Manis javanica (Malayan pangolin): 108393639
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Entry
108393639 CDS
T06054
Symbol
NXF1
Name
(RefSeq) nuclear RNA export factor 1
KO
K14284
nuclear RNA export factor
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv03008
Ribosome biogenesis in eukaryotes
mjv03013
Nucleocytoplasmic transport
mjv03015
mRNA surveillance pathway
mjv05014
Amyotrophic lateral sclerosis
mjv05164
Influenza A
mjv05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108393639 (NXF1)
03015 mRNA surveillance pathway
108393639 (NXF1)
03008 Ribosome biogenesis in eukaryotes
108393639 (NXF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
108393639 (NXF1)
05168 Herpes simplex virus 1 infection
108393639 (NXF1)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
108393639 (NXF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mjv03019
]
108393639 (NXF1)
03009 Ribosome biogenesis [BR:
mjv03009
]
108393639 (NXF1)
Messenger RNA biogenesis [BR:
mjv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108393639 (NXF1)
mRNA cycle factors
Stress granule specific factors
108393639 (NXF1)
Ribosome biogenesis [BR:
mjv03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
108393639 (NXF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
LRR_8
UBA_8
LRR_9
LRR_4
Motif
Other DBs
NCBI-GeneID:
108393639
NCBI-ProteinID:
XP_017510090
LinkDB
All DBs
Position
Unknown
AA seq
619 aa
AA seq
DB search
MADEGKSYNEHDDRVSFPQRRKKGRGPFRWKYGEGNRRSGRGGSAIRSSRVEEDDRDVAM
TDAQDVPRGVRYNPYAARPNRRGDSWHDRDRIHVTVRRERALPERGGAGTSQDGTSKNWF
KITIPYGRKYDKAWLLSTIQSKCSVPFTPIEFHYENTRAQFFVEDASTASALKAVNYKIL
DRENRRISIVINSSAPPHSIQNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVA
QNIDVVLNRRSCMVATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSE
NELKSERELDKIKGLKLEELCLDGNTMCDTFRDQSAYISAIRERFPKLLRLDGHELPPPI
SFDVEAPTTLPPCKGSYFGTETLKNLVLHFLQQFYTVYDSGDRQRLLDAYHDAACCSLSI
PFTPQNPARSTLAEYFKDSRNVKKLKDPTLRFRLLKHTRLNVVAFLNELPKTQHDINSFV
VDISAQTSTLLCFSVNGVFKEVDGKSRDSLRAFTRTFVAVPASSSGLCIVNDELFVRNAS
PDEIQRAFAMPAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTTSA
QAFTHLKAKGEIPEIAFLK
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggggaagtcctacaacgagcatgatgaccgcgttagtttccctcaaaga
agaaagaaaggccggggtcctttccggtggaaatacggtgaggggaaccgtaggtctgga
agaggaggttctgccattcggtcttcccgtgttgaggaagatgacagagacgtggcaatg
actgacgcccaggatgttcctcgaggagtacgatacaacccctatgctgcccgacccaac
cgtcggggtgatagttggcatgatcgagaccgcattcatgttactgtgcggagagaaaga
gctcttccagagagagggggcgctggcaccagccaggatggaacctcgaagaactggttt
aagattacaattccttacggcagaaaatatgacaaggcatggctcctgagtacgattcag
agcaaatgcagtgtccctttcacccccattgagtttcactatgaaaacacacgggcccag
ttttttgttgaggatgccagtactgcctctgcattgaaggctgtcaactacaagattttg
gatcgggagaaccgaaggatatctatcgttatcaactcctcggctccaccccattctata
cagaatgaactgaagcctgaacaagtagaacagctaaagctcatcatgagcaaacgatac
gatggctcccaacaggctctggacctcaagggcctccgttcagacccagacttggtggcc
cagaacattgatgttgtcctgaatcggaggagctgtatggtggctaccctgcgaatcatt
gaagagaacatccctgagctattgtccttgaatttgagcaacaacaggctatacaggctg
gatgacatgtccagcattgtgcaaaaagcacccaacctgaagatcttaaacctctctgaa
aatgaactgaagtcagagcgggagttggacaagataaaagggttgaagttggaagagctg
tgtctcgacggaaacaccatgtgtgacaccttccgagaccagtccgcttacatcagcgcc
attcgagaacgatttcccaaactactacgcctggatggtcacgagttaccaccgccaatt
tcctttgatgttgaagcccccacaacgttaccaccttgcaagggaagctactttggaaca
gagaccctgaagaatctggtcctgcacttcctgcagcagttctataccgtttatgactct
ggggaccggcagcggctcctggacgcctaccacgatgcggcctgctgctccctgagcatt
cctttcacgccacagaaccccgcccgaagcaccttggctgaatatttcaaagatagcagg
aatgtgaagaagcttaaagacccgaccttgcgcttccggctgctgaagcacacgcgtctc
aacgttgtggcctttctcaatgaactgcccaagacccagcacgacatcaattccttcgtg
gtagacataagcgcccagacaagcacgttgttgtgtttttctgtcaatggggtcttcaag
gaagtggatggaaagtcccgggattccttacgagccttcacccggacatttgtcgctgtt
cctgccagcagttcagggctgtgtattgtaaacgacgagctgtttgtgcggaatgccagc
cctgatgagatccaaagagccttcgccatgcctgcccccacgccttcctccagcccagtg
cccaccctctctccagagcagcaggaaatgctgcaggcattctctacccagtctggcatg
aacctcgagtggtcccagaagtgccttcaggacaataactgggactataccacatctgcc
caggccttcactcatctcaaggccaagggcgagatcccagaaatagcgttcctgaagtga
DBGET
integrated database retrieval system
