctgccaaaaaccccaagatcgccgtctccaag
atgatgatggtcttgggtgcgaagtggcgggagttcagcaccaacaatcccttcaaaggc
agttctggggcctcagtggcggcagcggcagcggcggcggtggcagtggtggagagcatg
gtgacagccactgaggttgcgcctcctcctccccccgtggaggtgcctgtccgcaaggcc
aagaccaaggaaggcaaaggtcccaatgctcggaggaagcccaagggcagccctcgtata
cctgatgccaagaagcctaaacccaagaaagtagctcccctgaaaatcaagctgggaggt
tttggttctaagcgtaagaggtcctcgagtgaggatgatgacttagatgtggaatctgac
ttcgatgatgccagtatcaatagctattctgtttctgatggttccaccagccgcagtagc
cgcagccgcaagaaactccgaaccactaaaaagaaaaagaaaggcgaggaggaggtgact
gctgtggatggttatgagacagaccaccaggactattgtgaggtgtgccagcaaggtggc
gagatcatcctgtgtgacacctgcccccgcgcttaccacatggtgtgcctggatcccgac
atggagaaggctcctgagggcaagtggagctgcccccattgcgagaaggaaggcatccag
tgggaggctaaagaggacaattcggagggtgaggagatcctggaagaggttgggggtgac
cctgaagaggaggatgaccaccacatggaattctgtcgggtctgcaaggatggtggggag
ctgctttgctgtgacacctgtccttcctcctaccacatccattgcctgaacccccctctt
ccagagatccccaatggcgaatggctctgtccccgctgtacgtgtccagctcttaagggc
aaagttcagaagatcctgatctggaagtggggtcagccaccatctcctaccccagtgcct
cggcctccagatgctgaccccaacactccctctcccaagcccttggaggggcggccagag
cggcagttctttgtgaaatggcaaggcatgtcttactggcactgctcctgggtgtctgaa
ctgcagctggagctgcactgtcaagtgatgttccgaaactatcagcggaagaatgatatg
gatgagccgccttcgggggactttggtggggacgaagagaagagccggaaacgaaagaac
aaagaccctaagtttgcagagatggaggaacgattctatcgctatgggataaagcctgag
tggatgatgatccaccgaattctcaaccacagcgtggacaagaagggccatgtccactat
ttgatcaagtggcgggacctgccctatgatcaggcctcctgggaaagtgaggatgtggag
atacaggactacgacctgttcaagcagagctattggaatcacagggagttaatgaggggt
gaggaaggccgaccaggcaagaagctcaagaaggtaaagctacggaagttggaaaggcct
cccgaaactccgacagttgatccgacagtgaagtatgagcgacagccagagtacctggat
gctactggtggaaccctgcatccctaccagatggagggcttgaattggttgcgcttctcc
tgggctcagggcaccgacaccatcttagctgatgagatgggcctggggaagactgtccag
acggcagtcttcctctactccctctataaagagggtcattccaagggccccttcctagtg
agtgctccgctttctaccatcatcaactgggagcgggagtttgaaatgtgggctccagat
atgtatgtggtgacctacgtgggtgacaaagacagccgtgccatcatccgagagaatgag
ttctcctttgaagacaacgccattcgtggtggcaagaaggcctctcgcatgaagaaagag
gcatctgtgaaatttcatgtgctgctgacatcctatgagttgatcaccattgacatggca
atcttgggttctattgactgggcctgcctcatcgtagatgaagcccatcggctcaagaat
aatcagtctaagttcttccgggtcttgaatggttactcactccagcacaaactgttgctg
actgggactccgttacaaaacaacctagaagagttgtttcatctgctcaactttcttacc
cctgagagattccacaatttggaaggcttcttggaggagtttgctgacattgccaaggag
gaccagattaaaaagctgcatgacatgctggggcctcacatgttgcgacggctcaaagct
gatgtgttcaagaacatgccatctaagacagagctgattgtgcgtgtggagctgagtcct
atgcagaagaaatactacaagtatatcctcactcgaaattttgaagcactcaatgctcga
ggtggtggcaaccaggtctctctgctaaatgtggtgatggatcttaaaaagtgctgcaac
cacccatatctcttccctgtggctgcaatggaagctcctaagatgcctaatggcatgtat
gatggcagtgccctaatcagagcatctgggaaattgttgctgctacagaagatgctcaag
aaccttaaggagggtgggcaccgcgtcctcatcttctcccagatgaccaagatgctggac
