Manis javanica (Malayan pangolin): 108393954
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Entry
108393954 CDS
T06054
Symbol
SMARCAD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
108393954 (SMARCAD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mjv03036
]
108393954 (SMARCAD1)
Chromosome and associated proteins [BR:
mjv03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
108393954 (SMARCAD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
ERCC3_RAD25_C
CUE
TTC3_9th
Motif
Other DBs
NCBI-GeneID:
108393954
NCBI-ProteinID:
XP_036876058
LinkDB
All DBs
Position
Unknown
AA seq
1028 aa
AA seq
DB search
MNLFNLDRFRFEKRSKIEEVPEATPQPSQPGPSSPISLSAEEENAEGEVSRAGTPDSDIT
EKTEDSSVPETPENERKASISYFKNQRGIQYIDLSSDSEDIVSPNCSSTIQEKKFNKDTV
IIVSEPSEDEESQGLPPVAHRKNDDISELEDLSELEDLKDAKLQTLKELFPQRSDNDLLK
LIESTSTMDGAIAAALLMFGDAEGGGPRKRKLSSSSEPYEDDEFNDDQSIKKKRLDHGEE
SSESAESSNNWEKQESIVLKLQKEFPNFDKQELREVLKEHEWMYTEALESLKVFAEDQDM
QYASHSEFPNGKEVSSRSQNYPKNAAKTKLKQKCSMKPQNGFNKKRKKNAFNPKRIIEDS
EYDSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKITEL
RPFNCWEALFTKMSKTNGLSEDLIWNCKTLIQERDVVIRLMNKCEDISNKLTKQVTVLTG
NGGGWNIEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAY
LYQEGNKGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSKYEEYN
VIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGT
PVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKPF
ILRRVKEEVLKQLPPKKDQIELCAMSEKQEQLYLGLFNRLKKSINNMEKNTEMCNVMMQL
RKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYR
HINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYL
RLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQ
AEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEGDEGSMPADIAT
LLKTSMGL
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttttcaatctggaccgatttcgctttgagaaaaggagtaagattgaggaagtg
cctgaagcaacccctcaaccttcccagcctggcccttcctcaccaatttctcttagtgct
gaagaagagaatgctgaaggggaggttagcagggcaggcacacctgattcagatataacc
gagaaaacagaagattctagtgttccagaaactccagaaaatgaaagaaaagcaagtata
tcatatttcaagaatcaaagaggaatacagtatattgatttatcttctgatagtgaagat
atcgtttccccaaattgctcaagtacaattcaagagaaaaaattcaacaaagacacagtg
attatagtttctgagccatctgaagatgaagaatcccaaggccttcctcctgtggcacat
agaaagaatgatgatatttcagaattggaagacctttcagaattggaagaccttaaagat
gctaagcttcagaccttgaaggaacttttcccacaaagaagtgacaatgatttacttaag
ttgattgaatcaacaagcactatggatggagcgattgctgctgccttgctgatgtttggt
gatgcagaaggcggtggacccagaaaaagaaaactgtcttcttcttcagagccatatgag
gacgatgaatttaatgatgatcaatctataaaaaagaaaagactggatcatggagaagaa
tcaagtgaatctgcagaatctagcaataattgggaaaagcaggaaagtattgtattgaaa
ttgcaaaaggaatttcccaattttgataaacaggaactaagagaagtactcaaggaacat
gaatggatgtacacagaagctttagaatctttaaaagtgtttgcagaagaccaagatatg
caatatgcatcacatagtgagtttccaaatggaaaagaagtttcttcaagaagtcagaat
tatcctaaaaatgcagctaagacaaaactgaaacagaaatgttccatgaaaccacaaaat
ggttttaacaagaaacgtaaaaaaaatgcatttaatcctaaaagaattattgaagactct
gaatatgattcaggttctgatgtcggtagttcactagatgaggactatagtagtggtgaa
gaagtgatggaggatggctataaaggtaaaattcttcacttccttcaagatgcttcaatt
ggtgaacttactttgattcctcagtgttctcagaaaaaggctcagaagataacagaactc
cggccctttaattgttgggaagctctgttcacaaaaatgtccaaaactaatggcttatca
gaagatttgatatggaactgtaaaacactgatccaagaaagggatgtagtcataaggctt
atgaacaaatgtgaagatatttcaaataaattgacgaaacaagtcactgtgctcactgga
aatggaggtggatggaacatagaacaaccctccattttaaatcaaagtttgtcactcaag
ccctatcagaaggttggtttgaattggctggccttggtgcataaacatggacttaatggc
attttggcagatgaaatgggcctgggaaaaactattcaagccattgcattcctggcctac
ctctatcaggagggtaataaaggtcctcatttgatcgttgttccagcatcaactatagat
aactggttaagggaagttaatctgtggtgccccactttaaaggtgctctgttactacggt
tctcaagaagaacgtaaacagattagatataacattcatagtaaatatgaagaatacaat
gtaatagtgaccacgtataattgtgcaatcagcagttctgatgaccgtagtctgtttcga
cggctgaaacttaattatgcgatttttgatgaaggccatatgctgaagaatatgggctcc
atccgctaccagcaccttatgactattaatgcaaataaccgtttgctgctcacaggaaca
cctgtacagaataatctcttagaactcatgtctctgttgaattttgttatgccacatatg
tttagtagtagcaccagtgaaatacgaagaatgttttcttctaagacaaaatcagcagat
gaacaaagtatatatgaaaaagagagaatagcacatgcaaaacaaattataaaaccattt
attctcagaagagtaaaagaagaggttctcaagcagctaccccccaagaaagatcaaatt
gaattgtgtgcaatgtcagaaaaacaggaacaactctatttgggtcttttcaacagattg
aaaaaatctatcaataacatggaaaaaaacacagaaatgtgcaatgtcatgatgcagttg
agaaaaatggccaatcatcctttattacatcgccaatattacacagctgaaaaactcaag
gaaatgtctcaacttatgctgaaggaacctacacattgcgaggctaaccctgacctaatc
tttgaagatatggaagttatgacagacttcgaattacatgtactttgtaaacaatatcga
cacattaataacttccagttagatatggacttgattttagattctggaaaatttcgagtt
ttaggatgcatcttgtctgaattgaaacagaagggtgacagagttgtcttatttagccaa
tttaccatgatgctggatattttagaggttcttttaaaacatcatcagcataggtacctc
agattagatggaaagactcagatttctgaaaggattcatctaattgatgagtttaatacc
gatatggatatctttgtgtttctgctgtcaacaaaagctggtggcctaggaataaacctg
acttcagcaaatgttgttatacttcacgatattgactgtaatccttacaatgacaaacaa
gcagaagatagatgccatagagtaggccagactaaagaagtactagttataaaattaata
agccaagggacaattgaagaatccatgctaaaaattaatcaacagaaattgaaactagag
caagatatgaccacagtagatgaaggtgatgaaggaagtatgccggcagatatagccaca
ttactaaaaacgtcaatgggcctgtga
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