Manis javanica (Malayan pangolin): 108391617
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Entry
108391617 CDS
T06054
Symbol
COL4A1
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv04151
PI3K-Akt signaling pathway
mjv04382
Cornified envelope formation
mjv04510
Focal adhesion
mjv04512
ECM-receptor interaction
mjv04518
Integrin signaling
mjv04820
Cytoskeleton in muscle cells
mjv04926
Relaxin signaling pathway
mjv04933
AGE-RAGE signaling pathway in diabetic complications
mjv04974
Protein digestion and absorption
mjv05146
Amoebiasis
mjv05165
Human papillomavirus infection
mjv05200
Pathways in cancer
mjv05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
108391617 (COL4A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108391617 (COL4A1)
04518 Integrin signaling
108391617 (COL4A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108391617 (COL4A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
108391617 (COL4A1)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
108391617 (COL4A1)
09154 Digestive system
04974 Protein digestion and absorption
108391617 (COL4A1)
09158 Development and regeneration
04382 Cornified envelope formation
108391617 (COL4A1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
108391617 (COL4A1)
09162 Cancer: specific types
05222 Small cell lung cancer
108391617 (COL4A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
108391617 (COL4A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
108391617 (COL4A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
108391617 (COL4A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mjv04147
]
108391617 (COL4A1)
00536 Glycosaminoglycan binding proteins [BR:
mjv00536
]
108391617 (COL4A1)
Exosome [BR:
mjv04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
108391617 (COL4A1)
Glycosaminoglycan binding proteins [BR:
mjv00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108391617 (COL4A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
108391617
NCBI-ProteinID:
XP_036880743
LinkDB
All DBs
Position
Unknown
AA seq
1668 aa
AA seq
DB search
MGPRLGLWLLLPAALLLHEERSRAAAKGVCAGSGCGKCDCHGVKGQKGERGLPGLQGVIG
FPGMQGPEGPHGPPGQKGDTGEPGLPGTKGTRGPPGASGYPGNPGLPGIPGQDGPPGPPG
IPGCNGTKGERGLLGPPGLPGFTGHPGPPGLPGIKGDPGEILGHVPGALLKGERGFPGTP
GTPGSPGLPGLQGPIGPPGFTGPPGPPGPPGPPGEKGQMGLSFQGPKGDKGDQGVSGPPG
VPGQAQVKEKGEFATKGEKGQKGEPGFQGMPGAGEKGEPGKPGPRGKPGKDGEKGEKGGP
GFPGDSGYPGLPGREGFKGDKGEAGPPGPPGIVIGTGPLGEKGERGYPGSPGLRGEPGPR
GFPGLQGQPGPPGIVIPGQAGAPGYPGERGEKGDQGFPGTSLPGPSGRDGLPGPPGPPGP
PGQPGHTNGIVECQPGPPGDQGPPGIPGQPGLTGEVGEKGQKGESCLICDTAGLRGLPGP
QGPPGEIGFPGQPGAKGDRGLPGRDGLEGLPGPQGAPGLIGQPGAKGEPGEFYFDVRLKG
DKGDPGFPGQPGMPGRVGTSGRDGHPGLPGPKGSPGSVGLKGERGPPGGAGFPGSRGDIG
PPGPPGFGPIGPIGDKGQPGFPGNPGSPGQPGPKGDAGRVMPLPGPPGTEGLPGSPGFQG
PQGDRGFPGTPGRPGLPGEKGTVGQPGIGFPGPPGPKGVDGLPGDLGPPGNPGRPGFNGL
PGNPGTPGQKGEPGVGLPGLKGLPGLPGIPGAPGEKGNIGGPGIPGEHGDIGPPGLQGIR
GDAGPPGLQGPKGAPGVPGIGPPGAMGPPGGQGPPGSLGPPGVKGEKGFPGFPGLDMPGP
KGDKGTQGLPGLTGQSGLPGLPGQQGTPGLPGFPGSKGEMGVMGTPGQPGSPGPAGVPGS
PGEKGDLGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIGP
IGDKGSRGDPGTPGVPGKDGQAGFPGQPGPKGDPGIGGTPGAPGLPGPKGSVGGMGLPGT
PGEKGVPGIPGPQGVPGLPGEKGLKGEKGQSGLPGIGIPGRPGDKGDQGIAGFPGSPGEK
GEKGSTGIPGMPGAPGPKGSPGSVGYPGSPGSPGEKGDKGLPGLDGVPGIKGQAGLPGQA
GPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGTKGEKGSKGDVGFPGLAGSPG
IPGSKGEQGYTGPPGPQGQPGLPGAPGHPIEGPKGDRGPQGQPGLPGLPGPMGPPGLPGL
DGLKGDKGNAGWPGAPGAPGPKGDIGFQGMPGIGGSPGITGAKGDTGLPGVPGFQGQKGL
PGLQGVKGDQGDQGFPGTKGLPGPPGPPGPYDIIKGEPGLPGPEGPAGLKGLQGPPGPKG
QQGVTGSVGLPGPPGIPGFDGAPGQKGETGPFGPPGPRGFPGPPGPDGLPGSMGPPGTPS
VDHGFLVTRHSQTIDDPQCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTMP
FLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPIAGDNIRPFISRCAVCEAPAMVMAVH
SQTIQIPQCPQGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRGT
CNYYANAYSFWLATIERNEMFKKPTPSTLKAGELRTHVSRCQVCMRRT
NT seq
5007 nt
NT seq
+upstream
nt +downstream
nt
atggggccccggctcggcctctggctgctgctgcccgccgccctcctgctccacgaggag
cgcagccgggccgctgcgaagggtgtctgtgctggctctggctgtgggaagtgtgattgc
catggagtgaagggacaaaagggtgaaagaggcctcccggggctacaaggggtcattggg
tttcccggaatgcaaggacccgaggggccgcacggaccgccgggacagaagggcgacacg
ggagagccaggactgccaggaaccaaagggacccgaggaccgccaggagcatcgggttac
cctggaaacccaggacttcctggtattcctggccaagatggtcccccaggtccccctggg
atcccaggatgcaatggaacaaagggagagagagggctcctggggcctccgggcctgcct
gggttcaccggacaccccggaccaccaggattgccaggaataaagggagatccaggtgaa
atacttggccatgtgcccggggccctgctgaaaggtgaaagaggatttcctgggaccccc
ggaacaccgggctcaccaggattgccagggctacaaggtcccattggccccccaggattt
actggaccaccgggtcccccaggccctcctggccctccgggtgaaaagggacaaatgggc
ttgagttttcaagggccaaagggtgacaagggtgatcaaggggtcagtgggcccccagga
gtgccaggacaagcccaggttaaagaaaaaggagaatttgccaccaaaggagagaagggt
caaaaaggtgaacctggatttcagggaatgccaggggctggagagaagggtgaacccgga
aaaccagggccccgaggaaaacctggaaaagatggtgaaaaaggagaaaaagggggtcca
ggatttccaggcgattccgggtacccaggactcccaggccgagaaggttttaagggagac
aaaggcgaagcaggtcccccaggcccacctggaattgttattggcacaggacccctggga
gaaaaaggagagcgggggtacccaggaagcccagggttgagaggagagccgggccccaga
ggtttcccaggattgcaaggccaaccaggccctccaggcatcgtgataccagggcaggct
ggtgctcccggctaccctggcgaaagaggagaaaaaggtgaccaggggtttccaggcaca
tctttaccaggaccaagtggaagggatgggctcccaggccctcctgggccccccgggccc
cctgggcagccaggccacacaaatggaatcgtggagtgccagcccggacctcctggggac
caggggcctcctggaatcccggggcagccggggctaacgggagaagtcggagagaaaggt
cagaaaggagaaagctgcctcatctgtgacacagcaggacttcgtgggctccctgggcca
cagggtcccccaggggaaataggtttcccgggacagccaggggccaagggtgacagaggc
ttacctggcagagatggtcttgaaggattgcctggaccacaaggtgccccagggctgata
ggccagccaggagccaagggagagcctggcgagttttacttcgacgtgcgcctcaaagga
gacaaaggagacccgggttttccaggacagcctggaatgccaggcagagtggggacttct
gggagagatggccatccgggtctgcccggccccaaaggctctccgggttcagtaggactg
aaaggagaacgtggcccccccgggggagctggattccctggcagtcgcggtgacatcggc
cctcctgggcctccagggttcggccccattggtcccattggtgacaaaggacagccaggc
ttccctggaaaccctggatccccaggccagccaggtcccaagggtgacgcaggaagagtg
atgcccctacctggcccccctgggacggaaggactcccggggtcccccggcttccagggc
ccccaaggggaccgaggcttccctggcaccccgggaaggccgggcctcccaggagagaag
ggcaccgttggccagcctggcattggatttccagggcctcccgggcccaaaggtgttgat