ctgctggaggatttcttagaacatgaaggttataagtacgaacgtattgacggtggaatc
actgggaacatgcgtcaagaggccattgaccgattcaatgcaccgggtgctcagcagttc
tgcttcttgctttccactcgtgctggaggccttggaatcaatctggccactgctgacaca
gttattatctacgactctgactggaatccccataatgacatccaggcctttagtagagct
caccgtatcgggcaaaataagaaggtgatgatttatcggtttgtgacccgtgcgtcagtg
gaggagcgcatcacgcaggtggcaaagaagaagatgatgctgacgcatctagtagttcgg
cctgggctgggctccaagactggatccatgtccaaacaggagcttgatgacatactcaaa
tttggcactgaggaactattcaaggatgaagccacagatggaggaggagacaacaaagag
ggagaagatagcagtgttatccattatgatgataaggccattgaacgactgctggaccgt
aaccaggatgagacggaagacacggaattgcagggcatgaatgaatatctgagctcattt
aaagtggcccagtatgtagtacgggaagaagaaatgggggaggaagaggaggtagaacgg
gaaatcataaaacaggaagaaagtgtggatcctgactattgggagaaattgctgcggcac
cattatgagcagcagcaagaagatctggcccgaaatctgggcaaaggaaaaagaatccgt
aaacaggtcaactacaatgatggctcccaggaggaccgaggtgtgtgtggccggccccac
cccccacccatcggccgttccactagagcagtgggccccgctcatctgccctctctccct
ccagattggcaggacgaccagtccgacaaccagtccgattattcagtggcctcagaggaa
ggtgatgaagactttgatgaacgttcagaagctccccgcaggcccagtcgtaagggcctg
cggaatgataaagataagccattgcctcctctgttggcccgagttggtgggaatattgaa
gtacttggctttaatgctcgtcagcgaaaagcctttcttaatgcaattatgagatatggg
atgccacctcaggatgcttttaccacccagtggcttgtgagagatctgcgaggcaaatca
gagaaagagttcaaggcttatgtctctctttttatgcggcatttatgtgagccaggagca
gatggggctgagacctttgctgatggtgtccctcgagaaggcctgtctcgccagcatgtc
cttactaggattggtgtcatgtccttgattcgcaagaaggtacaggagtttgaacatgtt
aatgggcgctggagcatgcctgaacttgctgaagtagaggaaaacaagaaaatgtcccag
ccagggtccccttcccccaagactcctacaccctccactccaggggacacgcaacccaat
actcctgcacctgccccacctgttgaagatgggataaaaatagaggaaaatagcctcaaa
gaagaagagagtgcagaaggagaaaaggaggttaaatctgtagcccctgaagccactgtt
gagtgtacacagacccctgctcctgcctcagaggatgaaaaagcccttgttgaacctcct
gagggagaggagaaagaaaaggctgaggtgaaggagagaacagaggaacctatggagaca
gagcccagaggtgttactgatgtggagaaggcggaggagaagtcagcagtagatttgacc
tccattgtggtggaggacaaagaagagaagaaagaagaagaagagaagaaagaggtgatg
cttcagaatggagagacccccaaagacctgaatgatgagaagcagaagaagaatattaaa
cagcgtttcatgttcaatatcgcagacggtggttttactgagttgcactccctttggcag
aatgaggagcgggcagccactgtcaccaagaagacttacgagatctggcatcgacggcat
gactactggctgctggctggcatcataaaccatggctatgcccggtggcaggacatccag
aatgacccacgctatgccatcctcaatgagcctttcaagggcgaaatgaaccgtggcaat
ttcttagagatcaagaataagtttctagctcgaaggttcaagctcttagaacaagccttg
gtgattgaggaacagctgcgccgggcagcttacctgaacatgtcagaggacccctctcac
ccttccatggccctaaacacccgctttgctgaggtggagtgtttggcggagagtcatcag
catctgtccaaggagtcaatggcaggaaacaagccagccaatgcggtcctgcacaaagtt
ctgaaacagctagaagaactgctgagtgacatgaaagccgatgtgactcgccttcctgct
accattgcccgaattcctccagttgctgtgaggctacagatgtcagagcgtaacattctc
agccgcctggcaaaccgagcacctgaaccgactccacagcaggtagcccagcagcagtga
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integrated database retrieval system
