Manis javanica (Malayan pangolin): 108395157
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Entry
108395157 CDS
T06054
Symbol
DDX18
Name
(RefSeq) ATP-dependent RNA helicase DDX18 isoform X1
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
mjv
Manis javanica (Malayan pangolin)
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mjv03041
]
108395157 (DDX18)
03009 Ribosome biogenesis [BR:
mjv03009
]
108395157 (DDX18)
Enzymes [BR:
mjv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108395157 (DDX18)
Spliceosome [BR:
mjv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
108395157 (DDX18)
Ribosome biogenesis [BR:
mjv03009
]
Eukaryotic type
90S particles
Helicases
108395157 (DDX18)
Pre-60S particles
108395157 (DDX18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
BSP_II
Motif
Other DBs
NCBI-GeneID:
108395157
NCBI-ProteinID:
XP_017512694
LinkDB
All DBs
Position
7:complement(98266635..98282075)
Genome browser
AA seq
670 aa
AA seq
DB search
MSHLPMKLLRKKIEKRNLKLRQRNLKLRGASDVSLSETQNGDVSEGRVGGGKVKKSLKQS
MNVDSSEVQYGDVSKETVENVKLKKSPKKPTTLTNGEAAVQCPNSESKKKKKKKKRKLVD
GAGPDTKKTKTEEKEESEDGVQAPEETGNSVGKPYSEEGGSEGPSLPLGLTGAFEDTSFA
SLTDLVNENTLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVEL
IVKLKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEAQKLAN
GINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQT
MLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFL
KKNRKKKLMVFFSSCKSVKYHYELLNYIDLPVLAIHGRQKQNKRTTTFFQFCNADSGILL
CTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEELGFLRY
LKQSKVPLSEFEFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKSYIRAYDSHSLKQIFN
VNNLNLPQVALSFGFKVPPFVDLNVNSNEGKLKKRGGGGGFGYQKAKKVQKSKIFKHISK
KSSDSRQFSH
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatctgccgatgaaactgctgcgcaagaagatcgagaaacggaacctcaaactg
cggcagcgaaacctgaagctacggggggcctcggatgtgagcctatcagaaactcaaaat
ggagatgtgtctgaaggaagagtgggaggtggaaaagttaaaaaatccctgaaacagtct
atgaatgtggactcgtcagaagtccagtatggagatgtatctaaagaaacagtggaaaat
gtaaaacttaaaaaatcccccaagaaacccaccacattaaccaatggggaagcagcagtg
cagtgtcccaattcagaatcaaaaaagaaaaagaagaagaaaaaaagaaaactggtggat
ggtgctgggcctgataccaaaaaaacaaaaactgaagaaaaagaagaatctgaagatggt
gtccaggcccctgaagaaacaggaaacagtgtggggaagccatactcagaggaaggtggc
agtgaggggcccagcctgcccctgggactgacaggagcttttgaagatacctcatttgct
tctctaactgatcttgtcaatgagaacactctgaaggcaataaaagaaatgggctttaca
aacatgactgaaattcaacataaaagtatcagaccacttctggaaggcagggatcttcta
gcagctgcaaaaacaggcagtggcaaaaccctagcgtttctcatccctgcagttgagctc
attgttaagttaaagttcatgcccaggaatggaacaggagtccttattctctcacctact
agggaacttgccatgcagacttttggcgttcttaaggagctaatgacacaccacgtacac
acgtatgggctgataatgggtggcagtaacagatctgctgaagcccaaaaacttgctaat
gggatcaacatcattgtggccacaccaggccgtctcctggaccacatgcagaatacccca
gggtttatgtataaaaacctacagtgtcttgttattgatgaggctgatcgtatattggat
gttggatttgaagaagaattaaagcaaattattaaacttctgccaacacgcagacagacc
atgctcttttctgccacacaaactcgaaaagttgaagacctggcgaggatttctctgaaa
aaggagccgttgtatgttggtgttgatgatgataaagctaatgcaacagtggatggtctt
gagcagggttatgttgtttgtccctctgaaaagagattcctcctgctctttacattcctt
aagaaaaaccggaaaaagaaactgatggtcttcttttcatcctgtaagtctgtgaaatac
cactatgagttgctgaattacatcgatttgcctgtcttggctattcatggaaggcagaag
caaaataagcgtacaaccacatttttccagttctgcaacgcagattcagggatattactg
tgtacagatgttgcagctagagggttggatattcctgaagtcgactggattgttcagtac
gaccctccagatgaccccaaggaatatattcatcgtgtaggtagaacagccagaggcctg
aacggaagagggcatgccttgctcattttgcgccctgaagaattgggtttccttcgttat
ttgaagcagtccaaggtaccattaagtgaatttgagttttcctggtccaaaatttctgac
atccagtctcagcttgaaaaattgattgaaaagaactacttccttcataagtcagcccag
gaggcatataagtcatatattagagcatatgattcccattctctgaaacagatctttaat
gttaacaacttaaatttgcctcaggttgctctgtcatttggtttcaaggtgcctcctttt
gttgacctgaatgtgaacagcaatgaaggcaagcttaaaaagaggggaggaggtggtgga
tttggctaccagaaagccaaaaaagttcagaagtccaaaatcttcaaacacattagcaag
aagtcctccgacagcaggcagttctctcattga
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