KEGG   Manis javanica (Malayan pangolin): 108388647
Entry
108388647         CDS       T06054                                 
Symbol
DDB2
Name
(RefSeq) LOW QUALITY PROTEIN: DNA damage-binding protein 2
  KO
K10140  DNA damage-binding protein 2
Organism
mjv  Manis javanica (Malayan pangolin)
Pathway
mjv03420  Nucleotide excision repair
mjv04115  p53 signaling pathway
mjv04120  Ubiquitin mediated proteolysis
mjv05161  Hepatitis B
mjv05169  Epstein-Barr virus infection
mjv05200  Pathways in cancer
mjv05202  Transcriptional misregulation in cancer
mjv05210  Colorectal cancer
mjv05212  Pancreatic cancer
mjv05213  Endometrial cancer
mjv05214  Glioma
mjv05216  Thyroid cancer
mjv05217  Basal cell carcinoma
mjv05218  Melanoma
mjv05220  Chronic myeloid leukemia
mjv05222  Small cell lung cancer
mjv05223  Non-small cell lung cancer
mjv05224  Breast cancer
mjv05225  Hepatocellular carcinoma
mjv05226  Gastric cancer
Brite
KEGG Orthology (KO) [BR:mjv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108388647 (DDB2)
  09124 Replication and repair
   03420 Nucleotide excision repair
    108388647 (DDB2)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    108388647 (DDB2)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    108388647 (DDB2)
   05202 Transcriptional misregulation in cancer
    108388647 (DDB2)
  09162 Cancer: specific types
   05210 Colorectal cancer
    108388647 (DDB2)
   05212 Pancreatic cancer
    108388647 (DDB2)
   05225 Hepatocellular carcinoma
    108388647 (DDB2)
   05226 Gastric cancer
    108388647 (DDB2)
   05214 Glioma
    108388647 (DDB2)
   05216 Thyroid cancer
    108388647 (DDB2)
   05220 Chronic myeloid leukemia
    108388647 (DDB2)
   05217 Basal cell carcinoma
    108388647 (DDB2)
   05218 Melanoma
    108388647 (DDB2)
   05213 Endometrial cancer
    108388647 (DDB2)
   05224 Breast cancer
    108388647 (DDB2)
   05222 Small cell lung cancer
    108388647 (DDB2)
   05223 Non-small cell lung cancer
    108388647 (DDB2)
  09172 Infectious disease: viral
   05161 Hepatitis B
    108388647 (DDB2)
   05169 Epstein-Barr virus infection
    108388647 (DDB2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mjv04121]
    108388647 (DDB2)
   03400 DNA repair and recombination proteins [BR:mjv03400]
    108388647 (DDB2)
Ubiquitin system [BR:mjv04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     108388647 (DDB2)
DNA repair and recombination proteins [BR:mjv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      108388647 (DDB2)
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_THOC3 WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR5 Beta-prop_Aladin Beta-prop_WDR3_1st Beta-prop_WDR90_POC16_2nd WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_TEP1_2nd Beta-prop_WDR19_1st WDR55 Beta-prop_CAF1B_HIR1 DSE1_N Beta-prop_TEP1_C EIF3I WD40_RFWD3 Beta-prop_WDR3_2nd
Other DBs
NCBI-GeneID: 108388647
NCBI-ProteinID: XP_073072644
LinkDB
Position
11:66929806..66952580
AA seq 450 aa
MAPRKRPETQRTSXLRTRNRKSRSPVELDCEAKKMCLLCLGGSSRRFDSGCLWAGLASXC
RPCFRALHHHKLGKAAWPSIQQGLQKSFLRSLASYWIFQKAAPFDRRATSLAWHPAHPST
LAVGSKGGDIMLWNFCIKDKPIFIKGIGAGGSITGLKSNPLNTNLFFTSSMEGTTXLQDY
XGNTIRVFASSGTCNFWFCSLDVSARSQVLVTRDSVGHVTLLNMDGREVCSLEPRPFHPF
PYPQPWFCTPPELNPSLQFWNLRMHKKKVTHMALNPCCDWLLATAPVDQTVKIWDLRQVR
GKSSFLHSLPHGHPVNAAYFSPDGTQLLTTDHKSXVXVYSASXWDCPPSLIPHPHRHFQH
PSRQPGHRYNLIVGRYPDLNFKSGTSHELRTIDVFDGSSGKMMYXLYDPESSGIISLNEF
NSMGDMLALVSLLLGYHILIWSQEEAGMWK
NT seq 1344 nt   +upstreamnt  +downstreamnt
atggctcccaggaaacgcccagaaacccagaggacctgactgcgcaccaggaacaggaag
agcagaagccccgtggagctggactgcgaggccaagaagatgtgtctgttatgcttgggg
ggttctagcagaaggtttgactcaggctgcctttgggcagggctggctagctgcaggccc
tgcttcagggccctccaccaccataagctgggcaaagctgcctggccatcaatacagcag
ggtctccagaagtcctttttgcgctctctggcttcttactggatattccaaaaggctgcc
ccctttgacaggagggccacatccttggcatggcacccagctcaccccagcaccctggct
gtgggctccaaagggggagatatcatgctctggaacttctgcataaaagacaaacccatc
ttcattaaagggattggagctggagggagcatcactgggctgaagtctaaccctctcaat
accaacctgttcttcacctcctcaatggagggaacaacttagctgcaggactaaggcaat
actatccgagtttttgccagctcaggcacctgcaacttctggttttgcagcctggatgtg
tcagccagaagccaagtgctggtcaccagagacagtgtaggccatgtgaccctgctgaac
atggatggcagggaggtgtgttctctggagcccaggcccttccatcccttcccttacccc
cagccttggttctgcaccccacctgaattgaacccttctctgcagttttggaatctaagg
atgcacaagaagaaagtgacgcacatggccctgaacccatgctgtgattggctcctggcc
acagcccctgtagatcaaacagtgaaaatatgggacctgcgccaggttagaggaaaatcc
agcttcctccactcactgccacatggtcatcctgtcaatgcagcttacttcagtcctgat
ggaacccagcttctgaccactgaccataagagttaggtttgagtttactctgcctcctaa
tgggactgccctccaagcctgatcccgcaccctcaccgacacttccagcacccatcaagg
caacctggccatcggtacaacctcattgtgggccgatacccagatcttaatttcaaaagt
ggtacatcccatgaattaaggacaatcgatgtgtttgatggaagctcagggaagatgatg
tattagctctatgacccagaatcttctggtatcatttcactcaatgaattcaattccatg
ggggacatgctggcactggtctcactcctcctaggttatcacattctcatttggagccag
gaagaagctgggatgtggaaatga

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