Manis javanica (Malayan pangolin): 108391811
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Entry
108391811 CDS
T06054
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X1
KO
K07466
replication factor A1
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv03030
DNA replication
mjv03420
Nucleotide excision repair
mjv03430
Mismatch repair
mjv03440
Homologous recombination
mjv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108391811 (RPA1)
03420 Nucleotide excision repair
108391811 (RPA1)
03430 Mismatch repair
108391811 (RPA1)
03440 Homologous recombination
108391811 (RPA1)
03460 Fanconi anemia pathway
108391811 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mjv03000
]
108391811 (RPA1)
03032 DNA replication proteins [BR:
mjv03032
]
108391811 (RPA1)
03400 DNA repair and recombination proteins [BR:
mjv03400
]
108391811 (RPA1)
Transcription factors [BR:
mjv03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108391811 (RPA1)
DNA replication proteins [BR:
mjv03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
108391811 (RPA1)
DNA repair and recombination proteins [BR:
mjv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
108391811 (RPA1)
MMR (mismatch excision repair)
108391811 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
108391811 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
Motif
Other DBs
NCBI-GeneID:
108391811
NCBI-ProteinID:
XP_017507102
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MVGHLSEGAIAAIMQQGDTSIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLAT
QLNCLVEKERLSSNCICQVNRFIVNTLKDGRRVVILMELDVLKSAEAVGLKIGNPVPYNE
GHSQQQVIPSPVSAANPPPSKPQQQNGSSGTGSSTSKTYGASKTFGKAGGSSLVNSSGGT
QARVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESGEIRATAFNE
QADKFFPLIDVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDDHHLPTVQF
DFTGIGDLENKSKDSLVDIIGICKSYEDATKITVKSNNREISKRNIYLMDMSGKVVSATL
WGEDADRFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIVNPDIPEAYKLRGWFDSEGQ
ALDGVSISDLKSGGTGGSNTNWKTLYEVKSENLGQGDKADYFSSVATVVYLRKENCMYLA
CPTQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSVNIADFQENQWVTCFQESAEAIL
GQSTAYLGELKEKNEQAFEEIFQNANFRSFTFKIRVKLETYNDESRIKATVMDVKPVEHR
EYGRRLIMNIRRNAVM
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtgggccacctgagcgagggggctattgcggccattatgcaacagggagatacatca
ataaaacccattctccaagtcattaacatccgtcctattactacaggaaatagtccaccc
cgttatcgactgcttatgagtgatggattgaacactctatcctctttcatgttggcaaca
cagttgaactgtcttgttgagaaagaacgattgtcaagcaactgtatttgccaggttaac
cgatttattgttaacactctgaaagatggaaggagagtagttattttgatggagttagac
gttttgaaatcagctgaagcagttggattaaagattggcaatccggtgccctataatgaa
ggccacagtcagcagcaggtcattccttctccagtctcagcagccaatccaccacccagc
aagccccagcaacagaatgggagctcagggacgggttccagtacatctaagacttatggt
gcctcaaagacatttggaaaagctggaggtagcagcctagtgaacagttctgggggaaca
caggccagagtggtacccattgccagcctcaccccttaccaatccaagtggactatttgt
gctcgtgttaccaacaaaagtcagatccgcacatggagcaattcccgaggggaagggaag
cttttctctatagaactggttgatgaaagtggtgaaatcagagccactgctttcaatgag
caagcagacaagttctttccccttattgacgtgaacaaggtctattatttctctaaaggc
accctgaagattgcaaacaaacaattcacagctgttaaaaatgactatgaaatgaccttc
aataatgagacttctgtcatgccctgtgaagatgatcatcatttacctacagttcagttt
gatttcacagggattggtgacctggagaataagtctaaagactcccttgtagacataatt
gggatctgcaagagctatgaagatgccactaaaatcacagtgaagtctaataacagagaa
atttctaagagaaatatctatctgatggacatgtcagggaaagtggtgtcagctactctg
tggggagaagatgctgatagatttgatggttctagacaacctgtgatggctatcaaagga
gccagagtttctgattttggtgggcggagcctctctgtactgtcctcaagcacggtcatt
gtgaatcctgacatcccagaggcctataagcttcgtggatggtttgactcagaaggacaa
gccttagatggcgtttccatctctgatctaaagagtggaggaacaggagggagcaacaca
aactggaaaactttatatgaggttaaatcggagaacctgggccaaggtgacaaggcagac
tattttagctctgtggcaacagtggtgtatcttcgcaaagagaactgtatgtatttggcc
tgcccaactcaggactgcaataagaaagtgattgatcaacagaatggattgtaccgctgc
gagaagtgtgaccgtgaatttcccaatttcaagtaccgaatgatcctctcagtaaatatt
gctgattttcaagagaatcagtgggtcacttgtttccaggagtctgcagaggctatcctc
ggacaaagcactgcttatcttggggagttaaaagagaagaatgagcaagcatttgaggaa
attttccagaatgccaactttcgatctttcacattcaagatcagggtcaaactagagacc
tataacgatgagtcacgaattaaggccactgtgatggatgtgaagcccgtggagcacaga
gaatatggcagaaggctgataatgaacatcaggagaaacgcagtaatgtga
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integrated database retrieval system
