Manis javanica (Malayan pangolin): 108395082
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Entry
108395082 CDS
T06054
Symbol
ARID1B
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1B
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv03082
ATP-dependent chromatin remodeling
mjv04714
Thermogenesis
mjv05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108395082 (ARID1B)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
108395082 (ARID1B)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
108395082 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mjv03000
]
108395082 (ARID1B)
03021 Transcription machinery [BR:
mjv03021
]
108395082 (ARID1B)
03036 Chromosome and associated proteins [BR:
mjv03036
]
108395082 (ARID1B)
Transcription factors [BR:
mjv03000
]
Eukaryotic type
Helix-turn-helix
ARID
108395082 (ARID1B)
Transcription machinery [BR:
mjv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108395082 (ARID1B)
Chromosome and associated proteins [BR:
mjv03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
108395082 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
108395082
NCBI-ProteinID:
XP_036879415
LinkDB
All DBs
Position
Unknown
AA seq
2315 aa
AA seq
DB search
MAARARAGSGERRAPPGPRPAPGARDLEAGARGAVAAAAPGPVLGGGDGGGPSSVHHHPL
HPRHDLNMAHSASAAAAASTGSAKSGGSSAALTEGASAAAPPSSSSSAAAACSSSSSGPG
SAMETGLLPNHKLKAVGEAAAAPPQQHHHHRHAHHHHHAHLHHHRHHALQPLSQFQPQPA
SNSSLGGAAQPAPDMEQPQHGGAKDSAAGSQADPPGQPLLSKPGDEDDAPPKMGEPAGGR
FEHSSLSALGAQQPPVAVPGGGGGPAAGSEFNNYYGSAVPASGGPGGRAGPCFDQHGGQQ
SPGMGMMHSASAAAGAPSSMDPLQNSHEGYPGSQYNHYPGXGGGAAGAVAAAAAAAAAAA
AGGGGGGGGYGGSSSGYGVLSAPRQQGGGMMMGPGGGGAASLSKAAAGAAAGGFQRFAGQ
SPHPSGATPTLNQLLTSPSPMMRSYGGGYPDYSSPSAPPPPPSQPQSQAAAAAGAAAGGQ
QAAAGMGLGKDLGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQ
LYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPISIQGRTPGAMGGMQYPQQQMPPQYGQQ
GVSGYCQQGQQPYYNQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPG
KPNHEDLNLIQQERPSSLPVEVLTSEDTAFGLKDLSGSIDDLPTGTEAALSSAVSASGST
SSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPP
QPPGSQAESSSHPALSQSPMPQERGFMAGTQRNPQMSQYGPQQTGPSMSPHPSPGGQMHP
GISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGINANNQMHGQG
PSQPCGALPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAA
AAVMQAAANSAQSRQGSFPGMNQSGLLASSSPYSQPMNNSSGLMNTQASPYSMTPNMVNS
STAPMGLADMMSPGDPKLPLKADGKEDGAPQPESKSKDSYSSQGISQPPTPGNLPVPSPM
SPSSASISSFHGDESDSISSPGWPKTPSSPKSSSSSTTGEKITKVYELGNEPERKLWVDR
YLTFMEERGSPVSSLPAVGKKPLDLFRLYICVKEIGGLAQVNKNKKWRELATNLNVGTSS
SAASSLKKQYIQYLFAFECKIERGEEPPPEVFSAADTKKQPKLQPPSPANSGSLQGPQTP
QSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTVSVHDPFSDASDSSFPKRNSMT
PSTPYQQGMSMPDVMSRVPYEPNKDPFGGMRKVPGSSEPFMTQGQMPTSSMQDMYNQSPS
