Manis javanica (Malayan pangolin): 108395182
Help
Entry
108395182 CDS
T06054
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv04151
PI3K-Akt signaling pathway
mjv04382
Cornified envelope formation
mjv04510
Focal adhesion
mjv04512
ECM-receptor interaction
mjv04518
Integrin signaling
mjv04820
Cytoskeleton in muscle cells
mjv04926
Relaxin signaling pathway
mjv04933
AGE-RAGE signaling pathway in diabetic complications
mjv04974
Protein digestion and absorption
mjv05146
Amoebiasis
mjv05165
Human papillomavirus infection
mjv05200
Pathways in cancer
mjv05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
108395182 (COL4A6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108395182 (COL4A6)
04518 Integrin signaling
108395182 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108395182 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
108395182 (COL4A6)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
108395182 (COL4A6)
09154 Digestive system
04974 Protein digestion and absorption
108395182 (COL4A6)
09158 Development and regeneration
04382 Cornified envelope formation
108395182 (COL4A6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
108395182 (COL4A6)
09162 Cancer: specific types
05222 Small cell lung cancer
108395182 (COL4A6)
09172 Infectious disease: viral
05165 Human papillomavirus infection
108395182 (COL4A6)
09174 Infectious disease: parasitic
05146 Amoebiasis
108395182 (COL4A6)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
108395182 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mjv04147
]
108395182 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
mjv00536
]
108395182 (COL4A6)
Exosome [BR:
mjv04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
108395182 (COL4A6)
Glycosaminoglycan binding proteins [BR:
mjv00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108395182 (COL4A6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
108395182
NCBI-ProteinID:
XP_036847289
LinkDB
All DBs
Position
X:complement(99291011..99548990)
Genome browser
AA seq
1706 aa
AA seq
DB search
MHPGLWLLLITLCLTEELAGAGEKKSLGKPCGGQDCSGGCKCIPEKGGRGQPGPIGIQGP
TGPQGIPGPSGLSGLKGERGSPGPLGSYGPKGDKGPMGVPGFLGINGIPGHPGQPGPRGP
PGLDGCNGTQGAVGFPGPDGYPGLLGLPGLPGQKGSKGEPVLAQGGLKGVKGKPGLPGLA
GIAGPQGAPGSLGAAGPMGPSGLEGPPGPPGFLGPDGNMGLGFQGEKGVKGDVGLPGPAG
PPPSTGELEFMGFPKGKKGSKGEPGLQGFPGISGPPGFPGFGTAGEKGEKGIPGLPGPRG
PTGLEGAQGPPGSQGKKGSSGFPGLKGFPGIKGEKGGVGLPGPDVLIDTDGAVISGYPGD
PGMPGLPGLKGDEGIQGLPGPPGSSGLPALPGVRGALGPQGVPGMKGYQGNPGHSTVGAT
GLPGRDGFQGLPGLPGLPGPAFDTGTLQNTEPGFPGLRGERGPKGHPGLKGIKGDSGFCA
CDGGAPNTGPPGELGLPGPPGLVGLPGIKGTRGDPGSGGTQGPSGAPGLFGPQGPAGPKG
EKGDPTITTESGMPGEQGDLGSQGLPGPIGAPGKAGIPGFPGLPGLPGDGGPGFPGEKGF
PGPPGEKGHSGPTGPPGIGLPGSPGPRGLPGDQGINGLPGQQGLPGRPGDCCCRKKVGEG
DLDPEGGITLPCIIPGSYGPSGFPGAPGFPGPKGVYGLPGSPGQPGSRGNKGKPGSPGLV
HLPELPGFPGLHGEQGLPGFLGLPGKDGLPGEGGSPGLPGSKGAPGDILGAENGAPGKQG
LPGLPGDRGFSGDTGLPGSKGLLGKSGLLGPKGERGRPGTPGHMGPPGTPGSGGLFGVKG
KPGLPGAPGFPGTSGHPGKKGPRGETGPPAPPGKGGLPGLKGLPGSPGLIGFLGNSGLPG
GAGLPGLPGPKGEKGSVGPTGFSGMPGVPGIPGVSGLKGIPGSEGRMGPSGLAGRPGEKG
