Manis javanica (Malayan pangolin): 108389954
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Entry
108389954 CDS
T06054
Symbol
COPB2
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
mjv
Manis javanica (Malayan pangolin)
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mjv04131
]
108389954 (COPB2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mjv04147
]
108389954 (COPB2)
Membrane trafficking [BR:
mjv04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
108389954 (COPB2)
Exosome [BR:
mjv04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
108389954 (COPB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_WDR75_1st
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_SCAP
PEP5_VPS11_N
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
Helicase_dom4_arc
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
108389954
NCBI-ProteinID:
XP_017503965
LinkDB
All DBs
Position
Unknown
AA seq
906 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD
MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG
REEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSVVKIFKNFKE
KKSFKPDFGAESIYGGFLLGVRSVNGLAFYDWDNTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILKYLTEKVLAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALTVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNASMVNKLAEGAE
RDGKNNVAFMSYFLQGKLDACLELLIRTGRLPEAAFLARTYLPSQVSRVVKLWRENLSKV
NQKAAESLADPTEYENLFPGLKEAFVVEEWVKETHADLWPAKQYPLVTPNEERNVMEEAK
GFQPSRSAAQQELDEKPDSAYQLIMASHTANKEEKSLLELEVDLDNLELEDIDTTDINLD
EDILDD
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgcgactggatatcaagagaaagctaactgctcgatctgatcgagttaagagt
gtggatttgcatcctacagagccatggatgttggcaagtctttacaatggcagtgtgtgt
gtttggaatcatgaaacacagacactggtgaaaacatttgaagtgtgtgatcttcctgtt
cgagctgcaaagtttgttgcaagaaagaattgggttgtaacaggagcggatgatatgcag
attagagtgttcaattacaatactctggagagagttcatatgtttgaagcacactcagac
tacattcgctgtattgctgttcatccaacccagcctttcattctaacgagcagtgatgat
atgcttattaaactctgggactgggataaaaaatggtcttgctcacaagtgtttgaagga
cacacccattatgttatgcagatcgtgatcaaccccaaagataacaatcagtttgccagc
gcatctctggacaggaccatcaaggtgtggcagctgggctcctcctccccaaacttcact
ctggagggacatgagaaaggtgtgaattgcattgactactacagtggtggcgacaaacca
tacctcatttcaggtgcagacgaccgtcttgttaaaatatgggactatcagaacaaaaca
tgtgtacagacactggagggacatgcacaaaatgtgtcttgtgccagttttcatcctgag
ttgccaattatcatcacaggttcagaagatggaacggtgcgtatttggcattcaagtacc
tatcgccttgagagtacactgaattatggaatggagagggtgtggtgtgtagctagtctg
agagggtccaacaatgttgctttgggctacgatgaagggagcatcattgttaagcttggt
cgggaggaacctgccatgtccatggatgccaatgggaagataatttgggccaagcattca
gaagtccagcaggccaacctgaaagcaatgggagatgctgaaattaaagatggagaaaga
ttgccactggcagtaaaggatatgggcagttgtgaaatataccctcagactattcagcac
aatcctaatgggcggtttgttgtggtgtgtggtgatggcgagtatatcatctacacagca
atggcattgagaaacaagagctttgggtctgcccaggagtttgcatgggcccacgattct
tcagaatatgcaataagagagagcaacagtgttgtaaagatatttaagaactttaaggaa
aaaaagtcatttaaaccagactttggagctgaaagtatatatggaggcttcctcttggga
gtgagatctgtaaatggtttagctttctatgactgggacaatacagaacttatacgcaga
attgaaattcagcccaaacacattttctggtctgactctggagagctagtctgtattgcc
actgaagagtcattttttatccttaagtatctgacagaaaaagtcttggctgcacaggaa
acacatgagggagttactgaagacggcattgaagatgcctttgaggttcttggtgagatt
caggaaattgtgaaaacagggctgtgggtaggcgattgcttcatttacacaagttctgtg
aacagattaaattactatgttggaggagaaatagtcaccattgcccacttggacaggaca
atgtatctactgggctacattcctaaagacaacaggctttatcttggggataaagaactc
aacatcgttagctactccctactggtttcagtactggaataccagacagctgtcatgcga
agggactttggcatggctgataaagtccttcctaccattccaaaagagcagaggaccaga
gttgcacactttttggaaaagcagggctttaagcagcaagctcttacagtatccacagat
cctgagcatcgctttgaacttgcacttcagcttggagaactaaaaattgcataccaatta
gcagtggaagcagagtcagaacagaaatggaaacaacttgccgaacttgccatcagtaaa
tgtcagttcggcctcgcgcaggagtgcctgcaccacgcccaggactacggcggtctgttg
cttctggccaccgcttctggaaatgctagtatggtgaacaaactagcagagggagcagag
agagatggcaagaataacgtggccttcatgagctactttttacagggcaagcttgatgct
tgcctggagctcttgattaggactgggcgactgccagaagctgctttcctggcccggact
tacttacccagtcaggtttctagggtggtgaaactctggagagaaaatctctcaaaagtc
aatcagaaagcagcagagtcccttgctgatccaacagagtatgaaaaccttttccctgga
ttaaaagaagcctttgttgtggaagaatgggtgaaggagacacatgctgacctgtggcca
gccaaacaatacccacttgtcacgccaaatgaagaaagaaatgttatggaagaggcaaaa
ggcttccagccctcaagatctgcagctcagcaggaacttgatgagaaacctgattctgct
tatcaacttatcatggcctcccacacagccaacaaagaagaaaagagtttacttgaactg
gaagttgatttggataatttggaactagaagatattgacacaacagatatcaacctagat
gaagatattttagatgactga
DBGET
integrated database retrieval system
