Manis javanica (Malayan pangolin): 108390126
Help
Entry
108390126 CDS
T06054
Symbol
CDK5RAP1
Name
(RefSeq) mitochondrial tRNA methylthiotransferase CDK5RAP1 isoform X1
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
mjv
Manis javanica (Malayan pangolin)
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mjv03016
]
108390126 (CDK5RAP1)
Enzymes [BR:
mjv01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
108390126 (CDK5RAP1)
Transfer RNA biogenesis [BR:
mjv03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
108390126 (CDK5RAP1)
Prokaryotic type
Methylthiotransferases
108390126 (CDK5RAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
LIAS_N
MAT1-1-2
Motif
Other DBs
NCBI-GeneID:
108390126
NCBI-ProteinID:
XP_017504316
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MHPLRCVLRAQGCLRLGPLASGSQLQLRTCRAHSSHHSTASLSSERQQENEVRKDFTSKL
DTGPTFQDFLRSASAPQEKPSSPDVEDPPPYLTADELLGRQRKVYLETYGCQMNVNDTEI
AWSILQKSGYLRTSNLQEADVILLVTCSIREKAEQTIWNRLHHLKALKAKRLRSRVPLKI
GILGCMAERLKEEILDREKMVDILAGPDAYRDLPRLLAVVESGQQAVNVLLSLDETYADV
MPIQTSPSATCAFVSIMRGCDNMCSYCIVPFTRGRERSRPVASILEEVRKLSEQGLKEVT
LLGQNVNSFWDNSEIQFSNITSTHLSRGFSTNYKTKQGGLRFAHLLDEVSRVNPEMRIRF
TSPHPKDFPDEVLQLIHERDNICKQIHLPAQSGSSRVLEAMRRGYSREAYVELIHHIRES
IPGVSLSSDFIAGFCGETEEDHLQTVSLLREVQYNTGFLFAYSMRQKTRAYHRLKDDVQE
EVKLRRLEELITVFREEATKANKTSVGRTQLVLVEGLSKRSAADLCGRNDGNLKVIFPDV
EMEDVTNSELKVRAQPGDYVLVKITSASSQTLKGHVLCRTTLKDSAAYCRPDSAGPH
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgcatcctttacggtgtgtgctccgggcacaggggtgtctgaggttggggcccttggcc
tctgggtcccagctgcagctcaggacctgcagggcacatagcagtcatcacagcaccgca
agtctcagttcagaaaggcagcaggaaaatgaagttcggaaagatttcacctccaagctg
gacacagggccgacttttcaggattttttaaggagtgcttcagctcctcaagagaaacca
tcttctccggatgtggaggacccacccccctatctcacagcggatgaacttttaggaagg
cagagaaaagtctaccttgagacatatggctgccagatgaatgtgaatgacacggagata
gcctggtccatcttacagaagagtggctacctgcggaccagtaacctccaagaggctgat
gtgatcctccttgtgacgtgttctatcagggagaaagctgaacagaccatctggaatcgt
ttacatcaccttaaagctctgaaggcaaaacggctccgttcccgagtgcctctgaagatt
gggattctaggctgcatggctgagagattgaaggaggagatcctcgacagggagaaaatg
gtggatattttggctggtccagatgcctatcgagacctgccacggctgctggctgttgtt
gagtcaggccagcaagctgtgaatgtgctgctgtctctggatgagacctacgcagatgtc
atgccaatccagacaagtcccagtgctacctgtgccttcgtgtctatcatgcgaggctgt
gacaacatgtgcagctactgcatagttcctttcacacgtggccgggagaggagtcggcct
gttgcctccattctagaggaagtgaggaagctttctgagcaggggctgaaagaagtgaca
ctccttggtcagaatgttaatagtttttgggacaattcggagatccagttcagcaatata
acgtctacccacctcagtcgtggtttctccaccaactataaaaccaagcaagggggcctt
cgttttgctcaccttctagatgaggtctccagagtcaatcctgaaatgaggatccgtttt
acctctccccaccccaaggactttcccgatgaggttctgcagctgattcatgagagagac
aacatctgtaaacagatacatctaccagctcagagtggaagcagccgtgtactggaggct
atgcggaggggatactcaagagaagcttatgtggaattaattcatcatatcagagagtct
attcctggtgtgagcctcagcagtgatttcattgctggcttttgtggtgaaacagaagaa
gatcatctccagacggtgtctttgcttcgggaagttcagtacaacacaggcttcctcttt
gcctacagcatgagacagaagacacgagcatatcacaggctgaaagatgatgtccaggaa
gaggtaaaattaaggcgtttggaggaacttatcactgtcttccgagaagaagcaacaaaa
gccaacaagacctctgtgggtcgtacccagctggtgctggtggaggggctcagtaaacgc
tctgctgctgacctctgtggccggaatgatggaaaccttaaggtgattttccctgatgta
gagatggaggatgtcactaactctgagctcaaggtgagagctcagcctggggactatgtg
ctggtgaagatcacttccgccagctctcagacacttaaaggacatgtcctctgcaggacc
acactgaaggactccgcagcgtattgccgacctgactctgcaggaccacactga
DBGET
integrated database retrieval system