DRGNPGLLGIPSPRPPMLKLQFKGDKGSWGSAGSDGFPGPRGDKGEAGFPGPPGLPGPPG
FPSTVKGLIGRPGPPGSTGLRGLPGLKGSPGITGFPGIPGESGSQGLNGAPGLPGASGLP
GLKGDQGQTLGISGSPGPKGQPGESGFQGVKGKGGPVGDAGFPGNKGEDGKVGISGDTGL
PGSPGLPGIPGMRGNPGLPGPPGHPGATGPLGPPGLTGTKGFPGYPGLHGLNGLPGTKGT
HGNPGPSITGVPGPAGLPGPKGEKGSPGIDIGPPGKPGMRGQKGGQGFPGLQGPAGLPGA
PGLSLPSVIAGQPGDPGRPGLDGERGRPGPPGPSGPPGPSSDQGDPGDPGFPGIPGPQGP
KGDQGIPGFSGLPGELGLKGMRGEPGFMGIPGKVGLPGDPGFPGIKGKAGPRGSSGPQGA
PGQTPVAEAVQVPPGPMGLPGIDGIPGLTGDSGVQGLVGLQGSKGLPGIPGKDGLSGLSG
PPGALGDPGLLGLQGPPGFEGARGKQGPFGRAGLPGQSVRVGYTLVKHSQSEQVPLCPVG
MSQLWVGYSLLFVEGQEKAHNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWL
STTAPIPMMPVGQTQIPQYISRCSVCEAPSQAIAVHSQDITIPQCPLGWSSLWIGYSFLM
HTAAGAEGGGQSLVSPGSCLEDFRATPFIECSGARGTCHYFANKYSFWLTTVEERQQFWE
EPVSETLKAGQLHTRVSRCQVCMKSL
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atgcaccctggattgtggctgctcctgattacgttgtgcctgaccgaggaactggcagga
gcgggagagaagaagtcccttggaaagccatgtgggggccaagactgcagtggaggctgt
aaatgcattcctgagaaaggaggcagagggcaaccgggaccaattggaattcaaggtcca
acaggtcctcaaggaattcctggccctagtggtttatcagggttgaaaggggaaaggggc
tccccaggccctctgggatcatatggaccaaaaggagataaggggcccatgggagttcct
ggttttcttggcatcaatgggattccgggccaccctggacaaccgggacccagaggccca
cctggcctggatggctgtaatggaactcagggagctgttggatttccaggccctgatggc
tatcctggacttctcggactacccgggcttcctggtcagaaaggctctaaaggtgaacct
gtccttgcccaaggtggtttgaaaggagtgaaggggaaacctggcctgcctggactggct
ggaattgctggcccacaaggagcacccggatctctaggagctgcaggacccatggggcca
tcaggattggaaggtcctccaggaccccctggcttccttggtcctgatgggaatatgggg
ttaggtttccaaggagagaaaggagtcaagggggatgttggccttcctggccctgcagga
cccccaccatctactggggagctggaatttatgggatttcccaaagggaaaaaaggatcc
aagggtgaaccagggcttcaaggctttccaggaataagcggccctccaggcttcccagga
tttggaactgctggagaaaagggagaaaaaggaatccctggtttgccaggacctaggggt
cccacgggtttagaaggagcccaaggccctccagggagtcagggcaaaaaagggtcctca
ggttttccagggcttaaaggattcccaggaattaagggtgaaaagggtggcgttggcctg
ccaggcccagatgttctcattgatacagatggtgctgtgatctcaggttatcctggagac
cccggtatgccaggcctcccaggccttaaaggagatgaaggcatccagggcctgcctggc
cctcctggcagctctggcttaccagctttaccaggtgtccgaggtgccctagggccccag
ggagttccaggtatgaaggggtaccaaggaaacccaggccactccacagttggggcaact
ggtctcccgggaagagatggttttcaaggcctaccaggcctaccaggcctgcctggtcca
gcatttgacactggaaccctacagaacacagagccagggttccctggtctccgaggagaa
cgaggtccaaaaggacaccccggcctcaaaggaataaaaggggactcagggttttgtgct
tgtgatggtggtgcccccaacactggaccacccggggagctggggctgcctgggccacca
ggtctcgtgggccttccaggcattaaaggaaccagaggagatccaggctctgggggtaca
cagggcccttcaggggctccaggtttatttggacctcaaggtcccgcaggccccaaagga
gagaaaggggacccaaccatcactacagaatcagggatgccaggggagcagggtgatctt
ggctcccagggactccctggtccaataggagctccgggcaaggctggaataccaggtttc
ccaggtctgccaggccttccgggtgatggtggaccgggcttcccaggtgaaaaggggttt
ccaggacctcctggtgaaaaaggccatagtggtccaactggccccccaggaattgggcta
ccaggatctcctggacctcgtgggcttcctggagatcaaggcatcaatggattaccaggg
caacaaggcctccctgggcgtccaggtgactgctgctgcaggaagaaggttggtgaagga
gacttagacccagagggagggatcaccttgccttgtattattcctgggtcatatggtcca
tcaggattcccaggagctcccggattcccaggccctaaaggggtttatggtctccctggg
agtcctggccaacctggatcacgtggtaataaaggaaagcccggaagtccaggattggtt
