Manis javanica (Malayan pangolin): 108392740
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Entry
108392740 CDS
T06054
Symbol
RABGEF1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
108392740 (RABGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mjv04131
]
108392740 (RABGEF1)
Membrane trafficking [BR:
mjv04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
108392740 (RABGEF1)
Protein recycling
Other Rab GTPase associated proteins
108392740 (RABGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Motif
Other DBs
NCBI-GeneID:
108392740
NCBI-ProteinID:
XP_017508648
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MSLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQEDWELAER
LQREEEEAFASSQSSQGAQSLTFSKFEEKKTNEKTRKVTTVKKFFSASTRAGSKKAEIQE
AKAPSPSINRQTSIETDRVSKEFIEFLKTFHKTGQEIYKQTKLFLEAMHYKRDLSIEEQS
ECTQDFYQNVAERMQTRGKVPPERVEKIMDQIEKYIMTRLYKYVFCPETTDDEKKDLAIQ
KRIRALHWVTPQMLCVPVNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIF
NAIKVTKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNL
CCAVAFIEKLDAQSLNLSQEDFDRYMSGQSSPRKQESENWSSDACLGVKQMYKNLDLLSQ
LNERQERIINEAKKLEKDLIEWTDGITKEVQDIVEKCPLEINPPNQSLAAIDSENVENDK
LPPPLQPQVYAG
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgagccttaagtctgaacgccgaggaattcacgtggatcagtcagagctcctgtgcaag
aaaggatgtggttactatggcaaccctgcttggcagggtttctgctccaagtgctggagg
gaggagtaccacaaagccaggcagaagcagattcaggaagactgggaactggcagagcga
cttcagcgggaggaggaagaggcctttgccagcagtcagagcagccagggggcccaatcc
ctcacattttcaaagtttgaagaaaagaaaaccaatgagaagacccggaaggttacaaca
gtaaagaaattcttcagtgcttcaaccagggctggatcaaagaaggcagaaattcaggaa
gcaaaagctcccagtccttccataaaccggcaaaccagcattgaaacggatagagtgtct
aaagagttcatagaatttctcaagaccttccacaagacaggccaagaaatctataagcag
accaagctgtttttggaagcaatgcattacaaaagggatttaagcattgaagaacagtca
gagtgtactcaagatttttaccagaatgtagctgaaagaatgcagactcgtggaaaagtg
cctccagaaagagttgagaagataatggatcagattgaaaagtacatcatgactcgtctc
tataaatatgtattctgtccagaaactactgatgatgagaagaaagatctcgctattcaa
aagaggatcagagccctgcactgggttacacctcagatgctttgtgtccctgttaatgaa
gaaattccagaagtgtctgatatggtggtgaaagcaattacagacatcattgaaatggat
tcaaagcgtgtgccccgagataagttggcctgcatcaccaagtgcagcaagcacatcttc
aatgccatcaaggtcaccaagaatgagccagcttcagctgatgacttcttacccactctc
atctacattgttttgaagggcaatcccccacgccttcagtccaatatccagtatatcacc
cgcttctgcaacccaagcagattgatgaccggagaggatggctactatttcaccaatctg
tgctgtgccgtggccttcattgagaaattagatgcccagtctttgaatttaagtcaggaa
gattttgatagatacatgtctgggcagtcttctccaaggaagcaagagtctgagaactgg
tcttctgatgcttgcttaggggttaagcaaatgtataaaaacttggatctcctgtctcaa
ctgaatgaacgacaggaaaggatcataaatgaagcgaagaaacttgaaaaagacctaata
gagtggacggatggaattacaaaagaggttcaagacattgtagagaaatgtccacttgaa
attaaccccccaaatcaatctttagcagctattgactctgaaaatgttgaaaatgataaa
cttcctccaccattgcaacctcaagtgtatgcaggatga
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