Manis javanica (Malayan pangolin): 108390023
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Entry
108390023 CDS
T06054
Symbol
IGHMBP2
Name
(RefSeq) DNA-binding protein SMUBP-2 isoform X3
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
mjv
Manis javanica (Malayan pangolin)
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mjv03009
]
108390023 (IGHMBP2)
03012 Translation factors [BR:
mjv03012
]
108390023 (IGHMBP2)
Enzymes [BR:
mjv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
108390023 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
108390023 (IGHMBP2)
Ribosome biogenesis [BR:
mjv03009
]
Eukaryotic type
Other ribosome biogenesis factors
108390023 (IGHMBP2)
Translation factors [BR:
mjv03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
108390023 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
R3H
AAA_30
AAA_19
SMUBP-2_HCS1_1B
zf-AN1
Viral_helicase1
ResIII
AAA_16
DEAD
nSTAND3
AAA_22
UvrD-helicase
SLFN-g3_helicase
Helicase_RecD
IstB_IS21
Flavi_DEAD
AAA_25
VWA_2
DnaB_C
AAA
PhoH
Zot
ABC_tran
NTPase_1
Herpes_ori_bp
NPHP3_N
Med28
DAP3
ATPase
UvrD_C_2
CbiA
AAA_6
AAA_31
Motif
Other DBs
NCBI-GeneID:
108390023
NCBI-ProteinID:
XP_017504092
LinkDB
All DBs
Position
Unknown
AA seq
915 aa
AA seq
DB search
MLQVLKPKPNWPGKACSRGGWRPACGLTGGDIVGLYDAGAQLATGILTRITQKSVTVAFD
ESHDFQLSLDRDTSYRLLKLANDITYKRLKKALTALRRHHCGPAATLIEVLFGGAAPSPA
CEIHSPVFYNTSLDDSQKAAVSFALAQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKVL
CCAPSNIAVDNLVERLAQGTLRILRLGHPARLLESIQQHSLDAVLARSDSAQIVTDIRRD
IDQVFMKTRKIQDKREKSNFRNEIKLLRKELKEREEAALLESLRAADVVLATNAGASSDG
PLKLLPDSHFDVVVIDECAQALEASCWIPLLRARKCILAGDHKQLPPTTVSHKAALAGLS
LSLMERLAKECGEGVVQTLTVQYRMHRAIMQWASEALYHGRLTAHPSVAGHLLRDLPGVA
ATGETGLPLLLVDTAGCGLFELEEEDDQSKGNPGEVRLVSLHVRALVDAGVRAGDIAVIT
PYNLQVDLLRQSLAHTYPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINV
AITRARRHVAVICDTRTANSHAFLRTLVGYFSEHGEVRTAFEYLDDIVPDNYSHESSQGH
SQAGTKHPGSAASARRPPGSRPPEGAQKARAAAQLERKTPGRKPLGSEAGSQPTLSGSSP
GGAESREYADRFRAEIVEFVASEKMQLEFPPSLNSCDRLWVHRIAEELGLRHDSAGEGRE
RFITLSKRAPGPTQAERPPGEQGGRAPPHLKALHPERPQGETGRQGRQAKERPQASGPGP
RKLPGKKKKKEAKGHVATGLPLEGDFDALVSAAIEADHTCGFTKCTASVTTLGQFCPHCS
RRYCLSHHLPEVHGCGERARAHARQRISREGVLYAGSGTKDRSLDPARRAQLQRRLDRKL
DELTSQRRGRRGEES
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaggtgttgaaacccaagccaaactggccgggcaaggcttgcagcaggggtggc
tggaggccagcttgcgggctcacgggaggtgatatagtgggtctgtatgatgcaggcgct
cagctggccactgggatcctgacccggatcacccagaagtcagtcacggtggcctttgac
gagtcccatgacttccagctgagcttggaccgagacacttcctacagactcttaaaactt
gccaatgacatcacttataagcggctgaaaaaagctctgaccgccctgcggaggcatcac