cacctccctgaattgccaggatttcctggactccatggagagcagggcttaccagggttt
cttgggctccccggaaaagatggcttgcctggggaaggtggaagtccaggcttaccaggt
tccaagggagcccctggtgacatccttggtgctgaaaatggtgctccagggaagcaaggc
ctaccagggttgccaggggacagaggattttctggagatactggccttccaggatccaag
ggtttgcttgggaagtcgggcttgcttggccccaaaggtgagcggggcaggcctggaaca
ccaggccacatgggccctccaggcactccagggtctggtggtctattcggcgtcaagggc
aaacccggactcccaggagcaccaggctttccaggcacttcaggacatcctggaaagaaa
ggtccaagaggagagacaggtccccctgcaccacctggaaagggaggtctgcctggcctg
aaaggccttcctggatctccagggctaattggcttcctggggaactcaggcttgccagga
ggcgctgggttgccaggcctgccgggtccaaagggtgagaaggggtctgttggaccaaca
ggcttttcaggcatgccaggtgtccctggaattcctggtgtgagtggattaaagggaatc
cctgggtcagaaggaagaatggggccatctggactggctggtaggcctggtgaaaaagga
gacagaggcaacccagggttacttggaatacccagtcccagacctccaatgctgaaactt
cagttcaaaggagacaaaggctcttggggctcagctggatctgacggatttcctgggccc
agaggtgacaaaggagaggctggcttccctgggccaccaggcttgcctggacctcctggc
ttccccagcaccgtcaagggacttattgggagaccaggcccccctggctccacaggactc
cggggcttacctggcctgaaggggtcccctggaatcacaggtttcccaggaataccagga
gaaagtggttcacagggtctcaatggagcaccggggctcccaggagcatctggtctccca
ggtttaaaaggagatcaaggccagactcttggaatttctggtagtccgggacccaaggga
caacctggggagtctggttttcaaggtgtgaaaggaaaaggtggaccagttggtgatgcg
ggttttccaggaaacaaaggtgaagatggaaaagttggtatttctggagatactggcctt
cctggctccccaggactgcccgggattccaggcatgagaggaaatccaggacttccaggt
cctccaggccatccaggggcaactgggcccctgggaccccctggcttaacaggaaccaaa
ggttttcctggatatcctggtttacatggactgaatgggcttccaggaacgaaggggacc
catggaaatccaggacctagtataaccggtgtgcctgggccagctggcctgcctggtcct
aaaggggaaaaaggttctccaggaattgacatcggacctccagggaagccaggcatgaga
ggacaaaaaggaggccaaggtttcccaggtctccaaggccctgccggtctccccggtgcc
ccaggcctctccttgccctcagtcatagcaggacagcctggtgaccctgggcggccaggc
ctggatggagaacgaggccgcccaggccccccgggaccctcaggcccccctgggccatcc
tcagatcaaggcgaccctggagaccctggcttccctggaattcctggccctcaagggccc
aagggagaccaaggaattcctggtttctctggcctccctggagagctagggctgaaaggc
atgagaggtgagcctggcttcatggggattccaggcaaggttgggctgcctggagaccca
ggatttcccgggattaaggggaaggcagggccaagaggctcttctggcccccaaggtgct
cctggacaaacaccagttgcggaagctgtccaggtgcctcctggacccatgggtctacca
ggcatcgatggcattcctggcctcacaggggactctggggttcaaggccttgtaggcctg
caaggctccaagggtttacctggcattcctggcaaagacggcctcagcggactctccggc
ccacctggggctcttggtgatcctggtctccttggactacaaggccctccaggatttgaa
ggagctcgtggaaagcagggcccctttgggagggctggactgcctgggcagagtgtgaga
gtgggctacaccttggtgaaacacagccagtcagaacaggtgcccctgtgccccgtcggg
atgagccagctgtgggtgggttacagtttgctgtttgtggaagggcaggagaaagcccac
aaccaggacctggggtttgctggctcctgcctgccccgcttcagcaccatgccattcatc
tactgcaacatcaacgaagtgtgccactatgccaggcgcaatgataaatcctactggctc
tccaccactgctcccattcctatgatgcccgtcggccagacccagattccacagtacatc
agccgctgctctgtgtgtgaggcaccctcgcaagctattgctgtgcacagccaggacatc
accatcccgcagtgtccactgggctggagcagcctctggatcgggtactccttccttatg
cacaccgccgccggcgcggagggagggggccagtccctggtctcccccggctcctgcctg
gaggattttcgcgccactcctttcatcgagtgcagtggtgcccgaggcacctgccactac
tttgccaacaagtacagtttctggttgacgacagtggaggagaggcagcaattctgggag
gagccagtatctgaaacactgaaagcagggcagctccacacccgggttagccgctgccag
gtgtgtatgaaaagcctgtag
DBGET
integrated database retrieval system
