KEGG   Manis javanica (Malayan pangolin): 108392382
Entry
108392382         CDS       T06054                                 
Symbol
DDB1
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
mjv  Manis javanica (Malayan pangolin)
Pathway
mjv03420  Nucleotide excision repair
mjv04120  Ubiquitin mediated proteolysis
mjv05161  Hepatitis B
mjv05170  Human immunodeficiency virus 1 infection
mjv05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:mjv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108392382 (DDB1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    108392382 (DDB1)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    108392382 (DDB1)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    108392382 (DDB1)
   05161 Hepatitis B
    108392382 (DDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mjv04121]
    108392382 (DDB1)
   03400 DNA repair and recombination proteins [BR:mjv03400]
    108392382 (DDB1)
Ubiquitin system [BR:mjv04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     108392382 (DDB1)
DNA repair and recombination proteins [BR:mjv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      108392382 (DDB1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      108392382 (DDB1)
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st Beta-prop_RIG_2nd Beta_propel
Other DBs
NCBI-GeneID: 108392382
NCBI-ProteinID: XP_036851595
LinkDB
Position
Unknown
AA seq 1140 aa
MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGI
IGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICF
VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH
NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRE
TDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS
QEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEMEHEVAC
LDITSLGDSNGMSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSH
YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHET
SFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE
AEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGET
STPTQGSVLFGTVNGMIGLVTSLSETWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTER
KTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH
NT seq 3423 nt   +upstreamnt  +downstreamnt
atgtcgtacaactacgtggtaacggcacagaagcccaccgcagtgaacggctgcgtgacc
ggacactttacttcagctgaagacttgaacctgttgattgccaaaaatacgagattagag
atctatgtagtcactgcagaggggcttcggcccgtcaaagaggtgggcatgtatgggaag
attgctgtcatggagcttttcagacccaagggggagagcaaggacctactgtttatcctg
acagctaagtacaatgcctgcatcctggaatataagcagagtggtgagagtattgacatc
ataacgcgagcccatggtaatgtccaggaccgcattggccggccttccgagactggcatt
attggcatcatcgaccccgagtgccggatgattggcctacgactgtatgatggccttttc
aaggttattccgctagaccgggacaataaagagcttaaggcctttaacatccgtctggag
gagttgcatgtcatcgatgtcaagttcctatacgggtgccaggcacctaccatctgcttt
gtctaccaggaccctcaggggcggcatgtaaagacctacgaggtgtctctgcgagagaag
gaattcaataagggcccttggaaacaggagaatgtagaagctgaagcttccatggtgatc
gcagtcccggagcccttcggaggggccatcatcatcggacaggaatcaatcacctatcac
aatggtgacaaatacctggcaattgcccctcctatcattaagcaaagtacgattgtgtgt
cacaatcgcgtggaccccaatggttctcgctatctgctgggagacatggaaggacggctt
ttcatgctgcttctggagaaggaggaacagatggatggcactgtcaccctcaaggatctc
cgtgtggagctccttggagagacctctattgctgaatgcttgacatacctcgataatggt
gttgtgtttgttgggtctcgccttggtgactcacagcttgtgaagctcaatgttgacagc
aatgaacaaggctcctatgtagtggccatggaaaccttcaccaatttaggccccattgtg
gacatgtgcgttgtggatctggagaggcaggggcaggggcagctggttacttgctctgga
gctttcaaggaaggttccttgcggatcatccgaaatggaattggaatccacgagcatgcc
agcattgacttaccaggcatcaaaggcctatggccactgcggtctgaccctaaccgggag
actgatgacactttggtactctcttttgtgggccagacaagagttctcatgttaaatggg
gaggaggtggaagaaactgaactgatgggttttgtggacgatcagcagactttcttctgt
ggcaatgtagctcatcagcagcttatccagatcacttcagcatctgtgaggctggtctct
caagagcccaaagctctagtcagtgaatggaaggagcctcagggcaaaaacatcagtgtg
gcttcctgcaacagcagccaggtggtagtagccgttgggagggccctctactacctgcag
atccatcctcaggagctccggcagatcagccacacagagatggagcatgaagtggcctgc
ttggacatcacctcactgggggacagcaatgggatgtcccctctttgtgccattggcctc
tggacagacatctcagcccgaatcttgaagctgccgtcttttgagctactgcacaaagag
atgctgggtggagagataattcctcgttccatcctgatgactacctttgagagtagccac
tacctcctttgtgccttgggagatggggcacttttctacttcggcctcaacattgagaca
gggctgttgagcgaccgtaagaaggtgactctgggcacccagcccacagtactgagaact
ttccgttctctttctaccaccaacgtctttgcttgctctgaccgccccactgtcatctac
agcagcaaccataaattggtcttctccaatgtcaacctcaaggaagtgaactacatgtgt
cccctcaactcagatggctaccctgacagcctggcactggcaaacaacagcaccctcacc
attggcaccatcgatgagatccagaagctgcacatccgcacagtccccctctatgagtct
cccaggaagatctgctatcaggaagtgtcccagtgcttcggggtcctctccagccgcatt
gaagtccaggacacaagtgggggcacaactgccctgaggcccagtgccagcacccaggcc
ctgtccagcagcgtcagctccagcaagctgttctccagcagcacagcccctcatgagacc
tccttcggggaagaggtggaggtgcacaatctcctcatcattgaccagcacacctttgaa
gtacttcatgcccaccagtttctgcagaacgagtatgccctcagcttggtctcctgcaag
ctaggcaaggaccccaacacatacttcattgtgggcacagccatggtgtaccctgaagag
gcggagcccaagcagggtcgcattgtggtctttcagtattcagatggaaaactacagact
gtggctgaaaaggaagtgaaaggggctgtgtactccatggtggaatttaatgggaagctg
ttggccagcatcaatagcacggtgcggctttacgagtggacaacagaaaaggagcttcgc
acggagtgcaatcactacaacaacatcatggcgctctacctgaagaccaagggcgacttc
atcctggtgggcgacctgatgcgctcggtcctgctgctcgcctacaagcccatggagggg
aacttcgaagagattgctcgagactttaaccccaattggatgagtgctgtggaaatcttg
gatgatgacaatttcctcggggctgaaaatgcctttaatttgtttgtgtgtcagaaggat
agtgctgccaccactgatgaggagcggcagcaccttcaggaggttggtctcttccatctg
ggcgagtttgtcaatgtcttttgccacggctctctggttatgcagaatctgggcgagacg
tccacccccacacagggctcggtgctcttcggcacagtcaatggcatgatcgggctggtg
acctcactgtcagaaacctggtacaacctcctgttggacatgcagaatcgcctcaataag
gtcatcaaaagtgtgggcaagattgagcactccttctggagatcctttcataccgagcga
aaaacagaaccagccacaggcttcattgatggagacttgattgagagtttcctagatatc
agccggcccaagatgcaggaggtcgtggcaaacctacagtatgatgatggcagcggaatg
aagcgggaggccactgcagatgacctgataaaggttgtggaggagctgacacggatccat
tag

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