KEGG   Manis javanica (Malayan pangolin): 108390169
Entry
108390169         CDS       T06054                                 
Symbol
RAE1
Name
(RefSeq) mRNA export factor isoform X1
  KO
K14298  mRNA export factor
Organism
mjv  Manis javanica (Malayan pangolin)
Pathway
mjv03013  Nucleocytoplasmic transport
mjv05014  Amyotrophic lateral sclerosis
mjv05164  Influenza A
Brite
KEGG Orthology (KO) [BR:mjv00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    108390169 (RAE1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    108390169 (RAE1)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    108390169 (RAE1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mjv03019]
    108390169 (RAE1)
   03036 Chromosome and associated proteins [BR:mjv03036]
    108390169 (RAE1)
Messenger RNA biogenesis [BR:mjv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     108390169 (RAE1)
Chromosome and associated proteins [BR:mjv03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    108390169 (RAE1)
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40 WDR55 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_Nup120_160 WDR90_beta-prop_4th Beta-prop_SPT8
Other DBs
NCBI-GeneID: 108390169
NCBI-ProteinID: XP_017504389
LinkDB
Position
Unknown
AA seq 367 aa
MSLFGTTSGFGTSGTMFGSTTTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGS
WANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQAI
QIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYP
MAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVA
IHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWD
KDARTKLKTSEQLDQPIAACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAEE
LKPRNKK
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgagtctatttggaacaacctcgggttttggaaccagtgggaccatgtttggaagcaca
accacagataaccacaaccctatgaaggatattgaagtaacatcttctcctgatgatagc
attggttgtctatctttcagcccaccaaccttgccaggaaactttcttattgcaggatca
tgggctaacgatgttcgctgctgggaagttcaagatagtggacagactattccaaaagcc
cagcagatgcacacagggcctgtgctagatgtctgctggagtgatgatgggagcaaagta
tttacagcttcatgtgataaaactgccaaaatgtgggacctcaacagtaaccaagcaata
cagatcgcacagcacgatgctcctgttaaaaccatacattggatcaaagcaccaaactac
agctgtgtgatgaccgggagctgggataagacattgaagttttgggatacgcgatcgtcg
aatcctatgatggttttacagctccctgaaaggtgttactgtgccgatgtgatctatcct
atggctgtggtggcaactgcggagaggggactaattgtctaccaattggagaatcaacct
tctgagttcaggaggatagaatctccactgaaacaccagcatcgatgtgtggctattttt
aaagacaaacagaacaagccgactggttttgccttgggaagtattgaggggagagttgcc
attcactacatcaaccccccaaatcctgccaaagataacttcacctttaaatgccatcgc
tctaacggtaccaatacttcagcgcctcaggacatctatgcggtaaatggaattgcattc
catcctgtacatggcacccttgcaactgtgggatctgatggtcgattcagcttttgggac
aaagatgcccgaacaaaactaaaaacttcagaacagttagatcaaccgatagcggcttgc
tgcttcaatcacaatggaaacatatttgcgtatgcttccagctacgactggtcaaaggga
catgaattttataatccccaaaagaaaaattacattttcctgcgtaatgcagccgaagag
ctaaaacccaggaataagaagtaa

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