SAMSGLGMGQRQQFPYGASYDRRHEPYGQQYASQGPPSGQPPYGGHQPGLYPQQPNYKRH
MDGMYGPPAKRHEGDMYSMQYGSQQQQEMFNQYGSSYSGPDRRPVQGQYPYPYNRERMQG
PGQMQPHAIPPQMLGGPMPASSSEGPQQSMWAARNDMPYPYQNRQGPGGPAQAPPYPGMS
RTDDMMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQSSYPTAPSLPNHISRAP
SPASFQRSLESRMSPSKSPFLPSMKMQKVMPTVPAAQVAGPPPQPPPIRREITFPPGSVE
ASQPVLKQRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLS
QLSGFLELLVEYFRKCLIDIFGILMEYEVGDPSQKALDHNAVKKDHGWSLADDSGKEDED
AECTDAEEEEEEDEEEASGKAEGEDKSSMALPTPDTVAYPKERPRQASKFDKLPIKIVRK
NNLFVVDRSNRLGRVQEFNSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPSPPSGSTG
RKKEQDGKGDCEEQQEKSIIATIDDVLSARPGALPEEANPGTQAESSKFPFGIHQAKSHR
NIKLLEDEPRSRDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLI
LGKLILLHHEHPERKRAPQTYEKEEAEDKGVACSKEEWWWDCLEVLRDNTLVTLANISGQ
LDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDN
NVDLILATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKG
SIGNLISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSE
FLLHEGRLLDISISAVLNSLVASVICDVLFQIGQL
NT seq
6948 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcgggcgcgggcgggcagcggcgagaggcgggcgcctcccgggccgcggccg
gcgcccggggcccgggacctggaggcgggggcgcgcggcgcggtggcggcggcggcaccg
gggcccgtgctggggggcggcgacggcggcggcccgagtagtgtgcaccaccaccccctg
cacccccgtcacgacctgaacatggcccatagcgcgagcgcggcggccgccgccagcact
ggcagcgccaagagcggcggctcctccgcggctctcacggagggtgcaagcgccgccgcg
ccgccgtcctcctcctcctccgcggcggcggcgtgctcttcctcctcgtcgggcccgggc
tcggccatggagacggggctgctccccaaccacaaactgaaagccgttggcgaggccgcc
gccgcaccgccccagcagcaccaccaccaccgccatgcccaccaccaccaccatgcccac
ctccaccaccaccgccaccacgcactgcagccgctcagccagttccagccgcagcccgct
tccaacagcagcctcggcggcgcggcgcagcccgctcccgacatggagcagccgcaacat
ggaggcgccaaggacagcgccgcgggcagccaggccgaccccccgggccagcctctgctg
agcaagccgggcgacgaggacgacgcgccgcccaagatgggggagccggcgggcggccgc
ttcgagcactcgagcctgagcgccctgggcgcgcagcagccgccggtcgccgtgcccggg
ggcggcggcggcccggcggccggctcggagttcaataattactatggcagcgctgtccct
gctagcggcggccccggcggccgcgctgggccttgctttgatcaacatggcggacaacaa
agccccgggatgggtatgatgcactccgcctcggccgccgccggggcccccagcagcatg
gaccccctgcagaactcccacgaagggtaccccggcagccagtacaaccattatccgggg
nnaggaggaggagcagcgggagccgtggcggcggcggccgcggcggcggcggcagcagca
gcaggaggcggcggcggcggcggcggttatgggggctcgtcctcggggtacggggtgctg
agcgccccgcggcagcagggcggcggcatgatgatgggccccgggggcggcggggccgcg
agcctcagcaaggcggccgccggcgcggcggccgggggcttccagcgcttcgccgggcag
agcccgcacccgtcgggggccaccccgaccctcaaccagctgctcacctcgccgagcccc
atgatgaggagctacggcggcggctaccccgactacagcagccccagcgcgccgccgccg
ccgccgtcgcagccccagtcccaggcggcggcggcggcgggggcggcggcgggcggccag
caggcggccgcgggcatgggcttgggcaaggacctgggcgcccagtacgccgctgccagc
ccggcctgggcggccgcgcaacaaaggagccacccggcgatgagccccggcacccccggc
ccgaccatgggcagatcccagggcagcccaatggatcccatggtgatgaagagacctcag
ttgtatggaatgggcagtaaccctcattctcagcctcagcagagcagcccttacccagga