ggcctccctggggacttgggacctcctgggaatcctggtcgcccaggatttaatggctta
cctggcaacccaggtacacctggtcaaaagggagagcctggagttggtctgccaggactc
aaaggattgccaggtcttcctggaattcctggtgcacctggagagaagggaaacatcgga
ggaccaggcattcccggggagcacggagatattggccccccaggccttcagggaatcaga
ggtgacgcgggacctcctggattacaaggtcccaaaggagctccaggagttcctggaatc
ggcccccctggagcgatgggccccccaggaggacagggaccaccagggtccttaggcccc
cctggagtgaaaggagagaagggcttccccggattcccaggtctggacatgccgggtccc
aaaggcgataaaggcacccaaggtctccccggcctgacagggcagtcggggctccccggc
cttcctgggcagcagggcacccccggccttcccgggttcccaggctccaaaggagagatg
ggtgtcatggggaccccgggacagcccggctcgccaggaccagctggtgtgccaggatcg
ccaggcgagaaaggggacctcggcttcccgggctcctcgggccccaggggagaccctggc
ttcaagggcgataaaggagatgtcggtctccctggcaagcctgggtccatggataaagtg
gacatgggcagcatgaagggtcagaagggagaccaaggagagaaaggacagattggacca
attggtgataaaggatcccggggagatcctggaaccccaggagtacctgggaaagacggc
caagcagggtttcctgggcagccaggacctaaaggtgatcctggcataggtggaacccca
ggtgccccgggacttcctggaccgaaaggatcagtgggtggaatgggcctgccaggaaca
cctggagaaaaaggtgtgcctggaatccccggcccccagggggtcccgggcttacctggg
gagaagggattgaagggagagaaggggcagtcaggtctccctggcatcggaattccggga
cggcccggggataagggcgatcaagggattgcaggtttcccaggaagtcctggagagaag
ggagaaaaaggaagcactggcattccgggcatgcccggggctcccggccccaaaggctca
ccggggagtgttggctacccaggaagccctgggtcgcctggagaaaaaggtgacaaaggt
ctccctggattggatggcgtccctggcatcaaaggacaagcaggccttccggggcaggcc
ggtcccaccggcccagctggccagaaaggggagcccggcagcgatggaatcccaggctcg
gcgggagagaagggcgaaccaggtctaccaggaagaggattcccagggttcccagggacc
aagggcgagaaaggttcaaagggcgacgtgggtttcccaggactagctgggagtccagga
attcctggatccaaaggcgagcaaggatacacgggtcctccagggccacagggacagccg
gggttgcccggagcaccaggccaccccatagagggacccaagggagaccgaggcccgcag
ggacaacccggcctgccaggacttccgggacccatggggcctccggggctccccgggctc
gatgggctgaaaggcgacaagggaaacgcaggctggccaggggcccccggtgctccaggg
cccaaaggagacatagggttccagggcatgcccgggatcggtggttctccaggaatcaca
ggtgctaagggtgacacgggacttccaggagttccaggattccaaggtcagaaaggtctc
cccggcctccagggagttaaaggagatcaaggagaccaaggcttccctggaactaaaggt
cttcccggacccccaggccccccgggtccttacgatatcatcaaaggggagccagggctc
cccggtcctgagggccccgcagggctgaaggggcttcagggccctccaggccccaaagga
cagcaaggtgtgacaggatcggtgggcttacctggaccaccaggtattcccgggtttgac
ggtgcccctggccagaaaggagagacgggacctttcggacctcccggtccgagaggtttc
ccggggcctccaggccctgatgggctgccaggatccatgggtcccccaggaaccccgtct
gtagatcacggcttccttgtgaccaggcacagtcaaaccatcgacgacccacaatgccct
cctgggaccaaaatcctttaccacgggtactccctgctttatgttcaaggcaacgaacga
gcccacggccaggacttgggcacggccggcagctgcctgcgtaagttcagcacgatgcct
ttcctcttctgcaacatcaacaacgtctgcaacttcgcctcccgcaacgactattcctac
tggctgtccactccggagcccatgcccatgtcgatggcccccattgccggggacaacatc
aggccgtttatcagcaggtgtgcggtgtgcgaggcgccggccatggtgatggccgtgcac
agccagaccatccagatcccgcagtgcccgcagggctggtcctcgctctggatcggctac
tcctttgtgatgcacacgagcgctggtgccgaaggttctggccaagcccttgcgtcccct
ggctcctgtctggaagagtttagaagtgcgccattcatcgagtgccacggccgtgggact
tgtaattactatgcaaacgcttacagcttttggcttgccaccatagagagaaacgagatg
ttcaagaagcccacgccgtccaccctgaaggctggggagctgcgcacacacgtcagccgc
tgccaagtctgcatgagaaggacatag
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integrated database retrieval system