tgcggccctgcggccacgctcatcgaggtcctttttggtggagcggcccccagtcctgcc
tgtgaaatacactcgcccgtgttctataacacctccctggacgactcccagaaggcagcg
gtctcgtttgcactggcccagaaagaacttgccatcatccatgggcctcctggcactggg
aaaaccaccacagtggttgaaatcattcttcaagctgtgaagcagggcctgaaggttctg
tgctgtgcgccctctaacatcgccgtggataacctggtcgagcgtctggctcagggcacg
ctgaggatcctacgccttggccaccctgcccgactgctggagtccattcagcagcattcc
ctcgatgcggtcttggcgcggagtgacagcgcccagattgtcacagacatcagaagggac
atcgatcaggtgtttatgaaaaccagaaagatccaggataagagggagaaaagtaatttt
cgaaatgaaatcaagctgttaagaaaagagctgaaggagagggaagaagccgcccttctg
gagagccttcgggccgcggacgtggtcctggcgacgaacgcaggtgcttcttctgacggc
cctctgaagttgctccctgacagccacttcgatgtggtggtcatcgacgagtgtgcccag
gccctcgaagctagctgctggatccccctgctgagggcccgaaagtgcatcctggctgga
gatcacaaacagctgccccccaccacagtctctcacaaggctgcgctggccgggctgtcg
ctcagcctgatggagcgcctggccaaggagtgcggtgagggggtggtgcagacgctgacc
gtgcagtaccgcatgcacagggccatcatgcagtgggcttcagaggccctgtaccacggg
cggctcaccgcacacccttccgtggctgggcacctcctgcgggatctcccaggagtggct
gccacgggggagacgggcctgcccctgctgctcgtggacacggccggttgtgggctgttt
gaacttgaagaggaggacgaccagtctaaagggaaccctggtgaggtgcgcctcgtcagc
ctgcacgtccgggctctggtggacgctggagtccgagccggcgacatcgccgtcatcacg
ccgtacaacctgcaggtggacctgctcaggcagagcctcgcccacacataccctgagctg
gagattaagtcggtcgatggtttccaaggccgagagaaggaggctgtgatactgtccttc
gtcagatccaataggaaaggtgaggttggtttccttgctgaggaccggcggatcaacgtc
gccatcacccgtgcccggcgccacgtggcagtcatctgcgatactcgcactgccaacagc
catgccttcttgaggaccctggtgggttacttctcggagcacggggaagtgcgcacggcc
tttgagtatcttgatgacattgtccccgataactattcccatgagagctcccagggccac
agccaagcaggcacgaagcacccaggctctgctgcgtcggccaggaggcctcccggaagc
aggccccctgaaggagcccagaaggccagagccgctgcccagctggagcggaagacgcca
ggcaggaagcctttgggctctgaggcgggttcacagccgaccctcagtggcagcagccca
gggggagcggagagcagggagtatgcagaccgtttcagggctgagatagtggagttcgtg
gcaagcgagaaaatgcagttggagtttcctccttccctgaactcctgcgacaggctgtgg
gtccaccggatagcggaagagctcgggctgaggcatgacagcgccggagaggggagggag
aggttcataaccctgagcaagagggcccccggccccacccaggcggagcgcccccctggg
gagcagggaggccgggccccaccgcatctgaaggctctgcatcccgagaggccgcagggg
gagacgggcagacaggggcggcaggccaaggagcggccacaggcctcgggccccgggccg
cggaagttaccaggaaagaaaaagaagaaagaagcaaaaggacacgtcgccacaggtctg
cccctcgagggggacttcgatgccctggtctcggctgccattgaggctgatcatacctgt
ggctttactaagtgcacagccagcgtcacgaccctgggccagttctgcccacactgcagc
cggcggtactgcctcagccaccacctgccggaggtccacggctgcggggagagggctcgc
gcccatgcccggcagaggatcagccgggaaggagtcctctacgctggcagtggtaccaag
gaccggtccctggacccagccaggcgggcccagctccagaggaggctggacaggaagctg
gatgagctgaccagccagaggaggggcaggaggggagaggagagttaa
DBGET
integrated database retrieval system
