Manis javanica (Malayan pangolin): 108392501
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Entry
108392501 CDS
T06054
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv04140
Autophagy - animal
mjv04148
Efferocytosis
mjv05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108392501 (VPS18)
04148 Efferocytosis
108392501 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108392501 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mjv04131
]
108392501 (VPS18)
Membrane trafficking [BR:
mjv04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
108392501 (VPS18)
Hops complex
108392501 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_RING_C
Clathrin
zf-RING_5
zf-C3HC4_2
zf-RING_16
KNOX2
zf-ANAPC11
zf-RING_Vps41
zf-RING_2
zf-RING_UBOX
zf_RING_Vps8
zf-rbx1
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
108392501
NCBI-ProteinID:
XP_017508294
LinkDB
All DBs
Position
Unknown
AA seq
973 aa
AA seq
DB search
MASILDEYEDSLSRSAVLQPGCPSVGIPHSGYVNAQLEKEVPIFTKQRIDFTPSERITSL
VVSCNQLCMSLGKDTLLRIDLGKANEPNHVELGRKDDARVHKMFLDHTGSHLLIALSSTE
VLYVNRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGQIFEAELSASEGG
LFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGLDGRGFVIATTRQRLFQFIGRAAEGAE
AQGFSGLFAAYADHPPPFREFPSSLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGALDCG
RPDSLLSEERVWEYPEGVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFL
EKFGPLKHMVKDSSTGHVWAYTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPD
CLDTVLAREADFCFRQRRYLESARCYALTQSYFEEIALKFLEARQEEALTEFLQRKLASL
KPAERTQATLLTTWLTELYLSRLGALQGDPEALNLYRETRERFRAFLSSPRHKEWLFASR
ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSP
ILIRHIPCELVDAWIELGSRLDARQLIPALVNYSQGGEAQQVSQAIRYMEFCVNVLGETE
QAIHNYLLSLYARGQPASLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVL
ELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC
PLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQEL
RGRYGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQR
KLGAAPPPAKGSSRAKEAEGGAAAGGPSREQLKADLDELVAAECVYCGELMIRSIDRPFI
DPQRYKEEHLSWL
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccatcctggatgaatacgaggattccctgtcccggtcggcagtcttgcagccc
ggctgccctagcgtgggcattccccactcagggtatgtgaatgcccagctagagaaggag
gtgcccatcttcacgaagcagcgcattgactttaccccatctgagcgtatcaccagtctt
gttgtctcctgcaatcagctctgcatgagcctgggcaaggatacactgctccgcattgac
ttgggcaaggcaaatgagcccaaccatgtggagctggggcggaaggatgatgccagagtt
cacaaaatgttcctggaccacactggctctcacctgctgattgctctgagcagcactgag
gtcctctatgtgaaccgtaatggacagaaggtacggccactggcacgctggaaggggcag
ctggtggagagtgtgggctggaacaaggccctgggcaccgagagcagcacaggccccatc
ctggtcggcactgcccaaggccagatcttcgaagcagagctctcagccagcgagggtggg
cttttcggccctgccccggatctctactttcgtccactgtatgtgctaaatgaagaaggg
ggtccagctcctgtgtgttcccttgaggctgagcgtggcctggatgggcgtggtttcgta
attgccaccactcggcaacgcctcttccagttcataggccgagcagcagagggagctgag
gcccagggcttctcggggctcttcgctgcctacgctgaccacccacccccattccgtgag
ttccccagcagtctgggctatagcgagttggctttctatactcctaagttgcgctctgca
ccccgggcctttgcctggatgatgggggatggcgtgttgtatggagcgttggactgcggg
cggcctgactccctcctaagtgaggagcgagtctgggagtacccagaaggggtaggtcct
ggggccagcccacccctggccatcgtcttgacccagttccacttcctgctgctactggca
gaccgggtggaggcagtgtgcacactgacgggacaggtggtgctgcgggatcacttcctg
gagaaatttggaccactgaagcacatggtgaaggactcctccacgggccacgtgtgggcc
tacacagagcgggctgtcttccgctaccatgtgcagcgagaggcccgggatgtctggcgc
acttacctggacatgaaccgttttgacttggccaaagagtattgtcgagagcggcctgac
tgcctggacactgtccttgcccgggaggctgatttttgctttcgccagcgtcgttacctg
gaaagtgcccgctgctatgcccttacccagagctactttgaggagattgccctcaagttc
ttggaggcccgacaggaggaggctctgactgagttcttgcagcgaaaactggccagtttg
aagccagccgagcgtacccaggccacactgcttaccacctggctgacagagctctatctg
agcaggctcggagctctgcagggtgacccagaggccctgaacctctaccgggaaacacgg
gagcgcttccgtgccttcctcagcagcccccgccacaaggagtggctctttgccagtcgg
gcctccatccatgagctgcttgccagccacggggacacggaacacatggtgtactttgct
gtgatcatgcaggactatgaacgggtggtggcgtaccactgccagcatgaagcctatgag
gaggccctggctgttcttgcccgccaccgtgacccccagctcttctacaagttttcacca
atcctcatccgtcacatcccatgtgagctggtggatgcttggattgagctgggtagccgg
ctggatgctcggcagctcattcctgccctggtgaactatagtcaggggggtgaggcccag
caggtgagccaggccatccgctacatggaattctgtgtgaatgtgctgggcgagactgag
caggctattcacaattacctgctatcgctgtatgctcgaggccagccagcctcattgctg
gcctaccttgagcaggctggtgccagcccacaccgtgtgcattatgacctcaagtatgcg
ctgcggctctgtgctgaacatggccaccaccgtgcttgtgtccatgtttataaggtcctg
gagctgtatgaggaggctgtggacttggccttgcaggtggatgtggacctggccaagcag
tgtgctgacttgcctgaggaagatgaggaactgcgcaagaagctgtggttgaagattgcc
cggcatgtggtgcaggaggaggaagatgtgcaaacagccatggcctgcctggccagctgc
cccctgctcaagattgaggatgtcctgcccttctttcctgactttgtcacaatagaccac
ttcaaggaggcgatctgcagctcacttaaggcctacaaccaccacatccaggagctacag
cgggagatggaagaggccacagccagtgcccagcgcatccgacgggacctgcaggagctg
cggggccgctatggcaccgtggagccccaagacaaatgtgctacctgtgactttcccctg
ctcaatcgccctttttaccttttcctctgtggccacatgttccatgctgactgtttgctg
caggctgtgaggcctggcctgccagcctataagcaggcccggctggaggagctgcagcgg
aagctgggggctgctccaccccctgctaagggctcttcccgggcaaaggaggccgagggt
ggggctgctgctgggggtcccagccgggagcagctcaaggctgacctagatgaactggtg
gcagctgagtgtgtgtactgtggggaactgatgatccgctctatcgacagacccttcatt
gacccccagcgctacaaggaggagcatctcagctggctgtag
DBGET
integrated database retrieval system
