Manis javanica (Malayan pangolin): 108391861
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Entry
108391861 CDS
T06054
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv01524
Platinum drug resistance
mjv03430
Mismatch repair
mjv05200
Pathways in cancer
mjv05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
108391861 (MSH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
108391861 (MSH2)
09162 Cancer: specific types
05210 Colorectal cancer
108391861 (MSH2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
108391861 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mjv03400
]
108391861 (MSH2)
DNA repair and recombination proteins [BR:
mjv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
108391861 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
108391861
NCBI-ProteinID:
XP_017507205
LinkDB
All DBs
Position
Unknown
AA seq
934 aa
AA seq
DB search
MAVQPRETLQLESAAEVGFVRFFQGMPEKPATTVRLFDRGDFYTAHREDALLAAREVFKT
QGVVKYMGPAGAKTLESVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA
FKASPGNLSQFEDILFGNNDMSACIGVVGIKMSTVDGQRQIGVGYVDSIQRKLGLCEFPD
NDQFSNLEALLIQIGPKECVLPGGETSGDMGKLRQVIQRGGILITERKRADFSTKDIHQD
LNRLLKGRKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYM
KLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL
NLVEAFVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRIYQGINQLPNVIQA
LEKYEGKHQRLLLAVFVTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
LREIMDDLEKKMESTLVSAARDLGLEPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFN
TVDIQKNGVKFTNSKLTSLNEEYTKNKAEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA
QLDAVVSFAHVSNGAPVPYVRPVILEKGQGRITLKASRHACVEVQDEVAFIPNDVHFEKD
KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK
GISTFMAEMLETASILRSATKDSLVIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF
ATHFHELTALANQIPTVSNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPKHV
IECAKQKALELEEFQNIGESQRYDEMEPAAKRCFLEREQGEKIIEDFLSKVKQVPFTEMS
EENIIIKLKQLKAEVIAKNNSFVNEIISRIKVTT
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgagggagacgctgcagctggagagcgcggccgaggtcggcttcgtg
cgcttcttccagggcatgccggagaagccggccaccacggtgcgccttttcgaccggggc
gacttctacacggcgcaccgtgaggacgcgctgctggccgcccgggaggtgttcaagacc
cagggggtggtcaagtacatggggccggcaggagcaaagactctggagagcgttgtgctt
agtaaaatgaattttgagtcttttgtaaaagaccttcttttggttcgtcagtatagagtt
gaagtttataagaatagagctggaaataaggcctctaaggagaatgattggtatttggcg
tttaaggcttctccaggtaatctttctcagtttgaagacattctctttggtaacaatgat
atgtcagcttgcattggagttgtgggcattaaaatgtctactgttgatggccaaagacag
attggagttgggtatgttgactccatacagaggaaactagggctgtgtgagttccctgat
aatgatcagttctcaaatttggaggctcttctgatacagattggaccaaaagaatgtgtt
ttgccaggaggagagacttctggagacatgggaaaactgaggcaggttattcagagagga
ggaattctgatcacagaaagaaaaagagctgacttttctacaaaagatattcatcaagac
ctcaatcggttgttgaaaggcagaaagggtgaacagatgaatagtgctgtcttgccagaa
atggagaatcaggttgcagtttcttcattgtctgcagtaatcaagtttttagaactctta
tcagatgattcaaactttggacagtttgaattgactacttttgacttcagccaatacatg
aaattggatattgcagcagttagagcccttaacctttttcagggttctgttgaagatacc
actggctctcagtctctggctgcactgctgaataaatgcaaaacccctcaaggacaaaga
ctagttaaccagtggattaagcagcctctcatggataagaacagaatagaagagaggtta
aatttagtagaagcttttgtagaagatgcagaattgaggcagagtttacaagaagattta
cttcgtcgattcccagatcttaaccgacttgccaagaaatttcaaagacaagcagcaaac
ctacaagattgttaccgaatctatcagggtataaaccaactccctaatgttattcaggct
ttggaaaaatatgaaggaaaacaccagcgattgttgttggcagtttttgtgactcctctt
attgatcttcgttctgatttctccaagtttcaggaaatgatagaaacaactttagatatg
gatcaggtggaaaaccatgaattccttgtaaaaccttcatttgatcctaatctgagtgaa
ttaagagaaataatggatgatttagaaaagaaaatggagtcaacattagtaagtgctgct
agagatctaggcttggaacctggcaaacagattaaactggattctagtgcacagttcgga
tattactttcgtgtaacgtgtaaggaagaaaaagtccttcgtaacaataaaaactttaat
acagtagatatccagaagaatggtgttaaatttaccaacagtaaattgacttctctcaat
gaagagtataccaaaaataaagccgagtatgaggaagcccaggatgccattgtgaaagaa
attgttaatatttcttcaggctatgtagaaccaatgcagacactcaatgatgtgttagct
cagctagatgctgttgtcagctttgctcatgtgtcaaatggagcacctgttccatatgta
cgaccagtcattttggagaaaggacaaggaagaattacattgaaagcatccagacatgct
tgtgttgaagttcaagatgaagttgcatttattcctaatgatgttcactttgaaaaagat
aaacagatgttccacatcattactggccccaatatgggaggtaaatcaacatatattcgc
caaactggagtgatagtcctcatggcccaaattgggtgttttgtgccatgtgagtcagca
gaagtgtccattgtcgattgcatcttggcccgggtaggggctggtgacagtcaattgaaa
ggaatctccacattcatggctgaaatgttagaaactgcttctattctcagatctgcaacc
aaagattccttagtaatcatagatgagttgggaagaggaacctctacctatgatggattt
gggttagcatgggctatatcagagtacattgcaacaaagattggtgctttttgcatgttt
gcaacccattttcatgaacttactgctttggccaaccagatacctactgttagtaatcta
catgtcacagcactaaccactgaagagaccctaactatgctctatcaggtgaagaaaggt
gtctgtgatcagagttttgggattcacgttgcagagcttgctaatttccctaagcatgtc
atagagtgtgctaaacaaaaagcactggaactagaggagtttcagaatattggagaatca
caaagatatgatgaaatggaaccagcagcaaaaaggtgctttctggaaagagagcaaggt
gaaaaaattattgaagactttttatccaaggtgaagcaagtgccctttactgaaatgtca
gaagaaaacatcataataaagttaaaacagctgaaagctgaggtaatagcaaagaataat
agttttgtaaatgaaatcatttcacgaataaaagttactacatga
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