Manis javanica (Malayan pangolin): 108393167
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Entry
108393167 CDS
T06054
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
mjv
Manis javanica (Malayan pangolin)
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mjv03036
]
108393167 (CHD5)
Chromosome and associated proteins [BR:
mjv03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
108393167 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
108393167
NCBI-ProteinID:
XP_036856062
LinkDB
All DBs
Position
Unknown
AA seq
1957 aa
AA seq
DB search
MRGPLGSEEELPRLFADEMENEDEMSEEEDGGLEGFEDFFPEEPVSLPKKKKAKKLKESR
SKGKRKKKEGSNDELSENEEDLEKSESEGSDYSPNKKKKKKLKDRKEKRAKRKKKDEDED
DNDDGSLKEPKSSGQLMAEWGLDDVDYLFSEADYHTLTNYKAFSQFLRPLIAKKNPKIPM
SKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVAIAPPLAVSPPQALQPVPIRK
AKTKEGKGEAGGPGVRKKIKGSKDSKRKGKGKKAAGLRFRFGGISSKRKKCSSSEEDERE
ESDLDSASIHSSSVRSECSAAPGKKSRRRRKKKRADDGDGYETDHQDYCEVCQQGGEIIL
CDTCPRAYHLVCLDPELERAPEGKWSCPHCEKEGVQWEPKDDEEEEEEGGCEEEEDDHME
FCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRW
TEPPAPFMVGLPGPDIEPGVPQPKALEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTV
MYRNYQRKNDMDEPPPFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRI
LNHSFDRKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYDNLKQAYWGHRELMLGEDARLPK
RLVKKGKKVKDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQ
GTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYV
VTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILG
SIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPER
FNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQK
KYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGS
SLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGG
LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRI
GQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGT
EELFKDDVEGMMSQGQRPVTPIPDVQSSKGGALAASAKKKHGSTPPGDNKDVEDSSVIHY
DDAAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDP
DYWEKLLRHHYEQQQEDLARNLGKGKRVRKQVNYNDASQEDQEWQDDLSDNQSEYSIGSE
DEDEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIM
RWGMPPQDAFNSHWLVRDLRGKTEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSR
QHVLTRIGVMSLVRKKVQEFEHVNGRYSTPDLIPEGPEGKKPGEVISSDPNTPVPASPAH
LPAAPPGLPDKMEAQLGYMDDKEPGVQKPKKPPEMQALPASLDRLEGDDKHESPDGKERA
LEERREEMEKAQPSPEQLLKEEVLPEKEKILDKLELSLIHGRGDGSDFRPDNTKAEEKEP
IETQQNGDKEEDEEGKKEDKNGKFKFMFNIADGGFTELHTLWQNEERAAVSSGKIYDIWH
RRHDYWLLAGIVTHGYARWQDIQNDPRYMILNEPFKSEIHKGNYLEMKNKFLARRFKLLE
QALVIEEQLRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVL
HKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRAGDPTIQQGAF
GSSQMYSNNFGPNFRGPGPGGIVNYNQMPLGPYVTDI
NT seq
5874 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcccgctgggcagcgaggaggagctgccgcggctgttcgcggacgagatggag
aacgaagacgagatgtcagaagaagaagatggtggcctagaaggcttcgaggacttcttc
cctgaggagcccgtgagccttcccaagaagaagaaagccaagaagctcaaggagagcagg