ggttcctacggccccccaggcccacagcggtatccaatcagcatccaaggtcggacccca
ggggccatgggaggaatgcagtacccacagcagcagatgccacctcagtatggccagcaa
ggtgtgagtggttactgccagcagggccagcagccttactacaaccagcagccgcagcct
ccgcacctccctccgcaggcacagtatctgccctctcagtcccagcagaggtaccagccg
cagcaggacatgtctcaggaaggctatggaactagatctcaacctcctttggcccctgga
aaacctaaccacgaagacttgaacttaatacaacaagaaagaccatcaagtttaccagtt
gaagtcttgacctccgaggataccgcctttggactcaaggacctgtctggctccatcgat
gacctccccacgggaacagaagcggcgttgagctcagcggtcagtgcatccgggtccaca
agcagccaaggggatcagagcaacccggctcagtcccctttctctccacacgcatccccc
cacctctccagcatccctgggggcccttcgccttctcctgtgggctctcctgtagggagc
aaccagtcacggtctggcccaatctctcctgcaagtattccaggcagccagatgcctcct
cagccgcctgggagccaggccgagtccagttcccatcccgccttgagccagtctccaatg
ccgcaggaaagaggttttatggcaggcacacaaagaaaccctcagatgtctcagtatgga
cctcagcaaacaggaccgtccatgtcacctcatccttctcctggaggccagatgcatcct
ggaatcagtagctttcagcagagtaactcaagcgggacttacggtccacagatgagccag
tatggaccacaaggtaactactccagacccccagcatatagtggggtgcccagtgcaagc
tacagcggcccagggcccggcatgggcatcaatgccaacaaccagatgcatgggcaaggg
ccaagccaaccatgtggtgctctgcccctgggacgaatgccatcagctgggatgcagaac
agaccatttcctggaaatatgagcagcatgacccccagttctcctggcatgtctcagcag
ggagggccaggaatggggccaccaatgccaaccgtgaaccgtaaggcacaggaggcagcc
gccgcagtgatgcaggccgctgcaaactcggcacagagcaggcaaggcagctttcctggc
atgaatcagagtggactcctggcttccagttctccctacagccagcccatgaacaacagc
tctgggctaatgaacacccaggcgtccccctacagcatgacgcccaatatggtgaacagc
tcgacagcccctatgggtcttgcagatatgatgtctcctggcgaccccaaactgcccctc
aaagcagacggcaaagaagacggcgctccgcagcctgagagcaagtcgaaggatagctac
agctctcagggtatttctcagcccccaacccccggcaacctgccagtcccttccccaatg
tcccccagctctgctagcatctcctcatttcatggagatgaaagtgatagcattagcagc
ccaggctggccaaagactccatcaagccctaagtccagctcatcctccaccacgggggag
aagatcacaaaggtctatgagttagggaatgagccggagagaaagctgtgggtggaccga
tacctgaccttcatggaggagagaggctctcctgtctccagcctgcctgcggtgggcaag
aagcccttggacctgtttcgcctctacatctgtgtcaaggagattggaggtttggcacag
gttaataaaaacaagaagtggcgtgagctggcaaccaacctcaatgttggcacttcaagc
agcgcagcgagctccctgaaaaagcagtatattcaatacctgtttgccttcgagtgcaag
atcgagcgaggggaggagcccccgcccgaagtgttcagcgctgccgacaccaagaagcag
cccaagctccagccgccctctcctgctaactcaggatccctacaaggtccacagaccccc
cagtcaactggcagtaattcaatggcagaggttccgggggacctgaagccacctacacca
gcctccacccctcatggacagatgaccccaatgcaaggaggaagaagcagtacagtcagt
gtgcacgacccattctcagacgccagtgattcatcgttcccaaaacggaactccatgact
ccgagcaccccataccagcagggcatgagcatgccagatgtgatgagcagggtgccctac
gaacccaacaaggacccctttggtggaatgagaaaagtgcctggaagtagtgagcccttt
atgacccaaggacagatgcccacaagcagtatgcaggacatgtataaccaaagcccctcc
agtgccatgtccgggctgggcatggggcagcgacagcagtttccctatggagccagctat
gatcgaagacatgagccttacgggcagcagtacgcaagccaaggcccgccctcaggacag
ccgccgtatggaggacaccagcccggcctgtacccgcagcagccgaattacaaacgccat
