Manis javanica (Malayan pangolin): 108388307
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Entry
108388307 CDS
T06054
Name
(RefSeq) antigen peptide transporter 2
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv02010
ABC transporters
mjv04145
Phagosome
mjv04612
Antigen processing and presentation
mjv05163
Human cytomegalovirus infection
mjv05168
Herpes simplex virus 1 infection
mjv05169
Epstein-Barr virus infection
mjv05170
Human immunodeficiency virus 1 infection
mjv05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108388307
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108388307
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
108388307
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
108388307
05168 Herpes simplex virus 1 infection
108388307
05163 Human cytomegalovirus infection
108388307
05169 Epstein-Barr virus infection
108388307
09163 Immune disease
05340 Primary immunodeficiency
108388307
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mjv02000
]
108388307
Enzymes [BR:
mjv01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
108388307
Transporters [BR:
mjv02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
108388307
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_30
AAA_21
AAA_16
AAA_29
AAA_23
AAA_25
AAA_15
AAA_33
Zeta_toxin
SRP54
APS_kinase
Motif
Other DBs
NCBI-GeneID:
108388307
NCBI-ProteinID:
XP_036861055
LinkDB
All DBs
Position
Unknown
AA seq
699 aa
AA seq
DB search
MRLLDLRPWASLLLVDLALLWLLQGTLGALLPRGLLGLWLEGTLRLGGLWWLLMLGGLLG
HVGTLLPLLCLGTPLFLSLRALVMGPLSAPPVRAASAPWSWLLVGYGAAGLSYAVWAMLS
PQERDQGQENSKALMWRLLKLSRPDLPFLSAAFFFLIVAVLGETFIPYYSGRVIDILGGD
FDPDAFGSAIFFMCLFSVGSSLSSGCRGSCFLITMSRINLRIRERLFSSLLRQDLGFFQE
TKTGELTSRLNSDTKLMSCWLPLNANVLLRSLVKVVGLYTFMLNLSPRLTLLSLLKLPLI
ISTEKVYSVRQQAVLLEIQDAVVKAGQVVQEAVGGLQTVRSFGAEEQEVCRYKEALEKHR
QLCWRRDLERALYVLLQRMLNLALQVLMLSCGLQQVLAGDLTRGGLLSFLLFQENVGSYV
CTLVYMCGDMLSNVGAAEKVFRYLDRQPNLPPPGTRAPPALQGLVEFQDVSFAYPSRPDQ
PVLKGLSFTLCPGQVTALVGPNGSGKSTVAALLQNLYQPTGGQLLLDGEPIAQYEHHYLH
RQVALVGQEPVLFSGSVRDNIAYGLKNCSDDKVMAAARAASAEEFINDMQHGLDTDVGEK
GNQLAVGQKQRLAIARALVRDPRVLILDEATSALDVQCEQALQDWKSRGDRTVLVIAHRL
QTVQSADQILVLRQGALLQHAQLLQGQDPYCRLVQQLQD
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgcggctcctggacctgagaccctgggcctccctgctgttggtggacctggccttactc
tggctgcttcagggcactctgggggctctgcttccccgagggcttctaggcctgtggctg
gaggggaccctgcgactgggagggctctggtggctgctaatgctgggagggcttctgggg
catgtgggaacactgctgcccctactctgcctggggacccccctgtttctgtccctgagg
gcactggtgatggggcccttgagtgctcccccagtcagagcagcttcagccccttggagc
tggctgctggtggggtatggggctgcagggctcagctatgcagtgtgggccatgctgagc
ccccaagagagggaccagggccaggagaacagcaaagccttgatgtggaggctgctgaag
ctctccaggccagacctgcctttcctctctgccgccttcttcttcctcatagttgctgtg
ttgggtgagacgtttatcccttactattctggtcgtgtgattgacattctgggaggtgat
tttgaccccgacgccttcggcagtgccatctttttcatgtgtctcttttccgttgggagc
tcactgtcttcaggctgtcgaggaagctgctttctcataaccatgtccagaatcaacctg
cgcatccgggagcgacttttctcctccctgctgcgccaggacctcggtttcttccaggag
actaagacaggggagctgacttcaaggctgaattcggataccaaactaatgagttgctgg
cttcctttgaatgccaacgtgctgttgcgaagcctggtgaaagtggtgggactgtatacc
ttcatgctcaacctgtcacctcgactcaccctcctttccctgctcaagttgcctcttata
atatccactgagaaagtgtacagtgtccgccagcaggcagtgcttctggagatccaggat
gcagtggtgaaagcagggcaggtggtgcaggaggcagttggagggctgcagactgtgcgt
agctttggggccgaggagcaagaggtctgtcgctataaagaggctcttgaaaaacaccgg
cagctgtgctggcgtcgagacctggaacgtgccctttacgtactcctacagaggatgctg
aacttggcgctgcaggtgctgatgctgagctgcggattgcagcaggtcctggccggggac
ctcacccgcggtggactgctctccttcctgctcttccaggagaacgtgggctcctacgtg
tgtaccctggtatacatgtgtggggatatgctgagcaatgtgggggctgctgaaaaggtc
tttcgctacctggaccgacagccaaacctgcctccacccggaacccgggcccctcccgcc
ctgcaggggcttgtggagttccaggatgtctcctttgcatatcccagtcgtcctgaccag
cctgtgctcaaggggctgtcgttcaccctgtgtccgggtcaggtgactgcactggtggga
cccaatgggtctgggaagagcacagtggctgccctgctgcagaatctgtaccagcccacc
ggggggcagctgttgctcgacggggagcccatcgcccagtacgaacaccactacctgcac
cgacaggtggccctggtcgggcaggagcctgtgctgttttcgggttctgtgagggacaac
atcgcttacgggctgaagaactgcagtgatgacaaggtgatggctgccgcccgggctgcc
agcgctgaggagtttatcaacgacatgcagcatggcctggatacagatgtaggggagaaa
gggaaccagctggctgtgggacagaaacaacggctggccattgcccgggccctcgtgagg
gacccgcgcgtcctcatactggatgaagccaccagcgccctggacgtgcagtgcgagcaa
gcgctgcaggactggaaatcccgcggggaccgcacagtgctggtgatcgctcacaggctg
caaaccgttcagagcgctgaccagatcctggtgctccggcagggggcgctgctgcagcac
gcccagctcctgcaggggcaggacccctattgccgcctggtgcagcagctgcaggactga
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