tccaaagggaagcggaagaagaaagaggggagcaatgacgaactgtcggaaaacgaggag
gacctggagaagtcggagagtgagggcagcgactactcccccaataaaaagaagaagaag
aaactcaaggacaggaaggagaagagagccaaacggaaaaagaaggacgaggacgaggat
gacaacgatgacgggagcctgaaggagcccaagtcctcggggcagctcatggctgagtgg
ggcctggacgatgtggactacctgttctcagaggccgactatcacacgctgaccaactac
aaggccttcagccagtttctcaggccgctcatcgccaagaagaacccgaagatccccatg
tccaaaatgatgacagttctgggtgccaagtggcgggagttcagcgccaataaccccttc
aagggcagctccgcggccgcggcggctgcggcggtggctgctgccgtggagacagttgcc
atcgcccctccactggctgtgagccccccgcaggcactgcagcctgtgcccatccgcaag
gctaagaccaaggagggcaagggtgaggctggggggccaggagtgaggaagaagatcaag
ggctccaaggactcgaagaggaagggcaaggggaaaaaggcggccgggctcaggttccgc
ttcggcggcatcagcagcaagaggaagaaatgctcctcgagcgaggaggatgagcgggag
gagtcggacttggacagcgccagcatccacagctcctccgtgcgctccgagtgctccgcg
gccccggggaagaagagcaggaggaggcgcaagaagaagagggcggacgatggcgacggc
tacgagacggaccaccaggactactgcgaagtgtgccagcagggcggggagatcatcctg
tgcgacacctgcccgcgggcctaccacctcgtctgcctcgacccggagctggagagggcg
cccgagggcaagtggagctgcccgcactgtgagaaggaaggggtccagtgggagccgaag
gacgacgaggaggaggaggaggagggcggctgcgaggaggaggaggacgaccacatggag
ttctgccgcgtgtgcaaggacggcggggagctgctctgctgcgacgcctgcccctcctcc
taccacctgcactgcctcaacccgccgctgcccgagatcccaaacggtgaatggctctgc
ccgcgctgtacttgtcccccactgaagggcaaagtccagcggatcctacactggaggtgg
acggagcccccagcccctttcatggtggggctgccaggacctgacattgagcctggtgtc
ccccaacccaaggccctggagggcatcccggagagagagttctttgtcaagtgggctggg
ctctcctactggcactgctcctgggtgaaggagctacagctagagctgtaccacacggtg
atgtaccgcaactaccaaagaaagaacgacatggacgagccgccgccctttgactatggc
tccggtgacgaggatggcaagagcgagaagaggaagaacaaggaccctctctatgccaag
atggaggagcgcttctaccgctacggcatcaagcccgagtggatgatgatccaccgcatc
ctgaaccacagcttcgacaggaagggcgatgtccactacctgatcaagtggaaggacctg
ccctacgaccagtgcacctgggagatcgacgacatcgacatcccctactacgacaacctg
aagcaggcttactggggccacagggagctgatgctgggggaagacgccaggctgcccaag
aggctggtcaagaagggcaagaaggtgaaggacgataagcaggagaagcctccagacaca
cccatcgtggatcccacagtcaagtttgacaagcagccctggtatattgactccacgggc
ggcacacttcacccataccagctggagggcctcaactggctgcgcttctcctgggcccag
ggcaccgacacaatcctggccgacgagatggggctgggcaagacggtgcagaccatcgtc
ttcctctactccctgtacaaggaggggcactccaaaggtccctacctggtcagcgcaccc
ctgtccaccatcatcaactgggagcgtgagttcgagatgtgggcgcccgacttctatgtg
gtcacctacactggggacaaggagagccgctctgtgatccgggagaatgagttttccttt
gaggacaatgccattcggagtgggaagaaggtgttccgcatgaagaaagaagtgcagatc
aaattccatgtcctgctcacctcctacgagctcatcaccattgaccaggccatcctgggc
tccatcgagtgggcctgcctcgtggtggatgaggcccaccggctcaagaacaaccagtcc
aagttctttagggtcttgaacagctacaagatcgattacaagctgctgttgacagggacg
ccccttcagaacaacctggaggagctgttccacctccttaacttcctgaccccagagagg
ttcaacaacctggagggcttcttggaggaatttgctgacatctctaaggaagaccagatc
aagaagctgcatgacctgctggggccccacatgctgaggcggctcaaggccgatgtattc
aagaacatgccagccaagaccgagctgatcgtccgcgtggagctgagccagatgcagaag
aagtactacaagttcatcctcacgcggaactttgaggcgctcaactccaaggggggtggg
aaccaggtgtcgctgctcaacatcatgatggacctgaagaagtgttgcaaccacccctac
ctcttccccgtggctgccgtggaggcccctgtcttgcccaatggctcctatgatggtagc
