Manis javanica (Malayan pangolin): 108391628
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Entry
108391628 CDS
T06054
Symbol
SOX13
Name
(RefSeq) transcription factor SOX-13 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
mjv
Manis javanica (Malayan pangolin)
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mjv03000
]
108391628 (SOX13)
Transcription factors [BR:
mjv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
108391628 (SOX13)
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Motif
Pfam:
HMG_box
HMG_WDHD1
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
108391628
NCBI-ProteinID:
XP_017506786
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All DBs
Position
11:complement(103487887..103530372)
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AA seq
614 aa
AA seq
DB search
MSMRSPGSAQLALEGVGTMVNCTVKSEGRKEPCQEALQGSAATAEPQPGDPARAPQDGAD
PPAPAQDCSSPESDGSPGPRRPGGPAAASGSQEKLDFHRNLKEVVPAIEKLLSSDWKERF
LGRCSVETKDVKGTQESLAEKELQLLVMIHQLSSLRDQLLTAHSEQKSVAAMLLERQQQQ
MELARQQQEQIAKQQQQLIQQQHKINLLQQQIQVNMPYVMIPAFPPSHQPLPVTPDSQLA
LPIQPIPCKPVEYPLQLLHSPPAPVVKRSGALAAHHPMQEPSQPLNLTAKPKAPELPNTS
SSPSLKMSTCGPRPPSHGAPTRDLQSSPPSLPLGFLGEGDAVTKAIQDARQLLHGHGGAL
EGSSNAPFRKDLISLDTSPAKERLEESCVHPLDEAVLGCDMDGSRHFPESRNSSHIKRPM
NAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMSNQEKQPYYEEQARLSRQHLEKY
PDYKYKPRPKRTCIVEGKRLRVGEYKALMRTRRQDARQSYVAPPQAGQVQMSSSDVLYPR
VAGMALAQPLVEHYVPRNLDPNMPVIINACSLREEGEATEDRHSVADGEMYRYSEGEDSE
GEEKSDGELVVLTD
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgaggagccccggctctgctcagctggccctggagggcgttggcaccatggtg
aactgtactgtcaagtcagaggggaggaaggagccttgccaggaggccctccagggctca
gccgctacagccgaaccccagcctggagacccagcccgggcccctcaggatggtgctgac
cccccagctccagcccaggactgcagctcgccagagagcgacgggtccccagggcccagg
agaccaggaggtcctgcagctgcttctggaagccaggagaagctggacttccaccggaac
ttaaaagaagttgtgccggccatcgagaagctgctctccagtgactggaaggagaggttt
ctgggaaggtgttccgtagaaaccaaagatgtcaaagggacccaggagagcctggcggag
aaggagctccagcttctggtcatgatccaccagctgtccagcctgcgggaccagctgctg
acagcgcactcggagcagaagagcgtggccgccatgctgctggagaggcagcagcagcag
atggagctggcgcggcagcagcaggagcagatcgccaaacagcagcaacagctgattcag
caacagcataaaatcaacctcctccagcagcagatccaggtcaacatgccttatgtcatg
atcccagccttccccccgagccaccagcctctgcctgtcacccccgactcccagctggct
ttacccattcagcccatcccctgcaagccagtggagtacccgctgcagctgctgcacagc
ccccctgcccccgtggtgaagaggtctggggcgctggccgcccaccaccccatgcaggag
ccctcccaacccctgaacctcacagccaagcccaaggcccccgagctgcctaacacctcc
agctccccgagcctgaagatgagcacctgtggaccccgtccccccagccatggggccccc
acacgggacctgcagtccagcccccccagcctgccgttgggcttccttggtgaaggggac
gctgtcaccaaagccatccaagatgctcgacagctgctccatggccatggcggggccttg
gaaggctcctccaatgcccccttccggaaggacctcatcagcctggacacatccccagcc
aaggagcggctggaggagagctgtgtgcaccccctggatgaagccgtgctgggctgtgac
atggatggttcccgccactttcctgagtcccgaaacagcagccacatcaaaagacccatg
aacgccttcatggtgtgggccaaggacgagcggaggaagatcctccaagccttcccagac
atgcacaactccagcatcagcaagatcctcggctctcgctggaagtctatgagcaaccag
gagaagcagccctactacgaggagcaggcgaggctgagccggcagcacctagaaaaatac
cctgactacaagtacaagccgcggcccaagcgcacgtgcatcgtggaaggcaagaggctg
cgcgtgggcgagtacaaggccctgatgaggacccgacgccaggatgcccgccagagctac
gtggcccccccgcaggctggccaagtgcagatgagctcctcagacgtcctgtaccctcgg
gtggcaggcatggccctggcacagcccctggtggagcactatgtgccccggaacctggac
cctaacatgcctgtcatcatcaacgcctgcagcctcagggaggagggcgaggccacagaa
gacaggcactcggtggccgacggggagatgtaccggtacagtgagggtgaggactcagag
ggcgaggagaagagcgacggggagttggtggtgctcacggactga
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