Manis javanica (Malayan pangolin): 108388499
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Entry
108388499 CDS
T06054
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv03015
mRNA surveillance pathway
mjv05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108388499 (HBS1L)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
108388499 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mjv03019
]
108388499 (HBS1L)
Messenger RNA biogenesis [BR:
mjv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
108388499 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
AAA_29
Sfi1_C
Motif
Other DBs
NCBI-GeneID:
108388499
NCBI-ProteinID:
XP_017502482
LinkDB
All DBs
Position
Unknown
AA seq
685 aa
AA seq
DB search
MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKPSVVEPAEGYDYE
DQKDSSSSLLNHQLSGIDQARLYSCLDHMREVLGDAVPDDILIEAVLKNKFDVQKALSVV
LEQDKTQNLKVKKEGAMSKGKTAKGKSESQVSRSESDIVPKVAKMTVSGKKQTMGFEVPG
VTAEENGHSFHTPQKGIPSEDTSIAASDILEAVSKSVLPSHTIQASEEQSSIPTPVKKSS
KLKQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNVNKRTMHKYEQES
KKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGA
AQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQ
EITGKLGHFLKQAGFKESDVAFIPTSGLSGENLITRSQSNELTKWYKGLCLLEQIDSFKP
PQRSIDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQSGDRLLAIPPNETCTAKGITLHDE
PVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKEPIKACTRFRARILIFNIEVPITKGFP
VLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKLLSKGQNALVELQTQRPVALELYKDF
KELGRFMLRYSGSTIAAGVVTEIKE
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcatcggaatgtccgaggctataactacgatgaagattttgaagatgatgat
ctctatggccagtctgtagaggatgattactgtatttcgccatcaacagctgctcagttt
atttactcacgacgggacaagccttcagttgttgaacctgcagaaggatatgattatgaa
gatcagaaagactcctccagttctcttttgaaccatcagctaagtggaattgatcaagct
cgtctttattcatgccttgatcacatgagagaggtacttggagatgctgtgccagatgat
attttgattgaagcagttctgaagaacaagtttgatgtgcagaaggctttgtcagtggtt
ctggagcaagataaaacacagaatttgaaggtcaagaaggagggagcaatgtctaaagga
aagacagcaaaaggaaaatcagagtcccaggtgtcccgaagtgaatctgacattgtgcca
aaagttgcaaaaatgactgtgtctggaaagaagcaaactatgggatttgaagtgcctgga
gtaactgctgaagaaaatggtcatagtttccacacacctcaaaaaggaattcctagtgaa
gataccagcattgctgcttctgatattcttgaggctgtttctaaatcggttcttccgtcc
cacaccattcaagcatcagaagaacagagttcaataccaacaccagtgaaaaagtccagc
aagctgaagcagcagatagacgtcaaagcggaactggagaagcggcaaggagggaagcag
ctcctcaacttagtggtcattggtcatgtcgatgctgggaaaagtactctgatgggccat
atgctttatcttctgggtaatgtaaacaaaagaactatgcataagtatgaacaagagtct
aaaaaggctggcaaagcttcgtttgcatatgcatgggtcttggatgagactggagaagaa
agggaaaggggagtgacaatggatgttggtatgacaaagtttgagaccacaaccaaagtt
attacattaatggatgccccaggccataaggatttcattccaaatatgattacaggagca
gcccaggcggatgtagctgttttagttgtggatgccagcaggggggagtttgaagctggc
tttgaaactgggggccaaactcgggaacatggcctcttggttcgctctctcggagtgacg
cagcttgcagttgcagtcaataaaatggatcaggttaattggcaacaagaaaggtttcaa
gagattactggaaaacttgggcactttcttaagcaagcaggttttaaggaaagtgatgta
gcttttatccctaccagtggcctcagtggtgaaaatctaatcacaagatctcaatcaaat
gaactgacaaaatggtataaaggactatgtttattagaacaaattgattccttcaagccc
cctcaaagatctattgataagccttttagattatgtgtatctgatgttttcaaagatcaa
ggatctggattttgtgtaactggcaaaattgaagctggttatatccagtctggtgaccga
ctactagcaatacctcctaacgaaacttgtactgcaaaaggaatcactctgcacgatgaa
cctgttgattgggcagcggcaggcgatcatgttagtcttacgttggttgggatggatatc
atcaaaatcaatgttggctgcatattctgtggtcccaaagaacccattaaagcttgcact
cgtttcagagcccgaatcctcatctttaatattgaagttcctatcactaaaggatttcct
gtgctgttacactaccaaactgtcagtgaacctgctgttattaaacgattgattagcgtc
ttaaacaaaagtaccggtgaagtcacgaagaagaagcctaaattgctgagcaaaggccag
aatgctttggtagagctacagacacaaagaccagtcgcacttgagctgtataaagacttt
aaagagctggggagattcatgctgcgttacagtggttccacgatagctgctggtgtagtc
actgagattaaagaatga
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