tccctggtcaagtcctcagggaagctcatgctgctacagaagatgctcaagaagctgcgg
gatgagggacaccgtgtgctcatcttctctcagatgaccaagatgctggacctcctggag
gacttcctggagtatgagggctacaagtatgagcggattgatgggggcatcaccgggggc
ctccggcaagaggcgatcgacagatttaacgcccctggggcccagcagttctgctttctc
ctttccacccgggctggtggcctgggcatcaacctggccacggcagacaccgtcatcatc
tacgactcggactggaatccacacaacgacattcaggccttcagccgtgcccaccgcatc
gggcagaacaagaaggtgatgatctaccgctttgtgacccgggcctcggtggaggagcgc
atcacgcaggtggccaagcgcaagatgatgctcacccacctggtggtgcggcccggcctc
ggctccaagtcgggctccatgaccaagcaggagctggatgacatcctcaagtttggcaca
gaggagctcttcaaggacgatgtggagggcatgatgtctcagggccagaggccagtcacg
cccatacctgacgtccagtcctccaaagggggagccctggccgccagcgcaaagaagaag
catggcagcaccccgccaggggacaacaaggatgtggaggacagcagcgtgatccactat
gatgacgcagccatctccaagctactggaccggaaccaggacgccacggacgacacggag
ctgcagaacatgaacgagtacctgagctccttcaaggtggcgcagtatgtggtgcgcgag
gaggacggcgtggaggaggtggagcgggagatcatcaagcaggaggagaacgtggacccc
gactactgggagaagctgctccggcaccactacgagcagcagcaggaggacctggcccgg
aacctgggcaaaggcaagcgtgtccgcaagcaggtcaactacaatgacgcctcccaggag
gaccaggagtggcaggatgacctctcagataaccagtctgaatactccattggctctgag
gatgaggacgaggactttgaggaaaggccagagggacagagtggacggcgacagtccagg
aggcagctgaagagtgacagggacaaacccctgccaccccttcttgcccgtgtgggcggc
aacatcgaggtgctgggcttcaacgcccgacagcggaaggccttcctgaacgccatcatg
cgctggggcatgcccccccaggacgccttcaactcccactggctggtgcgggaccttcga
gggaagactgagaaggagttcagagcctatgtgtccctcttcatgcggcacctgtgtgag
ccgggggctgatggcgcggagacctttgcggacggcgtgccccgtgagggcctctccagg
cagcacgtgctcacgcgcattggggtcatgtcactagttaggaagaaggtccaggagttt
gagcacgtcaatgggaggtacagcaccccggacttgatccctgaggggcctgagggcaag
aagccgggtgaggtcatctcctctgatcccaacacgccagtgcctgccagcccagcccac
ctcccagctgccccgccgggcctgccagacaaaatggaagcccagctgggctacatggat
gacaaggagccgggggtgcagaagccaaagaagcccccagaaatgcaggccctgccagct
tccttggacagactggagggtgacgacaagcatgagagcccagatggcaaggagagggcc
ctggaggagcggcgggaggagatggagaaggcccagccctccccggagcagctattaaaa
gaagaagtacttcctgagaaggagaaaattctggataagctggagctaagcttgattcac
ggcagaggggacggcagtgatttcaggccagataacaccaaagctgaggagaaggagccc
attgagacacagcaaaatggtgacaaagaggaagacgaggagggcaagaaggaggacaag
aatgggaagttcaagttcatgttcaacattgcagatgggggcttcacagagctacacacc
ctgtggcagaatgaggagcgtgctgctgtgtcctcggggaaaatctacgacatctggcac
cggcgccatgactactggctgctcgcgggcattgtgacgcatggctatgcccgctggcag
gacatccagaacgacccgagatacatgatcctcaatgagcccttcaagtctgagatccac
aagggcaactacctggagatgaagaacaagttcctggcccgcaggttcaagctgctggag
caggcgctggtcatcgaggagcagctccggagggccgcgtacctcaacatgacccaggac
cccaaccacccagccatggccctcaatgcccgcctggctgaggtggagtgcctggctgag
agccaccaacacctgtccaaggagtcccttgctgggaacaagcctgccaatgccgtcctg
cacaaggtcctgaaccagctggaggagctgctgagtgacatgaaggcagacgtgacgcgc
ctgccctccatgctgtcccgcatccccccggtggccgcccgcctccagatgtcagagcgc
agcatcctcagccgcctgaccaaccgagccggtgaccccaccatccagcagggcgctttc
ggctcctcccagatgtacagcaacaactttgggcccaacttccggggccccggaccggga
gggattgtcaactacaaccagatgcccctggggccctatgtgaccgatatctag
DBGET
integrated database retrieval system