atggacggcatgtacgggccgccagccaaacgccatgagggagacatgtacagcatgcag
tatggcagccagcagcagcaggagatgttcaaccagtacggcagctcttactccgggcca
gaccggaggcccgtgcaggggcagtacccgtacccctacaacagagagcggatgcagggc
cccgggcagatgcagccacacgccatcccgccacagatgctgggcggccccatgccggcg
tcctccagcgaggggccacagcagagtatgtgggcagcgcgcaatgacatgccttacccc
taccagaacaggcagggccccggcggccccgcgcaggcacctccttatccaggcatgagc
cgcacggatgacatgatggtacctgatcaaaggatcaatcacgagagccagtggccttct
catgtcagccagcgtcagccttacatgtcctcttcagcctccatgcagcccatcacgcgc
ccgcctcagtcatcctacccgacggcaccgtcactgccaaaccacatctcccgagcgccc
agccccgcctcctttcagcgctccctggagagccgtatgtctccaagcaagtctcccttc
ctgccctcgatgaagatgcagaaggtcatgcccaccgtccccgcagcccaggtcgcaggg
ccgcccccccagccgcccccgatcagaagggagatcacctttcctccaggttcagtggaa
gcatcacagccagtcctgaaacaaaggcgaaagattacctcaaaagatatcgttactccc
gaggcctggcgtgtaatgatgtcccttaagtcagggcttttggctgaaagtacttgggct
ttggacactattaacattcttctatatgatgacagcactgtcgctactttcaatctttcc
cagttgtccggatttctcgaacttttagtagagtactttagaaaatgcctgattgacatt
tttggaattcttatggaatatgaagtgggagaccccagccaaaaagcacttgatcacaat
gcagtgaagaaagatcacggctggtccttggccgacgactcggggaaggaggacgaagat
gctgaatgtactgatgccgaggaggaggaggaggaggacgaggaggaggccagtgggaag
gcagagggtgaggataagagcagcatggccttgcccacccccgacaccgtggcatatccg
aaggagaggcccaggcaagctagtaagttcgacaagctgccgataaagatcgtcagaaag
aacaacctgtttgtggtggaccggtccaacagactgggccgcgtccaggagttcaacagc
gggcttctgcactggcagcttggagggggggacaccactgagcacatccagactcacttt
gagagcaagatggagatccctccccgcaggcgcccctctcccccttcgggctccacaggc
agaaagaaagagcaggacggaaaaggcgattgcgaagagcagcaagagaaaagcatcatt
gcgaccattgatgacgtcctgtctgctcggccaggggccctgcccgaagaggcgaacccc
ggcacccaggccgagagcagcaagtttcccttcggtatacatcaagccaaaagccaccga
aacatcaagctgctggaggacgagccgcggagccgagacgagactcccctctgcaccatc
gcgcactggcaggattctctggccaagcgctgtatctgtgtgtcaaatattgtccgtagc
ttgtcgtttgtgcctggcaatgacgctgaaatgtccaaacatccaggcttggtgctgatc
ctgggaaagctgattcttcttcaccatgagcatccagagagaaaacgagcaccgcagacc
tatgagaaagaggaggctgaggacaaaggggtggcctgcagcaaggaggagtggtggtgg
gactgcctcgaggtcttaagggataacacgctggtcacgttagccaacatttctgggcag
ctagacttgtctgcttacacggaaagcatctgcttgcccatcctggatggcttgctgcac
tggatggtgtgcccgtctgcagaggcacaggacccctttccaaccgtggggcccaattct
gtcctgtcacctcagagactcgtgctggagaccctctgtaaactcagtatccaggacaac
aatgtggacctgatcttggccacgcctccatttagtcgtcaggagaaattctatgctacg
ttagttaggtacgttggggatcgcaaaaacccagtctgtcgagaaatgtccatggcgctt
ttatcgaaccttgcccaaggggatgcgctggcagctagggcaatagctgtgcagaaggga
agcattggaaacttgataagctttctagaggatggggtcacgatggcgcagtatcaacag
agccagcataacctcatgcacatgcagccccccccgctagagccaccgagcgtggacatg
atgtgcagggcggccaaggctctgttggccatggcccgagtggatgagaaccgctcggaa
ttccttctgcacgagggccgattgctggatatctcaatatcggccgtcctgaactctctg
gttgcgtctgtcatctgtgatgtactgtttcagatcgggcagttatga
DBGET
integrated database retrieval system
